RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 MP68P56378 58 aa11.7□□□□□ -0.54
TSEN54-209ENST00000583454 C5orf47Q569G3 176 aa11.7□□□□□ -0.54
TSEN54-209ENST00000583454 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
TSEN54-209ENST00000583454 LCA10Q71F78 164 aa11.66□□□□□ -0.54
TSEN54-209ENST00000583454 KLKP1Q107X0 134 aa11.62□□□□□ -0.55
TSEN54-209ENST00000583454 CSAG1Q6PB30 78 aa11.61□□□□□ -0.55
TSEN54-209ENST00000583454 H3BPC8 53 aa11.6□□□□□ -0.55
TSEN54-209ENST00000583454 KRTAP3-3Q9BYR6 98 aa11.57□□□□□ -0.56
TSEN54-209ENST00000583454 A8MUN3 132 aa11.52□□□□□ -0.57
TSEN54-209ENST00000583454 FAM236AA0A1B0GUQ0 79 aa11.5□□□□□ -0.57
TSEN54-209ENST00000583454 FAM236BA0A1B0GV22 79 aa11.5□□□□□ -0.57
TSEN54-209ENST00000583454 SMIM20Q8N5G0 67 aa11.48□□□□□ -0.57
TSEN54-209ENST00000583454 TRAV7A0A075B6U4 112 aa11.46□□□□□ -0.57
TSEN54-209ENST00000583454 NDUFC1O43677 76 aa11.37□□□□□ -0.59
TSEN54-209ENST00000583454 KRTAP6-3Q3LI67 103 aa11.33□□□□□ -0.6
TSEN54-209ENST00000583454 DMAC1Q96GE9 116 aa11.31□□□□□ -0.6
TSEN54-209ENST00000583454 H0YAA0 97 aa11.22□□□□□ -0.61
TSEN54-209ENST00000583454 SPRR2GQ9BYE4 73 aa11.2□□□□□ -0.62
TSEN54-209ENST00000583454 SERP2Q8N6R1 65 aa11.19□□□□□ -0.62
TSEN54-209ENST00000583454 SNURFQ9Y675 71 aa11.15□□□□□ -0.62
TSEN54-209ENST00000583454 CRIPTQ9P021 101 aa11.13□□□□□ -0.63
TSEN54-209ENST00000583454 MT1BP07438 61 aa11.1□□□□□ -0.63
TSEN54-209ENST00000583454 NEBP20929 6669 aa11.09□□□□□ -0.63
TSEN54-209ENST00000583454 ACYP2P14621 99 aa11.09□□□□□ -0.63
TSEN54-209ENST00000583454 C20orf197Q8N268 126 aa11.09□□□□□ -0.63
TSEN54-209ENST00000583454 KRTAP19-8Q3LI54 63 aa11.08□□□□□ -0.64
TSEN54-209ENST00000583454 ADM2Q7Z4H4 148 aa11.07□□□□□ -0.64
TSEN54-209ENST00000583454 MUC12Q9UKN1 5478 aa11.04□□□□□ -0.64
TSEN54-209ENST00000583454 SPANXA2-OT1Q8N9U9 137 aa11.01□□□□□ -0.65
TSEN54-209ENST00000583454 Q5VV11 94 aa11□□□□□ -0.65
TSEN54-209ENST00000583454 A6NN06 94 aa10.98□□□□□ -0.65
TSEN54-209ENST00000583454 COX7CP15954 63 aa10.93□□□□□ -0.66
TSEN54-209ENST00000583454 KRTAP3-2Q9BYR7 98 aa10.89□□□□□ -0.67
TSEN54-209ENST00000583454 P0C880 135 aa10.88□□□□□ -0.67
TSEN54-209ENST00000583454 KRTAP10-5P60370 271 aa10.88□□□□□ -0.67
TSEN54-209ENST00000583454 SPTSSBQ8NFR3 76 aa10.87□□□□□ -0.67
TSEN54-209ENST00000583454 CHKB-CPT1BH3BT56 60 aa10.84□□□□□ -0.67
TSEN54-209ENST00000583454 KMT2DO14686 5537 aa10.75□□□□□ -0.69
TSEN54-209ENST00000583454 R4GN34 69 aa10.75□□□□□ -0.69
TSEN54-209ENST00000583454 MDN1Q9NU22 5596 aa10.74□□□□□ -0.69
TSEN54-209ENST00000583454 KRTAP5-9P26371 169 aa10.73□□□□□ -0.69
TSEN54-209ENST00000583454 CYSTM1Q9H1C7 97 aa10.72□□□□□ -0.69
TSEN54-209ENST00000583454 H7BZZ5 65 aa10.7□□□□□ -0.7
TSEN54-209ENST00000583454 ANAPC13Q9BS18 74 aa10.69□□□□□ -0.7
TSEN54-209ENST00000583454 M0QZ58 72 aa10.68□□□□□ -0.7
TSEN54-209ENST00000583454 COA5Q86WW8 74 aa10.65□□□□□ -0.7
TSEN54-209ENST00000583454 KRTAP20-1Q3LI63 56 aa10.62□□□□□ -0.71
TSEN54-209ENST00000583454 PLAC4Q8WY50 150 aa10.54□□□□□ -0.72
TSEN54-209ENST00000583454 CCDC179H3BU77 68 aa10.49□□□□□ -0.73
TSEN54-209ENST00000583454 LINC01554Q52M75 96 aa10.48□□□□□ -0.73
TSEN54-209ENST00000583454 MT1XP80297 61 aa10.42□□□□□ -0.74
TSEN54-209ENST00000583454 PRO2289Q9P1D8 64 aa10.39□□□□□ -0.75
TSEN54-209ENST00000583454 KRTAP13-4Q3LI77 160 aa10.31□□□□□ -0.76
TSEN54-209ENST00000583454 SEC61GP60059 68 aa10.3□□□□□ -0.76
TSEN54-209ENST00000583454 SERP1Q9Y6X1 66 aa10.28□□□□□ -0.76
TSEN54-209ENST00000583454 KRTAP2-3P0C7H8 128 aa10.26□□□□□ -0.77
TSEN54-209ENST00000583454 ATP5EP56381 51 aaPredicted RBP10.26□□□□□ -0.77
TSEN54-209ENST00000583454 SPRR2FQ96RM1 72 aa10.26□□□□□ -0.77
TSEN54-209ENST00000583454 KRTAP2-4Q9BYR9 128 aa10.26□□□□□ -0.77
TSEN54-209ENST00000583454 SPRR2EP22531 72 aa10.18□□□□□ -0.78
TSEN54-209ENST00000583454 SPRR2BP35325 72 aa10.18□□□□□ -0.78
TSEN54-209ENST00000583454 SPRR2AP35326 72 aa10.18□□□□□ -0.78
TSEN54-209ENST00000583454 A0A1B0GU33 70 aa10.13□□□□□ -0.79
TSEN54-209ENST00000583454 KRTAP12-2P59991 146 aa10.11□□□□□ -0.79
TSEN54-209ENST00000583454 TMEM258P61165 79 aa10.11□□□□□ -0.79
TSEN54-209ENST00000583454 KRTAP8-1Q8IUC2 63 aa10.1□□□□□ -0.79
TSEN54-209ENST00000583454 A0A1B0GU69 56 aa10.07□□□□□ -0.8
TSEN54-209ENST00000583454 LCE1AQ5T7P2 110 aa10.07□□□□□ -0.8
TSEN54-209ENST00000583454 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
TSEN54-209ENST00000583454 A0A0D9SG42 100 aa9.99□□□□□ -0.81
TSEN54-209ENST00000583454 KRTAP4-8A0A0G2JLE6 195 aa9.98□□□□□ -0.81
TSEN54-209ENST00000583454 KRTAP4-8Q9BYQ9 185 aa9.98□□□□□ -0.81
TSEN54-209ENST00000583454 PCP4P48539 62 aa9.95□□□□□ -0.82
TSEN54-209ENST00000583454 KRTAP10-7P60409 375 aaPredicted RBP9.93□□□□□ -0.82
TSEN54-209ENST00000583454 CAMK2N1Q7Z7J9 78 aa9.92□□□□□ -0.82
TSEN54-209ENST00000583454 KRTAP10-12P60413 245 aa9.91□□□□□ -0.82
TSEN54-209ENST00000583454 KRTAP2-2Q9BYT5 123 aa9.91□□□□□ -0.82
TSEN54-209ENST00000583454 KRTAP2-1Q9BYU5 128 aa9.91□□□□□ -0.82
TSEN54-209ENST00000583454 LINC01558Q9Y6Z2 57 aa9.9□□□□□ -0.82
TSEN54-209ENST00000583454 PRR15LQ9BU68 103 aa9.88□□□□□ -0.83
TSEN54-209ENST00000583454 SMIM26A0A096LP01 95 aa9.84□□□□□ -0.83
TSEN54-209ENST00000583454 SPRR2DP22532 72 aa9.84□□□□□ -0.83
TSEN54-209ENST00000583454 KRTAP12-1P59990 96 aa9.84□□□□□ -0.83
TSEN54-209ENST00000583454 SPINT4Q6UDR6 99 aa9.82□□□□□ -0.84
TSEN54-209ENST00000583454 A8MU10 97 aa9.75□□□□□ -0.85
TSEN54-209ENST00000583454 LCE3BQ5TA77 95 aa9.62□□□□□ -0.87
TSEN54-209ENST00000583454 UQCR11O14957 56 aa9.57□□□□□ -0.88
TSEN54-209ENST00000583454 V9GYY9 64 aa9.51□□□□□ -0.89
TSEN54-209ENST00000583454 Q1T7F1 81 aa9.49□□□□□ -0.89
TSEN54-209ENST00000583454 C10orf95Q9H7T3 257 aa9.4□□□□□ -0.9
TSEN54-209ENST00000583454 PSPHP1O15172 72 aa9.39□□□□□ -0.91
TSEN54-209ENST00000583454 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
TSEN54-209ENST00000583454 RPS28P62857 69 aaKnown RBP9.31□□□□□ -0.92
TSEN54-209ENST00000583454 KRTAP19-7Q3SYF9 63 aa9.31□□□□□ -0.92
TSEN54-209ENST00000583454 DSTQ03001 7570 aaKnown RBP9.29□□□□□ -0.92
TSEN54-209ENST00000583454 TNP1P09430 55 aa9.26□□□□□ -0.93
TSEN54-209ENST00000583454 GPR98Q8WXG9 6306 aa9.24□□□□□ -0.93
TSEN54-209ENST00000583454 LCE5AQ5TCM9 118 aa9.22□□□□□ -0.93
TSEN54-209ENST00000583454 MT1EP04732 61 aa9.21□□□□□ -0.94
TSEN54-209ENST00000583454 KRTAP19-5Q3LI72 72 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms