RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
RBFOX1-222ENST00000585867 SMIM26A0A096LP01 95 aa8.9□□□□□ -0.98
RBFOX1-222ENST00000585867 SPTSSBQ8NFR3 76 aa8.9□□□□□ -0.98
RBFOX1-222ENST00000585867 S4R3F8 94 aa8.87□□□□□ -0.99
RBFOX1-222ENST00000585867 LCE2AQ5TA79 106 aaPredicted RBP8.85□□□□□ -0.99
RBFOX1-222ENST00000585867 MT1HP80294 61 aa8.84□□□□□ -0.99
RBFOX1-222ENST00000585867 LCA10Q71F78 164 aa8.79□□□□□ -1
RBFOX1-222ENST00000585867 V9GYY9 64 aa8.79□□□□□ -1
RBFOX1-222ENST00000585867 M0R2T5 61 aa8.74□□□□□ -1.01
RBFOX1-222ENST00000585867 Q1T7F1 81 aa8.73□□□□□ -1.01
RBFOX1-222ENST00000585867 KRTAP3-3Q9BYR6 98 aa8.72□□□□□ -1.01
RBFOX1-222ENST00000585867 LINC01558Q9Y6Z2 57 aa8.69□□□□□ -1.02
RBFOX1-222ENST00000585867 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
RBFOX1-222ENST00000585867 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
RBFOX1-222ENST00000585867 PRR15LQ9BU68 103 aa8.63□□□□□ -1.03
RBFOX1-222ENST00000585867 SEC61GP60059 68 aa8.62□□□□□ -1.03
RBFOX1-222ENST00000585867 A0A1B0GU69 56 aa8.61□□□□□ -1.03
RBFOX1-222ENST00000585867 KRTAP10-6P60371 365 aaPredicted RBP8.59□□□□□ -1.03
RBFOX1-222ENST00000585867 LORP23490 312 aaPredicted RBP8.55□□□□□ -1.04
RBFOX1-222ENST00000585867 PSPHP1O15172 72 aa8.54□□□□□ -1.04
RBFOX1-222ENST00000585867 H0YAA0 97 aa8.5□□□□□ -1.05
RBFOX1-222ENST00000585867 Q5VV11 94 aa8.47□□□□□ -1.05
RBFOX1-222ENST00000585867 KRTAP9-8Q9BYQ0 159 aa8.44□□□□□ -1.06
RBFOX1-222ENST00000585867 ADM2Q7Z4H4 148 aa8.43□□□□□ -1.06
RBFOX1-222ENST00000585867 KRTAP3-2Q9BYR7 98 aa8.39□□□□□ -1.07
RBFOX1-222ENST00000585867 MT2AP02795 61 aa8.37□□□□□ -1.07
RBFOX1-222ENST00000585867 A0A1B0GU33 70 aa8.35□□□□□ -1.07
RBFOX1-222ENST00000585867 UQCR11O14957 56 aa8.34□□□□□ -1.07
RBFOX1-222ENST00000585867 A6NED7 52 aa8.33□□□□□ -1.08
RBFOX1-222ENST00000585867 P0C880 135 aa8.33□□□□□ -1.08
RBFOX1-222ENST00000585867 MT1FP04733 61 aa8.31□□□□□ -1.08
RBFOX1-222ENST00000585867 KRTAP10-10P60014 251 aa8.31□□□□□ -1.08
RBFOX1-222ENST00000585867 LCE2DQ5TA82 110 aaPredicted RBP8.22□□□□□ -1.09
RBFOX1-222ENST00000585867 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
RBFOX1-222ENST00000585867 M0QZ58 72 aa8.21□□□□□ -1.1
RBFOX1-222ENST00000585867 CRIPTQ9P021 101 aa8.19□□□□□ -1.1
RBFOX1-222ENST00000585867 SPATA8Q6RVD6 105 aa8.18□□□□□ -1.1
RBFOX1-222ENST00000585867 CDC42SE1Q9NRR8 79 aa8.18□□□□□ -1.1
RBFOX1-222ENST00000585867 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
RBFOX1-222ENST00000585867 BRK1Q8WUW1 75 aa8.17□□□□□ -1.1
RBFOX1-222ENST00000585867 R4GN34 69 aa8.17□□□□□ -1.1
RBFOX1-222ENST00000585867 KRTAP9-3Q9BYQ3 159 aa8.16□□□□□ -1.1
RBFOX1-222ENST00000585867 KRTAP13-4Q3LI77 160 aa8.11□□□□□ -1.11
RBFOX1-222ENST00000585867 A8MU10 97 aa8.01□□□□□ -1.13
RBFOX1-222ENST00000585867 LCE2BO14633 110 aa8.01□□□□□ -1.13
RBFOX1-222ENST00000585867 A0A0D9SG42 100 aa8□□□□□ -1.13
RBFOX1-222ENST00000585867 KRTAP19-1Q8IUB9 90 aa7.97□□□□□ -1.13
RBFOX1-222ENST00000585867 LINC01554Q52M75 96 aa7.97□□□□□ -1.13
RBFOX1-222ENST00000585867 PRO0628Q9UI54 55 aa7.97□□□□□ -1.13
RBFOX1-222ENST00000585867 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
RBFOX1-222ENST00000585867 K7ERS5 55 aa7.94□□□□□ -1.14
RBFOX1-222ENST00000585867 A6NN06 94 aa7.9□□□□□ -1.14
RBFOX1-222ENST00000585867 USH2AO75445 5202 aa7.87□□□□□ -1.15
RBFOX1-222ENST00000585867 KRTAP12-1P59990 96 aa7.84□□□□□ -1.15
RBFOX1-222ENST00000585867 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
RBFOX1-222ENST00000585867 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
RBFOX1-222ENST00000585867 FSIP2Q5CZC0 6907 aa7.82□□□□□ -1.16
RBFOX1-222ENST00000585867 CRCT1Q9UGL9 99 aa7.81□□□□□ -1.16
RBFOX1-222ENST00000585867 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
RBFOX1-222ENST00000585867 MT1BP07438 61 aa7.76□□□□□ -1.17
RBFOX1-222ENST00000585867 KRTAP9-6A0A140TA67 174 aa7.73□□□□□ -1.17
RBFOX1-222ENST00000585867 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
RBFOX1-222ENST00000585867 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
RBFOX1-222ENST00000585867 SSPOA2VEC9 5147 aa7.7□□□□□ -1.18
RBFOX1-222ENST00000585867 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
RBFOX1-222ENST00000585867 KRTAP19-6Q3LI70 58 aa7.63□□□□□ -1.19
RBFOX1-222ENST00000585867 ROMO1P60602 79 aa7.53□□□□□ -1.2
RBFOX1-222ENST00000585867 KRTAP10-5P60370 271 aa7.47□□□□□ -1.21
RBFOX1-222ENST00000585867 FCGBPQ9Y6R7 5405 aaPredicted RBP7.43□□□□□ -1.22
RBFOX1-222ENST00000585867 KTN1-AS1Q86SY8 53 aa7.41□□□□□ -1.22
RBFOX1-222ENST00000585867 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
RBFOX1-222ENST00000585867 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
RBFOX1-222ENST00000585867 MT1XP80297 61 aa7.39□□□□□ -1.23
RBFOX1-222ENST00000585867 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
RBFOX1-222ENST00000585867 TNP1P09430 55 aa7.28□□□□□ -1.24
RBFOX1-222ENST00000585867 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.25□□□□□ -1.25
RBFOX1-222ENST00000585867 SVIPQ8NHG7 77 aa7.25□□□□□ -1.25
RBFOX1-222ENST00000585867 PRAC1Q96KF2 57 aa7.18□□□□□ -1.26
RBFOX1-222ENST00000585867 MACF1Q9UPN3 7388 aaKnown RBP7.1□□□□□ -1.27
RBFOX1-222ENST00000585867 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
RBFOX1-222ENST00000585867 KRTAP10-7P60409 375 aaPredicted RBP7.08□□□□□ -1.28
RBFOX1-222ENST00000585867 PP632Q6XCG6 107 aa7.07□□□□□ -1.28
RBFOX1-222ENST00000585867 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
RBFOX1-222ENST00000585867 KRTAP9-7A8MTY7 169 aa7.01□□□□□ -1.29
RBFOX1-222ENST00000585867 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
RBFOX1-222ENST00000585867 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
RBFOX1-222ENST00000585867 SYNE2Q8WXH0 6885 aaKnown RBP6.94□□□□□ -1.3
RBFOX1-222ENST00000585867 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
RBFOX1-222ENST00000585867 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
RBFOX1-222ENST00000585867 KRTAP8-1Q8IUC2 63 aa6.89□□□□□ -1.31
RBFOX1-222ENST00000585867 KMT2DO14686 5537 aa6.86□□□□□ -1.31
RBFOX1-222ENST00000585867 KRTAP5-9P26371 169 aa6.81□□□□□ -1.32
RBFOX1-222ENST00000585867 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
RBFOX1-222ENST00000585867 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
RBFOX1-222ENST00000585867 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
RBFOX1-222ENST00000585867 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
RBFOX1-222ENST00000585867 MUC12Q9UKN1 5478 aa6.57□□□□□ -1.36
RBFOX1-222ENST00000585867 SPRR2EP22531 72 aa6.53□□□□□ -1.36
RBFOX1-222ENST00000585867 SPRR2BP35325 72 aa6.53□□□□□ -1.36
RBFOX1-222ENST00000585867 SPRR2AP35326 72 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms