RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ATOX1O00244 68 aa7.52□□□□□ -1.21
SKA2-209ENST00000583976 C1orf64Q8NEQ6 169 aa7.49□□□□□ -1.21
SKA2-209ENST00000583976 LINC00208Q96KT6 92 aa7.49□□□□□ -1.21
SKA2-209ENST00000583976 MP68P56378 58 aa7.48□□□□□ -1.21
SKA2-209ENST00000583976 FAM236AA0A1B0GUQ0 79 aa7.47□□□□□ -1.21
SKA2-209ENST00000583976 FAM236BA0A1B0GV22 79 aa7.47□□□□□ -1.21
SKA2-209ENST00000583976 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
SKA2-209ENST00000583976 C5orf47Q569G3 176 aa7.45□□□□□ -1.22
SKA2-209ENST00000583976 KLKP1Q107X0 134 aa7.4□□□□□ -1.22
SKA2-209ENST00000583976 KRTAP4-8Q9BYQ9 185 aa7.39□□□□□ -1.23
SKA2-209ENST00000583976 H3BPC8 53 aa7.37□□□□□ -1.23
SKA2-209ENST00000583976 TRAV7A0A075B6U4 112 aa7.36□□□□□ -1.23
SKA2-209ENST00000583976 SMIM20Q8N5G0 67 aa7.36□□□□□ -1.23
SKA2-209ENST00000583976 S4R3F8 94 aa7.35□□□□□ -1.23
SKA2-209ENST00000583976 KRTAP6-3Q3LI67 103 aa7.33□□□□□ -1.24
SKA2-209ENST00000583976 LCA10Q71F78 164 aa7.31□□□□□ -1.24
SKA2-209ENST00000583976 NEBP20929 6669 aa7.29□□□□□ -1.24
SKA2-209ENST00000583976 A8MUN3 132 aa7.24□□□□□ -1.25
SKA2-209ENST00000583976 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
SKA2-209ENST00000583976 SERP2Q8N6R1 65 aa7.23□□□□□ -1.25
SKA2-209ENST00000583976 SNURFQ9Y675 71 aa7.23□□□□□ -1.25
SKA2-209ENST00000583976 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
SKA2-209ENST00000583976 C20orf197Q8N268 126 aa7.19□□□□□ -1.26
SKA2-209ENST00000583976 NDUFC1O43677 76 aa7.16□□□□□ -1.26
SKA2-209ENST00000583976 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
SKA2-209ENST00000583976 MT1BP07438 61 aa7.11□□□□□ -1.27
SKA2-209ENST00000583976 COX7CP15954 63 aa7.1□□□□□ -1.27
SKA2-209ENST00000583976 A6NN06 94 aa7.09□□□□□ -1.27
SKA2-209ENST00000583976 ACYP2P14621 99 aa7.07□□□□□ -1.28
SKA2-209ENST00000583976 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
SKA2-209ENST00000583976 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
SKA2-209ENST00000583976 Q5VV11 94 aa7.02□□□□□ -1.29
SKA2-209ENST00000583976 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
SKA2-209ENST00000583976 KRTAP19-8Q3LI54 63 aa7□□□□□ -1.29
SKA2-209ENST00000583976 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
SKA2-209ENST00000583976 SPRR2GQ9BYE4 73 aa6.98□□□□□ -1.29
SKA2-209ENST00000583976 H0YAA0 97 aa6.97□□□□□ -1.29
SKA2-209ENST00000583976 KRTAP10-5P60370 271 aa6.97□□□□□ -1.29
SKA2-209ENST00000583976 KRTAP20-1Q3LI63 56 aa6.97□□□□□ -1.29
SKA2-209ENST00000583976 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
SKA2-209ENST00000583976 KMT2DO14686 5537 aa6.96□□□□□ -1.29
SKA2-209ENST00000583976 MDN1Q9NU22 5596 aa6.96□□□□□ -1.29
SKA2-209ENST00000583976 CHKB-CPT1BH3BT56 60 aa6.96□□□□□ -1.3
SKA2-209ENST00000583976 H7BZZ5 65 aa6.92□□□□□ -1.3
SKA2-209ENST00000583976 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
SKA2-209ENST00000583976 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
SKA2-209ENST00000583976 SPTSSBQ8NFR3 76 aa6.9□□□□□ -1.3
SKA2-209ENST00000583976 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
SKA2-209ENST00000583976 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
SKA2-209ENST00000583976 KRTAP9-9Q9BYP9 154 aa6.87□□□□□ -1.31
SKA2-209ENST00000583976 KRTAP9-4Q9BYQ2 154 aa6.87□□□□□ -1.31
SKA2-209ENST00000583976 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
SKA2-209ENST00000583976 P0C880 135 aa6.85□□□□□ -1.31
SKA2-209ENST00000583976 COA5Q86WW8 74 aa6.85□□□□□ -1.31
SKA2-209ENST00000583976 R4GN34 69 aa6.76□□□□□ -1.33
SKA2-209ENST00000583976 M0QZ58 72 aa6.73□□□□□ -1.33
SKA2-209ENST00000583976 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
SKA2-209ENST00000583976 SPRR2FQ96RM1 72 aa6.66□□□□□ -1.34
SKA2-209ENST00000583976 ATP5EP56381 51 aaPredicted RBP6.65□□□□□ -1.34
SKA2-209ENST00000583976 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
SKA2-209ENST00000583976 KRTAP2-3P0C7H8 128 aa6.64□□□□□ -1.35
SKA2-209ENST00000583976 KRTAP2-4Q9BYR9 128 aa6.64□□□□□ -1.35
SKA2-209ENST00000583976 SPRR2EP22531 72 aa6.63□□□□□ -1.35
SKA2-209ENST00000583976 SPRR2BP35325 72 aa6.63□□□□□ -1.35
SKA2-209ENST00000583976 SPRR2AP35326 72 aa6.63□□□□□ -1.35
SKA2-209ENST00000583976 SEC61GP60059 68 aa6.61□□□□□ -1.35
SKA2-209ENST00000583976 TMEM258P61165 79 aa6.61□□□□□ -1.35
SKA2-209ENST00000583976 MT1XP80297 61 aa6.6□□□□□ -1.35
SKA2-209ENST00000583976 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
SKA2-209ENST00000583976 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
SKA2-209ENST00000583976 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
SKA2-209ENST00000583976 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
SKA2-209ENST00000583976 KRTAP8-1Q8IUC2 63 aa6.52□□□□□ -1.37
SKA2-209ENST00000583976 LCE1AQ5T7P2 110 aa6.51□□□□□ -1.37
SKA2-209ENST00000583976 PRO2289Q9P1D8 64 aa6.5□□□□□ -1.37
SKA2-209ENST00000583976 A0A1B0GU69 56 aa6.49□□□□□ -1.37
SKA2-209ENST00000583976 A0A1B0GU33 70 aa6.47□□□□□ -1.37
SKA2-209ENST00000583976 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
SKA2-209ENST00000583976 PCP4P48539 62 aa6.42□□□□□ -1.38
SKA2-209ENST00000583976 KRTAP12-2P59991 146 aa6.42□□□□□ -1.38
SKA2-209ENST00000583976 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
SKA2-209ENST00000583976 KRTAP2-2Q9BYT5 123 aa6.42□□□□□ -1.38
SKA2-209ENST00000583976 KRTAP2-1Q9BYU5 128 aa6.42□□□□□ -1.38
SKA2-209ENST00000583976 SPRR2DP22532 72 aa6.41□□□□□ -1.38
SKA2-209ENST00000583976 A0A0D9SG42 100 aa6.4□□□□□ -1.38
SKA2-209ENST00000583976 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
SKA2-209ENST00000583976 LINC01558Q9Y6Z2 57 aa6.38□□□□□ -1.39
SKA2-209ENST00000583976 PRR15LQ9BU68 103 aa6.37□□□□□ -1.39
SKA2-209ENST00000583976 H3BS24 57 aa6.31□□□□□ -1.4
SKA2-209ENST00000583976 KRTAP10-7P60409 375 aaPredicted RBP6.31□□□□□ -1.4
SKA2-209ENST00000583976 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
SKA2-209ENST00000583976 CAMK2N1Q7Z7J9 78 aa6.28□□□□□ -1.4
SKA2-209ENST00000583976 SMIM26A0A096LP01 95 aa6.27□□□□□ -1.41
SKA2-209ENST00000583976 A8MU10 97 aa6.26□□□□□ -1.41
SKA2-209ENST00000583976 KRTAP12-1P59990 96 aa6.23□□□□□ -1.41
SKA2-209ENST00000583976 KRTAP10-12P60413 245 aa6.21□□□□□ -1.42
SKA2-209ENST00000583976 V9GYY9 64 aa6.18□□□□□ -1.42
SKA2-209ENST00000583976 UQCR11O14957 56 aa6.17□□□□□ -1.42
SKA2-209ENST00000583976 PSPHP1O15172 72 aa6.17□□□□□ -1.42
SKA2-209ENST00000583976 Q1T7F1 81 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms