RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
SMARCA4-210ENST00000586892 SMIM20Q8N5G0 67 aa6.13□□□□□ -1.43
SMARCA4-210ENST00000586892 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
SMARCA4-210ENST00000586892 A8MUN3 132 aa6.12□□□□□ -1.43
SMARCA4-210ENST00000586892 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
SMARCA4-210ENST00000586892 H3BPC8 53 aa6.1□□□□□ -1.43
SMARCA4-210ENST00000586892 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
SMARCA4-210ENST00000586892 TRAV7A0A075B6U4 112 aa6.08□□□□□ -1.44
SMARCA4-210ENST00000586892 NDUFC1O43677 76 aa6.06□□□□□ -1.44
SMARCA4-210ENST00000586892 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
SMARCA4-210ENST00000586892 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
SMARCA4-210ENST00000586892 SERP2Q8N6R1 65 aa6.02□□□□□ -1.45
SMARCA4-210ENST00000586892 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
SMARCA4-210ENST00000586892 H0YAA0 97 aa5.99□□□□□ -1.45
SMARCA4-210ENST00000586892 ANAPC13Q9BS18 74 aa5.98□□□□□ -1.45
SMARCA4-210ENST00000586892 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
SMARCA4-210ENST00000586892 DMAC1Q96GE9 116 aa5.96□□□□□ -1.46
SMARCA4-210ENST00000586892 Q5VV11 94 aa5.95□□□□□ -1.46
SMARCA4-210ENST00000586892 COX7CP15954 63 aa5.94□□□□□ -1.46
SMARCA4-210ENST00000586892 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
SMARCA4-210ENST00000586892 C20orf197Q8N268 126 aa5.94□□□□□ -1.46
SMARCA4-210ENST00000586892 SNURFQ9Y675 71 aa5.92□□□□□ -1.46
SMARCA4-210ENST00000586892 MACF1Q9UPN3 7388 aaKnown RBP5.92□□□□□ -1.46
SMARCA4-210ENST00000586892 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
SMARCA4-210ENST00000586892 MT1BP07438 61 aa5.91□□□□□ -1.46
SMARCA4-210ENST00000586892 ADM2Q7Z4H4 148 aa5.9□□□□□ -1.46
SMARCA4-210ENST00000586892 ACYP2P14621 99 aa5.85□□□□□ -1.47
SMARCA4-210ENST00000586892 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
SMARCA4-210ENST00000586892 A6NN06 94 aa5.83□□□□□ -1.48
SMARCA4-210ENST00000586892 CCDC179H3BU77 68 aa5.8□□□□□ -1.48
SMARCA4-210ENST00000586892 P0C880 135 aa5.77□□□□□ -1.49
SMARCA4-210ENST00000586892 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
SMARCA4-210ENST00000586892 SPTSSBQ8NFR3 76 aa5.77□□□□□ -1.49
SMARCA4-210ENST00000586892 SPANXA2-OT1Q8N9U9 137 aa5.76□□□□□ -1.49
SMARCA4-210ENST00000586892 R4GN34 69 aa5.76□□□□□ -1.49
SMARCA4-210ENST00000586892 CHKB-CPT1BH3BT56 60 aa5.73□□□□□ -1.49
SMARCA4-210ENST00000586892 H7BZZ5 65 aa5.73□□□□□ -1.49
SMARCA4-210ENST00000586892 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
SMARCA4-210ENST00000586892 CYSTM1Q9H1C7 97 aa5.73□□□□□ -1.49
SMARCA4-210ENST00000586892 M0QZ58 72 aa5.7□□□□□ -1.5
SMARCA4-210ENST00000586892 PCP4P48539 62 aa5.68□□□□□ -1.5
SMARCA4-210ENST00000586892 KRTAP6-3Q3LI67 103 aa5.67□□□□□ -1.5
SMARCA4-210ENST00000586892 PLAC4Q8WY50 150 aa5.67□□□□□ -1.5
SMARCA4-210ENST00000586892 ATP5EP56381 51 aaPredicted RBP5.66□□□□□ -1.5
SMARCA4-210ENST00000586892 TMEM258P61165 79 aa5.64□□□□□ -1.51
SMARCA4-210ENST00000586892 PRO2289Q9P1D8 64 aa5.64□□□□□ -1.51
SMARCA4-210ENST00000586892 LINC01554Q52M75 96 aa5.61□□□□□ -1.51
SMARCA4-210ENST00000586892 COA5Q86WW8 74 aa5.6□□□□□ -1.51
SMARCA4-210ENST00000586892 MT1XP80297 61 aa5.58□□□□□ -1.52
SMARCA4-210ENST00000586892 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
SMARCA4-210ENST00000586892 KMT2DO14686 5537 aa5.51□□□□□ -1.53
SMARCA4-210ENST00000586892 KRTAP5-9P26371 169 aa5.48□□□□□ -1.53
SMARCA4-210ENST00000586892 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
SMARCA4-210ENST00000586892 SEC61GP60059 68 aa5.46□□□□□ -1.54
SMARCA4-210ENST00000586892 NEBP20929 6669 aa5.45□□□□□ -1.54
SMARCA4-210ENST00000586892 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
SMARCA4-210ENST00000586892 KRTAP13-4Q3LI77 160 aa5.43□□□□□ -1.54
SMARCA4-210ENST00000586892 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
SMARCA4-210ENST00000586892 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
SMARCA4-210ENST00000586892 A0A1B0GU33 70 aa5.33□□□□□ -1.56
SMARCA4-210ENST00000586892 A0A1B0GU69 56 aa5.33□□□□□ -1.56
SMARCA4-210ENST00000586892 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
SMARCA4-210ENST00000586892 KRTAP10-7P60409 375 aaPredicted RBP5.32□□□□□ -1.56
SMARCA4-210ENST00000586892 PRR15LQ9BU68 103 aa5.32□□□□□ -1.56
SMARCA4-210ENST00000586892 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
SMARCA4-210ENST00000586892 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
SMARCA4-210ENST00000586892 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
SMARCA4-210ENST00000586892 RPS28P62857 69 aaKnown RBP5.29□□□□□ -1.56
SMARCA4-210ENST00000586892 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SMARCA4-210ENST00000586892 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
SMARCA4-210ENST00000586892 SMIM26A0A096LP01 95 aa5.28□□□□□ -1.56
SMARCA4-210ENST00000586892 A0A0D9SG42 100 aa5.28□□□□□ -1.56
SMARCA4-210ENST00000586892 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
SMARCA4-210ENST00000586892 V9GYY9 64 aa5.28□□□□□ -1.56
SMARCA4-210ENST00000586892 SPRR2EP22531 72 aa5.22□□□□□ -1.57
SMARCA4-210ENST00000586892 SPRR2BP35325 72 aa5.22□□□□□ -1.57
SMARCA4-210ENST00000586892 SPRR2AP35326 72 aa5.22□□□□□ -1.57
SMARCA4-210ENST00000586892 Q1T7F1 81 aa5.21□□□□□ -1.58
SMARCA4-210ENST00000586892 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.58
SMARCA4-210ENST00000586892 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
SMARCA4-210ENST00000586892 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
SMARCA4-210ENST00000586892 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
SMARCA4-210ENST00000586892 PSPHP1O15172 72 aa5.16□□□□□ -1.58
SMARCA4-210ENST00000586892 A8MU10 97 aa5.11□□□□□ -1.59
SMARCA4-210ENST00000586892 UQCR11O14957 56 aa5.11□□□□□ -1.59
SMARCA4-210ENST00000586892 KRTAP2-3P0C7H8 128 aa5.1□□□□□ -1.59
SMARCA4-210ENST00000586892 KRTAP2-4Q9BYR9 128 aa5.1□□□□□ -1.59
SMARCA4-210ENST00000586892 A6NED7 52 aa5.05□□□□□ -1.6
SMARCA4-210ENST00000586892 SPRR2DP22532 72 aa5.04□□□□□ -1.6
SMARCA4-210ENST00000586892 MIR22HGQ0VDD5 57 aa5.03□□□□□ -1.6
SMARCA4-210ENST00000586892 KRTAP19-7Q3SYF9 63 aa4.99□□□□□ -1.61
SMARCA4-210ENST00000586892 MT1EP04732 61 aa4.94□□□□□ -1.62
SMARCA4-210ENST00000586892 KRTAP2-2Q9BYT5 123 aa4.94□□□□□ -1.62
SMARCA4-210ENST00000586892 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
SMARCA4-210ENST00000586892 C10orf95Q9H7T3 257 aa4.94□□□□□ -1.62
SMARCA4-210ENST00000586892 K7ERS5 55 aa4.93□□□□□ -1.62
SMARCA4-210ENST00000586892 TNP1P09430 55 aa4.93□□□□□ -1.62
SMARCA4-210ENST00000586892 LCE3BQ5TA77 95 aa4.9□□□□□ -1.63
SMARCA4-210ENST00000586892 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
SMARCA4-210ENST00000586892 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms