RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
CDRT1-207ENST00000583965 ACYP2P14621 99 aa5.78□□□□□ -1.48
CDRT1-207ENST00000583965 MT1HP80294 61 aa5.78□□□□□ -1.48
CDRT1-207ENST00000583965 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
CDRT1-207ENST00000583965 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
CDRT1-207ENST00000583965 COA5Q86WW8 74 aa5.75□□□□□ -1.49
CDRT1-207ENST00000583965 M0R2T5 61 aa5.72□□□□□ -1.49
CDRT1-207ENST00000583965 S4R3F8 94 aa5.69□□□□□ -1.5
CDRT1-207ENST00000583965 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
CDRT1-207ENST00000583965 LCE2BO14633 110 aa5.68□□□□□ -1.5
CDRT1-207ENST00000583965 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
CDRT1-207ENST00000583965 LCA10Q71F78 164 aa5.64□□□□□ -1.51
CDRT1-207ENST00000583965 KRTAP10-6P60371 365 aaPredicted RBP5.63□□□□□ -1.51
CDRT1-207ENST00000583965 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
CDRT1-207ENST00000583965 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
CDRT1-207ENST00000583965 Q1T7F1 81 aa5.59□□□□□ -1.51
CDRT1-207ENST00000583965 SPTSSBQ8NFR3 76 aa5.59□□□□□ -1.51
CDRT1-207ENST00000583965 V9GYY9 64 aa5.58□□□□□ -1.52
CDRT1-207ENST00000583965 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
CDRT1-207ENST00000583965 KRTAP9-8Q9BYQ0 159 aa5.53□□□□□ -1.52
CDRT1-207ENST00000583965 MT2AP02795 61 aa5.49□□□□□ -1.53
CDRT1-207ENST00000583965 H0YAA0 97 aa5.47□□□□□ -1.53
CDRT1-207ENST00000583965 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
CDRT1-207ENST00000583965 KRTAP10-10P60014 251 aa5.45□□□□□ -1.54
CDRT1-207ENST00000583965 MT1FP04733 61 aa5.44□□□□□ -1.54
CDRT1-207ENST00000583965 PRR15LQ9BU68 103 aa5.44□□□□□ -1.54
CDRT1-207ENST00000583965 A0A1B0GU69 56 aa5.42□□□□□ -1.54
CDRT1-207ENST00000583965 PSPHP1O15172 72 aa5.41□□□□□ -1.54
CDRT1-207ENST00000583965 Q5VV11 94 aa5.41□□□□□ -1.54
CDRT1-207ENST00000583965 SEC61GP60059 68 aa5.4□□□□□ -1.54
CDRT1-207ENST00000583965 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
CDRT1-207ENST00000583965 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
CDRT1-207ENST00000583965 CRIPTQ9P021 101 aa5.34□□□□□ -1.55
CDRT1-207ENST00000583965 KRTAP9-2Q9BYQ4 174 aa5.32□□□□□ -1.56
CDRT1-207ENST00000583965 P0C880 135 aa5.3□□□□□ -1.56
CDRT1-207ENST00000583965 KRTAP9-6A0A140TA67 174 aa5.28□□□□□ -1.56
CDRT1-207ENST00000583965 A0A1B0GU33 70 aa5.27□□□□□ -1.57
CDRT1-207ENST00000583965 UQCR11O14957 56 aa5.27□□□□□ -1.57
CDRT1-207ENST00000583965 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
CDRT1-207ENST00000583965 A6NED7 52 aa5.26□□□□□ -1.57
CDRT1-207ENST00000583965 KRTAP19-1Q8IUB9 90 aa5.25□□□□□ -1.57
CDRT1-207ENST00000583965 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
CDRT1-207ENST00000583965 R4GN34 69 aa5.23□□□□□ -1.57
CDRT1-207ENST00000583965 CDC42SE1Q9NRR8 79 aa5.22□□□□□ -1.57
CDRT1-207ENST00000583965 M0QZ58 72 aa5.2□□□□□ -1.58
CDRT1-207ENST00000583965 MIR22HGQ0VDD5 57 aa5.2□□□□□ -1.58
CDRT1-207ENST00000583965 BRK1Q8WUW1 75 aa5.18□□□□□ -1.58
CDRT1-207ENST00000583965 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
CDRT1-207ENST00000583965 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
CDRT1-207ENST00000583965 USH2AO75445 5202 aa5.14□□□□□ -1.59
CDRT1-207ENST00000583965 A8MU10 97 aa5.11□□□□□ -1.59
CDRT1-207ENST00000583965 PRO0628Q9UI54 55 aa5.11□□□□□ -1.59
CDRT1-207ENST00000583965 MT1BP07438 61 aa5.1□□□□□ -1.59
CDRT1-207ENST00000583965 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
CDRT1-207ENST00000583965 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
CDRT1-207ENST00000583965 CRCT1Q9UGL9 99 aa5.07□□□□□ -1.6
CDRT1-207ENST00000583965 A6NN06 94 aa5.05□□□□□ -1.6
CDRT1-207ENST00000583965 PLAC4Q8WY50 150 aa5.04□□□□□ -1.6
CDRT1-207ENST00000583965 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
CDRT1-207ENST00000583965 A0A0D9SG42 100 aa5.01□□□□□ -1.61
CDRT1-207ENST00000583965 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
CDRT1-207ENST00000583965 K7ERS5 55 aa4.98□□□□□ -1.61
CDRT1-207ENST00000583965 KRTAP12-1P59990 96 aa4.98□□□□□ -1.61
CDRT1-207ENST00000583965 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
CDRT1-207ENST00000583965 KRTAP10-5P60370 271 aa4.92□□□□□ -1.62
CDRT1-207ENST00000583965 PRO2289Q9P1D8 64 aa4.91□□□□□ -1.62
CDRT1-207ENST00000583965 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
CDRT1-207ENST00000583965 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
CDRT1-207ENST00000583965 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
CDRT1-207ENST00000583965 MT1XP80297 61 aa4.87□□□□□ -1.63
CDRT1-207ENST00000583965 CAMK2N1Q7Z7J9 78 aa4.86□□□□□ -1.63
CDRT1-207ENST00000583965 ROMO1P60602 79 aa4.78□□□□□ -1.64
CDRT1-207ENST00000583965 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
CDRT1-207ENST00000583965 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
CDRT1-207ENST00000583965 KRTAP9-7A8MTY7 169 aa4.7□□□□□ -1.66
CDRT1-207ENST00000583965 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.69□□□□□ -1.66
CDRT1-207ENST00000583965 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
CDRT1-207ENST00000583965 KRTAP10-12P60413 245 aa4.64□□□□□ -1.67
CDRT1-207ENST00000583965 MACF1Q9UPN3 7388 aaKnown RBP4.64□□□□□ -1.67
CDRT1-207ENST00000583965 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
CDRT1-207ENST00000583965 TNP1P09430 55 aa4.59□□□□□ -1.67
CDRT1-207ENST00000583965 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
CDRT1-207ENST00000583965 KMT2DO14686 5537 aa4.52□□□□□ -1.69
CDRT1-207ENST00000583965 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
CDRT1-207ENST00000583965 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
CDRT1-207ENST00000583965 KRTAP6-3Q3LI67 103 aa4.52□□□□□ -1.69
CDRT1-207ENST00000583965 KRTAP8-1Q8IUC2 63 aa4.52□□□□□ -1.69
CDRT1-207ENST00000583965 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
CDRT1-207ENST00000583965 H3BS24 57 aa4.5□□□□□ -1.69
CDRT1-207ENST00000583965 SYNE2Q8WXH0 6885 aaKnown RBP4.48□□□□□ -1.69
CDRT1-207ENST00000583965 KRTAP5-9P26371 169 aa4.47□□□□□ -1.69
CDRT1-207ENST00000583965 PP632Q6XCG6 107 aa4.47□□□□□ -1.69
CDRT1-207ENST00000583965 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
CDRT1-207ENST00000583965 KRTAP4-6Q9BYQ5 205 aa4.44□□□□□ -1.7
CDRT1-207ENST00000583965 LCE3AQ5TA76 89 aa4.41□□□□□ -1.7
CDRT1-207ENST00000583965 SPRR2FQ96RM1 72 aa4.41□□□□□ -1.7
CDRT1-207ENST00000583965 KRTAP19-7Q3SYF9 63 aa4.34□□□□□ -1.71
CDRT1-207ENST00000583965 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
CDRT1-207ENST00000583965 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
CDRT1-207ENST00000583965 MT1EP04732 61 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms