RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
VAPA-209ENST00000585042 C4orf26Q17RF5 130 aa6.91□□□□□ -1.3
VAPA-209ENST00000585042 KRTAP9-9Q9BYP9 154 aa6.91□□□□□ -1.3
VAPA-209ENST00000585042 KRTAP9-4Q9BYQ2 154 aa6.91□□□□□ -1.3
VAPA-209ENST00000585042 TRAV22A0A0B4J277 110 aa6.89□□□□□ -1.31
VAPA-209ENST00000585042 UQCRQO14949 82 aa6.88□□□□□ -1.31
VAPA-209ENST00000585042 SCGB1A1P11684 91 aa6.87□□□□□ -1.31
VAPA-209ENST00000585042 LOC101927531A0A1B0GV80 90 aa6.86□□□□□ -1.31
VAPA-209ENST00000585042 ATOX1O00244 68 aa6.85□□□□□ -1.31
VAPA-209ENST00000585042 A0A087WVE0 104 aa6.84□□□□□ -1.31
VAPA-209ENST00000585042 C1orf64Q8NEQ6 169 aa6.83□□□□□ -1.32
VAPA-209ENST00000585042 CYP4F30PQ9H0H9 118 aa6.83□□□□□ -1.32
VAPA-209ENST00000585042 A6NN06 94 aa6.82□□□□□ -1.32
VAPA-209ENST00000585042 H0Y9P7 68 aa6.81□□□□□ -1.32
VAPA-209ENST00000585042 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
VAPA-209ENST00000585042 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
VAPA-209ENST00000585042 C5orf47Q569G3 176 aa6.8□□□□□ -1.32
VAPA-209ENST00000585042 Q5VV11 94 aa6.79□□□□□ -1.32
VAPA-209ENST00000585042 MT1BP07438 61 aa6.78□□□□□ -1.32
VAPA-209ENST00000585042 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
VAPA-209ENST00000585042 CSAG1Q6PB30 78 aa6.78□□□□□ -1.32
VAPA-209ENST00000585042 SMIM20Q8N5G0 67 aa6.78□□□□□ -1.32
VAPA-209ENST00000585042 SPRR2GQ9BYE4 73 aa6.78□□□□□ -1.32
VAPA-209ENST00000585042 MP68P56378 58 aa6.77□□□□□ -1.33
VAPA-209ENST00000585042 S4R3F8 94 aa6.76□□□□□ -1.33
VAPA-209ENST00000585042 NEBP20929 6669 aa6.73□□□□□ -1.33
VAPA-209ENST00000585042 OCR1Q9BZK8 76 aa6.73□□□□□ -1.33
VAPA-209ENST00000585042 LINC00208Q96KT6 92 aa6.72□□□□□ -1.33
VAPA-209ENST00000585042 KRTAP10-5P60370 271 aa6.71□□□□□ -1.34
VAPA-209ENST00000585042 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
VAPA-209ENST00000585042 KRTAP4-8A0A0G2JLE6 195 aa6.7□□□□□ -1.34
VAPA-209ENST00000585042 LCA10Q71F78 164 aa6.7□□□□□ -1.34
VAPA-209ENST00000585042 LCE1DQ5T752 114 aa6.69□□□□□ -1.34
VAPA-209ENST00000585042 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
VAPA-209ENST00000585042 SERP2Q8N6R1 65 aa6.68□□□□□ -1.34
VAPA-209ENST00000585042 ANAPC13Q9BS18 74 aa6.68□□□□□ -1.34
VAPA-209ENST00000585042 H3BPC8 53 aa6.67□□□□□ -1.34
VAPA-209ENST00000585042 KRTAP5-9P26371 169 aa6.65□□□□□ -1.34
VAPA-209ENST00000585042 A8MUN3 132 aa6.64□□□□□ -1.35
VAPA-209ENST00000585042 COX7CP15954 63 aa6.63□□□□□ -1.35
VAPA-209ENST00000585042 KRTAP20-1Q3LI63 56 aa6.62□□□□□ -1.35
VAPA-209ENST00000585042 CRIPTQ9P021 101 aa6.62□□□□□ -1.35
VAPA-209ENST00000585042 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
VAPA-209ENST00000585042 NDUFC1O43677 76 aa6.58□□□□□ -1.36
VAPA-209ENST00000585042 PCP4P48539 62 aa6.57□□□□□ -1.36
VAPA-209ENST00000585042 LCE5AQ5TCM9 118 aa6.54□□□□□ -1.36
VAPA-209ENST00000585042 C20orf197Q8N268 126 aa6.52□□□□□ -1.37
VAPA-209ENST00000585042 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
VAPA-209ENST00000585042 CCDC179H3BU77 68 aa6.49□□□□□ -1.37
VAPA-209ENST00000585042 KMT2DO14686 5537 aa6.48□□□□□ -1.37
VAPA-209ENST00000585042 H0YAA0 97 aa6.47□□□□□ -1.37
VAPA-209ENST00000585042 DMAC1Q96GE9 116 aa6.46□□□□□ -1.38
VAPA-209ENST00000585042 SNURFQ9Y675 71 aa6.46□□□□□ -1.38
VAPA-209ENST00000585042 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
VAPA-209ENST00000585042 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
VAPA-209ENST00000585042 KRTAP2-3P0C7H8 128 aa6.43□□□□□ -1.38
VAPA-209ENST00000585042 KRTAP2-4Q9BYR9 128 aa6.43□□□□□ -1.38
VAPA-209ENST00000585042 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
VAPA-209ENST00000585042 ACYP2P14621 99 aa6.4□□□□□ -1.38
VAPA-209ENST00000585042 PRO2289Q9P1D8 64 aa6.4□□□□□ -1.38
VAPA-209ENST00000585042 H7BZZ5 65 aa6.38□□□□□ -1.39
VAPA-209ENST00000585042 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
VAPA-209ENST00000585042 SPANXA2-OT1Q8N9U9 137 aa6.36□□□□□ -1.39
VAPA-209ENST00000585042 SPTSSBQ8NFR3 76 aa6.34□□□□□ -1.39
VAPA-209ENST00000585042 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.39
VAPA-209ENST00000585042 CYSTM1Q9H1C7 97 aa6.34□□□□□ -1.39
VAPA-209ENST00000585042 TMEM258P61165 79 aa6.33□□□□□ -1.4
VAPA-209ENST00000585042 SPRR2EP22531 72 aa6.31□□□□□ -1.4
VAPA-209ENST00000585042 SPRR2BP35325 72 aa6.31□□□□□ -1.4
VAPA-209ENST00000585042 SPRR2AP35326 72 aa6.31□□□□□ -1.4
VAPA-209ENST00000585042 ATP5EP56381 51 aaPredicted RBP6.31□□□□□ -1.4
VAPA-209ENST00000585042 CHKB-CPT1BH3BT56 60 aa6.3□□□□□ -1.4
VAPA-209ENST00000585042 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
VAPA-209ENST00000585042 MT1XP80297 61 aa6.29□□□□□ -1.4
VAPA-209ENST00000585042 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
VAPA-209ENST00000585042 KRTAP4-11Q9BYQ6 195 aa6.26□□□□□ -1.41
VAPA-209ENST00000585042 KRTAP8-1Q8IUC2 63 aa6.25□□□□□ -1.41
VAPA-209ENST00000585042 R4GN34 69 aa6.23□□□□□ -1.41
VAPA-209ENST00000585042 LCE1AQ5T7P2 110 aa6.21□□□□□ -1.42
VAPA-209ENST00000585042 KRTAP2-2Q9BYT5 123 aa6.21□□□□□ -1.42
VAPA-209ENST00000585042 KRTAP2-1Q9BYU5 128 aa6.21□□□□□ -1.42
VAPA-209ENST00000585042 A0A0A0MQY5 61 aa6.2□□□□□ -1.42
VAPA-209ENST00000585042 P0C880 135 aa6.19□□□□□ -1.42
VAPA-209ENST00000585042 M0QZ58 72 aa6.17□□□□□ -1.42
VAPA-209ENST00000585042 KRTAP4-2Q9BYR5 136 aa6.14□□□□□ -1.43
VAPA-209ENST00000585042 SERP1Q9Y6X1 66 aa6.14□□□□□ -1.43
VAPA-209ENST00000585042 RPS28P62857 69 aaKnown RBP6.13□□□□□ -1.43
VAPA-209ENST00000585042 SPRR2DP22532 72 aa6.1□□□□□ -1.43
VAPA-209ENST00000585042 COA5Q86WW8 74 aa6.1□□□□□ -1.43
VAPA-209ENST00000585042 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
VAPA-209ENST00000585042 SEC61GP60059 68 aa6.02□□□□□ -1.45
VAPA-209ENST00000585042 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
VAPA-209ENST00000585042 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
VAPA-209ENST00000585042 KRTAP10-7P60409 375 aaPredicted RBP5.98□□□□□ -1.45
VAPA-209ENST00000585042 V9GYY9 64 aa5.92□□□□□ -1.46
VAPA-209ENST00000585042 Q1T7F1 81 aa5.88□□□□□ -1.47
VAPA-209ENST00000585042 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
VAPA-209ENST00000585042 A0A1B0GU33 70 aa5.83□□□□□ -1.48
VAPA-209ENST00000585042 KRTAP13-4Q3LI77 160 aa5.82□□□□□ -1.48
VAPA-209ENST00000585042 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms