RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 PCP4P48539 62 aa2.37□□□□□ -2.03
LINC01140-208ENST00000587165 KRTAP3-1Q9BYR8 98 aa2.37□□□□□ -2.03
LINC01140-208ENST00000587165 USH2AO75445 5202 aa2.37□□□□□ -2.03
LINC01140-208ENST00000587165 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.36□□□□□ -2.03
LINC01140-208ENST00000587165 LINC00208Q96KT6 92 aa2.36□□□□□ -2.03
LINC01140-208ENST00000587165 H3BPC8 53 aa2.35□□□□□ -2.03
LINC01140-208ENST00000587165 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
LINC01140-208ENST00000587165 IMUPQ9GZP8 106 aa2.35□□□□□ -2.03
LINC01140-208ENST00000587165 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.03
LINC01140-208ENST00000587165 KLKP1Q107X0 134 aa2.34□□□□□ -2.03
LINC01140-208ENST00000587165 CRIPTQ9P021 101 aa2.34□□□□□ -2.03
LINC01140-208ENST00000587165 SSPOA2VEC9 5147 aa2.33□□□□□ -2.04
LINC01140-208ENST00000587165 KRTAP19-4Q3LI73 84 aa2.33□□□□□ -2.04
LINC01140-208ENST00000587165 Q5VV11 94 aa2.33□□□□□ -2.04
LINC01140-208ENST00000587165 OCR1Q9BZK8 76 aa2.33□□□□□ -2.04
LINC01140-208ENST00000587165 FCGBPQ9Y6R7 5405 aaPredicted RBP2.33□□□□□ -2.04
LINC01140-208ENST00000587165 K7ERU9 68 aa2.32□□□□□ -2.04
LINC01140-208ENST00000587165 SMIM20Q8N5G0 67 aa2.32□□□□□ -2.04
LINC01140-208ENST00000587165 H0YAA0 97 aa2.31□□□□□ -2.04
LINC01140-208ENST00000587165 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
LINC01140-208ENST00000587165 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
LINC01140-208ENST00000587165 A6NN06 94 aa2.3□□□□□ -2.04
LINC01140-208ENST00000587165 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
LINC01140-208ENST00000587165 ADM2Q7Z4H4 148 aa2.28□□□□□ -2.04
LINC01140-208ENST00000587165 SPTSSBQ8NFR3 76 aa2.28□□□□□ -2.04
LINC01140-208ENST00000587165 DMAC1Q96GE9 116 aa2.28□□□□□ -2.04
LINC01140-208ENST00000587165 TRAV7A0A075B6U4 112 aa2.27□□□□□ -2.05
LINC01140-208ENST00000587165 MT-ATP8P03928 68 aa2.27□□□□□ -2.05
LINC01140-208ENST00000587165 MT1BP07438 61 aa2.26□□□□□ -2.05
LINC01140-208ENST00000587165 ACYP2P14621 99 aa2.26□□□□□ -2.05
LINC01140-208ENST00000587165 R4GN34 69 aa2.26□□□□□ -2.05
LINC01140-208ENST00000587165 SYNE2Q8WXH0 6885 aaKnown RBP2.25□□□□□ -2.05
LINC01140-208ENST00000587165 CHKB-CPT1BH3BT56 60 aa2.25□□□□□ -2.05
LINC01140-208ENST00000587165 PLAC4Q8WY50 150 aa2.24□□□□□ -2.05
LINC01140-208ENST00000587165 PRO2289Q9P1D8 64 aa2.24□□□□□ -2.05
LINC01140-208ENST00000587165 MACF1Q9UPN3 7388 aaKnown RBP2.24□□□□□ -2.05
LINC01140-208ENST00000587165 M0QZ58 72 aa2.23□□□□□ -2.05
LINC01140-208ENST00000587165 KRTAP10-5P60370 271 aa2.23□□□□□ -2.05
LINC01140-208ENST00000587165 KRTAP6-3Q3LI67 103 aa2.23□□□□□ -2.05
LINC01140-208ENST00000587165 A0A0A0MQY5 61 aa2.2□□□□□ -2.06
LINC01140-208ENST00000587165 P0C880 135 aa2.2□□□□□ -2.06
LINC01140-208ENST00000587165 LINC01554Q52M75 96 aa2.2□□□□□ -2.06
LINC01140-208ENST00000587165 SERP2Q8N6R1 65 aa2.2□□□□□ -2.06
LINC01140-208ENST00000587165 SPANXA2-OT1Q8N9U9 137 aa2.2□□□□□ -2.06
LINC01140-208ENST00000587165 SNURFQ9Y675 71 aa2.2□□□□□ -2.06
LINC01140-208ENST00000587165 NEBP20929 6669 aa2.15□□□□□ -2.06
LINC01140-208ENST00000587165 SEC61GP60059 68 aa2.15□□□□□ -2.07
LINC01140-208ENST00000587165 LOC100996750A0A140TA64 210 aa2.13□□□□□ -2.07
LINC01140-208ENST00000587165 COX7CP15954 63 aa2.13□□□□□ -2.07
LINC01140-208ENST00000587165 MT1XP80297 61 aa2.13□□□□□ -2.07
LINC01140-208ENST00000587165 COA5Q86WW8 74 aa2.13□□□□□ -2.07
LINC01140-208ENST00000587165 KRTAP4-6Q9BYQ5 205 aa2.13□□□□□ -2.07
LINC01140-208ENST00000587165 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
LINC01140-208ENST00000587165 KRTAP5-9P26371 169 aa2.11□□□□□ -2.07
LINC01140-208ENST00000587165 KRTAP12-2P59991 146 aa2.11□□□□□ -2.07
LINC01140-208ENST00000587165 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
LINC01140-208ENST00000587165 CAMK2N1Q7Z7J9 78 aa2.1□□□□□ -2.07
LINC01140-208ENST00000587165 SPRR2FQ96RM1 72 aa2.09□□□□□ -2.07
LINC01140-208ENST00000587165 ANAPC13Q9BS18 74 aa2.09□□□□□ -2.07
LINC01140-208ENST00000587165 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
LINC01140-208ENST00000587165 KMT2DO14686 5537 aa2.07□□□□□ -2.08
LINC01140-208ENST00000587165 H7BZZ5 65 aa2.07□□□□□ -2.08
LINC01140-208ENST00000587165 CYSTM1Q9H1C7 97 aa2.07□□□□□ -2.08
LINC01140-208ENST00000587165 CCDC179H3BU77 68 aa2.06□□□□□ -2.08
LINC01140-208ENST00000587165 SPRR2EP22531 72 aa2.06□□□□□ -2.08
LINC01140-208ENST00000587165 SPRR2BP35325 72 aa2.06□□□□□ -2.08
LINC01140-208ENST00000587165 SPRR2AP35326 72 aa2.06□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP4-12Q9BQ66 201 aa2.06□□□□□ -2.08
LINC01140-208ENST00000587165 A0A0D9SG42 100 aa2.05□□□□□ -2.08
LINC01140-208ENST00000587165 A0A1B0GU33 70 aa2.05□□□□□ -2.08
LINC01140-208ENST00000587165 A0A1B0GU69 56 aa2.05□□□□□ -2.08
LINC01140-208ENST00000587165 ATP5EP56381 51 aaPredicted RBP2.05□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP4-8Q9BYQ9 185 aa2.05□□□□□ -2.08
LINC01140-208ENST00000587165 MUC12Q9UKN1 5478 aa2.05□□□□□ -2.08
LINC01140-208ENST00000587165 MDN1Q9NU22 5596 aa2.04□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP13-4Q3LI77 160 aa2.04□□□□□ -2.08
LINC01140-208ENST00000587165 SMIM26A0A096LP01 95 aa2.03□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP10-7P60409 375 aaPredicted RBP2.03□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP10-12P60413 245 aa2.03□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP15-1Q3LI76 137 aa2.03□□□□□ -2.08
LINC01140-208ENST00000587165 SPINT4Q6UDR6 99 aa2.03□□□□□ -2.08
LINC01140-208ENST00000587165 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
LINC01140-208ENST00000587165 KRTAP2-3P0C7H8 128 aa2.02□□□□□ -2.09
LINC01140-208ENST00000587165 SPATA8Q6RVD6 105 aa2.02□□□□□ -2.09
LINC01140-208ENST00000587165 KRTAP2-4Q9BYR9 128 aa2.02□□□□□ -2.09
LINC01140-208ENST00000587165 KRTAP4-8A0A0G2JLE6 195 aa2.01□□□□□ -2.09
LINC01140-208ENST00000587165 SPRR2DP22532 72 aa2□□□□□ -2.09
LINC01140-208ENST00000587165 LCE1AQ5T7P2 110 aa2□□□□□ -2.09
LINC01140-208ENST00000587165 LCE4AQ5TA78 99 aa2□□□□□ -2.09
LINC01140-208ENST00000587165 TMEM258P61165 79 aa1.98□□□□□ -2.09
LINC01140-208ENST00000587165 LCE3BQ5TA77 95 aa1.97□□□□□ -2.09
LINC01140-208ENST00000587165 KRTAP12-1P59990 96 aa1.96□□□□□ -2.1
LINC01140-208ENST00000587165 KRTAP9-9Q9BYP9 154 aa1.96□□□□□ -2.1
LINC01140-208ENST00000587165 KRTAP9-4Q9BYQ2 154 aa1.96□□□□□ -2.1
LINC01140-208ENST00000587165 KRTAP2-2Q9BYT5 123 aa1.95□□□□□ -2.1
LINC01140-208ENST00000587165 KRTAP2-1Q9BYU5 128 aa1.95□□□□□ -2.1
LINC01140-208ENST00000587165 A8MU10 97 aa1.94□□□□□ -2.1
LINC01140-208ENST00000587165 LINC01558Q9Y6Z2 57 aa1.94□□□□□ -2.1
LINC01140-208ENST00000587165 UQCR11O14957 56 aa1.93□□□□□ -2.1
LINC01140-208ENST00000587165 TNP1P09430 55 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms