RNA–Protein interactions for RNA: ENST00000585400.1

NPHS1-203, Transcript of NPHS1, nephrin, humanhuman

TSL 1 (best)

Gene NPHS1, Length 999 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-203ENST00000585400 KRTAP3-3Q9BYR6 98 aa10.42□□□□□ -0.74
NPHS1-203ENST00000585400 H3BPC8 53 aa10.41□□□□□ -0.74
NPHS1-203ENST00000585400 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
NPHS1-203ENST00000585400 KRTAP19-1Q8IUB9 90 aa10.4□□□□□ -0.74
NPHS1-203ENST00000585400 FAM236AA0A1B0GUQ0 79 aa10.39□□□□□ -0.75
NPHS1-203ENST00000585400 FAM236BA0A1B0GV22 79 aa10.39□□□□□ -0.75
NPHS1-203ENST00000585400 FCGBPQ9Y6R7 5405 aaPredicted RBP10.36□□□□□ -0.75
NPHS1-203ENST00000585400 A8MUN3 132 aa10.36□□□□□ -0.75
NPHS1-203ENST00000585400 NDUFC1O43677 76 aa10.29□□□□□ -0.76
NPHS1-203ENST00000585400 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
NPHS1-203ENST00000585400 TRAV7A0A075B6U4 112 aa10.26□□□□□ -0.77
NPHS1-203ENST00000585400 DMAC1Q96GE9 116 aa10.17□□□□□ -0.78
NPHS1-203ENST00000585400 KRTAP19-6Q3LI70 58 aa10.14□□□□□ -0.79
NPHS1-203ENST00000585400 SPRR2GQ9BYE4 73 aa10.11□□□□□ -0.79
NPHS1-203ENST00000585400 H0YAA0 97 aa10.1□□□□□ -0.79
NPHS1-203ENST00000585400 MACF1Q9UPN3 7388 aaKnown RBP10.08□□□□□ -0.8
NPHS1-203ENST00000585400 CRIPTQ9P021 101 aa10.05□□□□□ -0.8
NPHS1-203ENST00000585400 SNURFQ9Y675 71 aa10.05□□□□□ -0.8
NPHS1-203ENST00000585400 ADM2Q7Z4H4 148 aa10.04□□□□□ -0.8
NPHS1-203ENST00000585400 KRTAP19-8Q3LI54 63 aa10.01□□□□□ -0.81
NPHS1-203ENST00000585400 Q5VV11 94 aa10.01□□□□□ -0.81
NPHS1-203ENST00000585400 SERP2Q8N6R1 65 aa10.01□□□□□ -0.81
NPHS1-203ENST00000585400 MT1BP07438 61 aa9.99□□□□□ -0.81
NPHS1-203ENST00000585400 SYNE2Q8WXH0 6885 aaKnown RBP9.98□□□□□ -0.81
NPHS1-203ENST00000585400 ACYP2P14621 99 aa9.98□□□□□ -0.81
NPHS1-203ENST00000585400 C20orf197Q8N268 126 aa9.97□□□□□ -0.81
NPHS1-203ENST00000585400 P0C880 135 aa9.85□□□□□ -0.83
NPHS1-203ENST00000585400 SPANXA2-OT1Q8N9U9 137 aa9.85□□□□□ -0.83
NPHS1-203ENST00000585400 CHKB-CPT1BH3BT56 60 aa9.83□□□□□ -0.84
NPHS1-203ENST00000585400 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
NPHS1-203ENST00000585400 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
NPHS1-203ENST00000585400 A6NN06 94 aa9.79□□□□□ -0.84
NPHS1-203ENST00000585400 COX7CP15954 63 aa9.77□□□□□ -0.85
NPHS1-203ENST00000585400 R4GN34 69 aa9.76□□□□□ -0.85
NPHS1-203ENST00000585400 KRTAP6-3Q3LI67 103 aa9.71□□□□□ -0.86
NPHS1-203ENST00000585400 M0QZ58 72 aa9.7□□□□□ -0.86
NPHS1-203ENST00000585400 KRTAP10-5P60370 271 aa9.7□□□□□ -0.86
NPHS1-203ENST00000585400 COA5Q86WW8 74 aa9.59□□□□□ -0.87
NPHS1-203ENST00000585400 CYSTM1Q9H1C7 97 aa9.59□□□□□ -0.87
NPHS1-203ENST00000585400 PLAC4Q8WY50 150 aa9.58□□□□□ -0.88
NPHS1-203ENST00000585400 ANAPC13Q9BS18 74 aa9.58□□□□□ -0.88
NPHS1-203ENST00000585400 H7BZZ5 65 aa9.57□□□□□ -0.88
NPHS1-203ENST00000585400 LINC01554Q52M75 96 aa9.57□□□□□ -0.88
NPHS1-203ENST00000585400 PRO2289Q9P1D8 64 aa9.44□□□□□ -0.9
NPHS1-203ENST00000585400 MT1XP80297 61 aa9.43□□□□□ -0.9
NPHS1-203ENST00000585400 MUC12Q9UKN1 5478 aa9.41□□□□□ -0.9
NPHS1-203ENST00000585400 CCDC179H3BU77 68 aa9.39□□□□□ -0.91
NPHS1-203ENST00000585400 NEBP20929 6669 aa9.36□□□□□ -0.91
NPHS1-203ENST00000585400 SEC61GP60059 68 aa9.31□□□□□ -0.92
NPHS1-203ENST00000585400 KRTAP13-4Q3LI77 160 aa9.31□□□□□ -0.92
NPHS1-203ENST00000585400 SERP1Q9Y6X1 66 aa9.29□□□□□ -0.92
NPHS1-203ENST00000585400 KRTAP5-9P26371 169 aa9.2□□□□□ -0.94
NPHS1-203ENST00000585400 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
NPHS1-203ENST00000585400 KMT2DO14686 5537 aa9.15□□□□□ -0.94
NPHS1-203ENST00000585400 KRTAP12-2P59991 146 aa9.14□□□□□ -0.95
NPHS1-203ENST00000585400 A0A1B0GU33 70 aa9.13□□□□□ -0.95
NPHS1-203ENST00000585400 MDN1Q9NU22 5596 aa9.13□□□□□ -0.95
NPHS1-203ENST00000585400 KRTAP20-1Q3LI63 56 aa9.12□□□□□ -0.95
NPHS1-203ENST00000585400 SPATA8Q6RVD6 105 aa9.09□□□□□ -0.95
NPHS1-203ENST00000585400 A0A0D9SG42 100 aa9.08□□□□□ -0.96
NPHS1-203ENST00000585400 A0A1B0GU69 56 aa9.08□□□□□ -0.96
NPHS1-203ENST00000585400 TMEM258P61165 79 aa9.03□□□□□ -0.96
NPHS1-203ENST00000585400 CAMK2N1Q7Z7J9 78 aa9.03□□□□□ -0.96
NPHS1-203ENST00000585400 KRTAP10-7P60409 375 aaPredicted RBP9.02□□□□□ -0.97
NPHS1-203ENST00000585400 SPRR2FQ96RM1 72 aa9.01□□□□□ -0.97
NPHS1-203ENST00000585400 KRTAP8-1Q8IUC2 63 aa8.99□□□□□ -0.97
NPHS1-203ENST00000585400 KRTAP4-8A0A0G2JLE6 195 aa8.95□□□□□ -0.98
NPHS1-203ENST00000585400 KRTAP10-12P60413 245 aa8.95□□□□□ -0.98
NPHS1-203ENST00000585400 KRTAP4-8Q9BYQ9 185 aa8.95□□□□□ -0.98
NPHS1-203ENST00000585400 SPINT4Q6UDR6 99 aa8.92□□□□□ -0.98
NPHS1-203ENST00000585400 SPRR2EP22531 72 aa8.91□□□□□ -0.98
NPHS1-203ENST00000585400 SPRR2BP35325 72 aa8.91□□□□□ -0.98
NPHS1-203ENST00000585400 SPRR2AP35326 72 aa8.91□□□□□ -0.98
NPHS1-203ENST00000585400 PRR15LQ9BU68 103 aa8.88□□□□□ -0.99
NPHS1-203ENST00000585400 SMIM26A0A096LP01 95 aa8.87□□□□□ -0.99
NPHS1-203ENST00000585400 KRTAP12-1P59990 96 aa8.87□□□□□ -0.99
NPHS1-203ENST00000585400 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
NPHS1-203ENST00000585400 A8MU10 97 aa8.82□□□□□ -1
NPHS1-203ENST00000585400 KRTAP2-3P0C7H8 128 aa8.8□□□□□ -1
NPHS1-203ENST00000585400 KRTAP2-4Q9BYR9 128 aa8.8□□□□□ -1
NPHS1-203ENST00000585400 LCE1AQ5T7P2 110 aa8.7□□□□□ -1.02
NPHS1-203ENST00000585400 SPRR2DP22532 72 aa8.62□□□□□ -1.03
NPHS1-203ENST00000585400 UQCR11O14957 56 aa8.59□□□□□ -1.03
NPHS1-203ENST00000585400 KRTAP2-2Q9BYT5 123 aa8.52□□□□□ -1.05
NPHS1-203ENST00000585400 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
NPHS1-203ENST00000585400 V9GYY9 64 aa8.49□□□□□ -1.05
NPHS1-203ENST00000585400 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.06
NPHS1-203ENST00000585400 PSPHP1O15172 72 aa8.44□□□□□ -1.06
NPHS1-203ENST00000585400 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
NPHS1-203ENST00000585400 Q1T7F1 81 aa8.44□□□□□ -1.06
NPHS1-203ENST00000585400 KRTAP19-7Q3SYF9 63 aa8.42□□□□□ -1.06
NPHS1-203ENST00000585400 PCP4P48539 62 aa8.4□□□□□ -1.06
NPHS1-203ENST00000585400 TNP1P09430 55 aa8.38□□□□□ -1.07
NPHS1-203ENST00000585400 LCE3BQ5TA77 95 aa8.37□□□□□ -1.07
NPHS1-203ENST00000585400 MT1EP04732 61 aa8.35□□□□□ -1.07
NPHS1-203ENST00000585400 KRTAP19-5Q3LI72 72 aa8.3□□□□□ -1.08
NPHS1-203ENST00000585400 LCE3AQ5TA76 89 aa8.26□□□□□ -1.09
NPHS1-203ENST00000585400 K7ERS5 55 aa8.22□□□□□ -1.09
NPHS1-203ENST00000585400 RPS28P62857 69 aaKnown RBP8.22□□□□□ -1.09
NPHS1-203ENST00000585400 KRTAP19-3Q7Z4W3 81 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms