RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 LCE2BO14633 110 aa10.06□□□□□ -0.8
TSEN54-208ENST00000583173 USH2AO75445 5202 aa10.05□□□□□ -0.8
TSEN54-208ENST00000583173 SERP2Q8N6R1 65 aa10.04□□□□□ -0.8
TSEN54-208ENST00000583173 FSIP2Q5CZC0 6907 aa10.03□□□□□ -0.8
TSEN54-208ENST00000583173 KRTAP9-6A0A140TA67 174 aa10.02□□□□□ -0.81
TSEN54-208ENST00000583173 DMAC1Q96GE9 116 aa10.02□□□□□ -0.81
TSEN54-208ENST00000583173 CRCT1Q9UGL9 99 aa10.02□□□□□ -0.81
TSEN54-208ENST00000583173 NDUFC1O43677 76 aa9.98□□□□□ -0.81
TSEN54-208ENST00000583173 SNURFQ9Y675 71 aa9.96□□□□□ -0.82
TSEN54-208ENST00000583173 C20orf197Q8N268 126 aa9.91□□□□□ -0.82
TSEN54-208ENST00000583173 SSPOA2VEC9 5147 aa9.86□□□□□ -0.83
TSEN54-208ENST00000583173 H0YAA0 97 aa9.86□□□□□ -0.83
TSEN54-208ENST00000583173 KRTAP19-1Q8IUB9 90 aa9.86□□□□□ -0.83
TSEN54-208ENST00000583173 COX7CP15954 63 aa9.85□□□□□ -0.83
TSEN54-208ENST00000583173 ACYP2P14621 99 aa9.83□□□□□ -0.84
TSEN54-208ENST00000583173 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
TSEN54-208ENST00000583173 SPRR2GQ9BYE4 73 aa9.78□□□□□ -0.84
TSEN54-208ENST00000583173 CRIPTQ9P021 101 aa9.71□□□□□ -0.86
TSEN54-208ENST00000583173 ADM2Q7Z4H4 148 aa9.7□□□□□ -0.86
TSEN54-208ENST00000583173 CYSTM1Q9H1C7 97 aa9.68□□□□□ -0.86
TSEN54-208ENST00000583173 KRTAP19-8Q3LI54 63 aa9.67□□□□□ -0.86
TSEN54-208ENST00000583173 ANAPC13Q9BS18 74 aa9.65□□□□□ -0.86
TSEN54-208ENST00000583173 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
TSEN54-208ENST00000583173 H7BZZ5 65 aa9.63□□□□□ -0.87
TSEN54-208ENST00000583173 KRTAP19-6Q3LI70 58 aa9.63□□□□□ -0.87
TSEN54-208ENST00000583173 MT1BP07438 61 aa9.61□□□□□ -0.87
TSEN54-208ENST00000583173 FCGBPQ9Y6R7 5405 aaPredicted RBP9.6□□□□□ -0.87
TSEN54-208ENST00000583173 P0C880 135 aa9.59□□□□□ -0.87
TSEN54-208ENST00000583173 SPTSSBQ8NFR3 76 aa9.57□□□□□ -0.88
TSEN54-208ENST00000583173 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
TSEN54-208ENST00000583173 Q5VV11 94 aa9.52□□□□□ -0.89
TSEN54-208ENST00000583173 CCDC179H3BU77 68 aa9.51□□□□□ -0.89
TSEN54-208ENST00000583173 COA5Q86WW8 74 aa9.49□□□□□ -0.89
TSEN54-208ENST00000583173 R4GN34 69 aa9.38□□□□□ -0.91
TSEN54-208ENST00000583173 M0QZ58 72 aa9.33□□□□□ -0.92
TSEN54-208ENST00000583173 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.31□□□□□ -0.92
TSEN54-208ENST00000583173 KRTAP10-5P60370 271 aa9.29□□□□□ -0.92
TSEN54-208ENST00000583173 A6NN06 94 aa9.23□□□□□ -0.93
TSEN54-208ENST00000583173 ATP5EP56381 51 aaPredicted RBP9.21□□□□□ -0.94
TSEN54-208ENST00000583173 PLAC4Q8WY50 150 aa9.16□□□□□ -0.94
TSEN54-208ENST00000583173 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
TSEN54-208ENST00000583173 LINC01554Q52M75 96 aa9.14□□□□□ -0.95
TSEN54-208ENST00000583173 TMEM258P61165 79 aa9.13□□□□□ -0.95
TSEN54-208ENST00000583173 MACF1Q9UPN3 7388 aaKnown RBP9.1□□□□□ -0.95
TSEN54-208ENST00000583173 MT1XP80297 61 aa9.1□□□□□ -0.95
TSEN54-208ENST00000583173 SERP1Q9Y6X1 66 aa9.1□□□□□ -0.95
TSEN54-208ENST00000583173 SEC61GP60059 68 aa9.09□□□□□ -0.95
TSEN54-208ENST00000583173 KRTAP9-7A8MTY7 169 aa9.05□□□□□ -0.96
TSEN54-208ENST00000583173 A0A1B0GU33 70 aa8.98□□□□□ -0.97
TSEN54-208ENST00000583173 PRO2289Q9P1D8 64 aa8.98□□□□□ -0.97
TSEN54-208ENST00000583173 A0A1B0GU69 56 aa8.95□□□□□ -0.98
TSEN54-208ENST00000583173 SYNE2Q8WXH0 6885 aaKnown RBP8.95□□□□□ -0.98
TSEN54-208ENST00000583173 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
TSEN54-208ENST00000583173 LINC01558Q9Y6Z2 57 aa8.9□□□□□ -0.98
TSEN54-208ENST00000583173 KRTAP6-3Q3LI67 103 aa8.87□□□□□ -0.99
TSEN54-208ENST00000583173 KRTAP12-2P59991 146 aa8.8□□□□□ -1
TSEN54-208ENST00000583173 A0A0D9SG42 100 aa8.79□□□□□ -1
TSEN54-208ENST00000583173 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
TSEN54-208ENST00000583173 PCP4P48539 62 aa8.74□□□□□ -1.01
TSEN54-208ENST00000583173 KRTAP12-1P59990 96 aa8.73□□□□□ -1.01
TSEN54-208ENST00000583173 SMIM26A0A096LP01 95 aa8.69□□□□□ -1.02
TSEN54-208ENST00000583173 KMT2DO14686 5537 aa8.68□□□□□ -1.02
TSEN54-208ENST00000583173 A8MU10 97 aa8.67□□□□□ -1.02
TSEN54-208ENST00000583173 KRTAP10-7P60409 375 aaPredicted RBP8.67□□□□□ -1.02
TSEN54-208ENST00000583173 KRTAP5-9P26371 169 aa8.66□□□□□ -1.02
TSEN54-208ENST00000583173 KRTAP10-12P60413 245 aa8.66□□□□□ -1.02
TSEN54-208ENST00000583173 CAMK2N1Q7Z7J9 78 aa8.66□□□□□ -1.02
TSEN54-208ENST00000583173 SPINT4Q6UDR6 99 aa8.64□□□□□ -1.03
TSEN54-208ENST00000583173 KRTAP4-8A0A0G2JLE6 195 aa8.58□□□□□ -1.04
TSEN54-208ENST00000583173 Q1T7F1 81 aa8.58□□□□□ -1.04
TSEN54-208ENST00000583173 KRTAP4-8Q9BYQ9 185 aa8.58□□□□□ -1.04
TSEN54-208ENST00000583173 UQCR11O14957 56 aa8.54□□□□□ -1.04
TSEN54-208ENST00000583173 V9GYY9 64 aa8.54□□□□□ -1.04
TSEN54-208ENST00000583173 RPS28P62857 69 aaKnown RBP8.53□□□□□ -1.04
TSEN54-208ENST00000583173 MUC12Q9UKN1 5478 aa8.52□□□□□ -1.04
TSEN54-208ENST00000583173 KRTAP8-1Q8IUC2 63 aa8.5□□□□□ -1.05
TSEN54-208ENST00000583173 PSPHP1O15172 72 aa8.44□□□□□ -1.06
TSEN54-208ENST00000583173 NEBP20929 6669 aa8.42□□□□□ -1.06
TSEN54-208ENST00000583173 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.06
TSEN54-208ENST00000583173 MDN1Q9NU22 5596 aa8.39□□□□□ -1.07
TSEN54-208ENST00000583173 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
TSEN54-208ENST00000583173 C10orf95Q9H7T3 257 aa8.33□□□□□ -1.08
TSEN54-208ENST00000583173 LCE1AQ5T7P2 110 aa8.21□□□□□ -1.1
TSEN54-208ENST00000583173 SPRR2EP22531 72 aa8.17□□□□□ -1.1
TSEN54-208ENST00000583173 SPRR2BP35325 72 aa8.17□□□□□ -1.1
TSEN54-208ENST00000583173 SPRR2AP35326 72 aa8.17□□□□□ -1.1
TSEN54-208ENST00000583173 KRTAP19-7Q3SYF9 63 aa8.15□□□□□ -1.1
TSEN54-208ENST00000583173 A6NED7 52 aa8.14□□□□□ -1.11
TSEN54-208ENST00000583173 TNP1P09430 55 aa8.14□□□□□ -1.11
TSEN54-208ENST00000583173 K7ERS5 55 aa8.06□□□□□ -1.12
TSEN54-208ENST00000583173 MT1EP04732 61 aa8.03□□□□□ -1.12
TSEN54-208ENST00000583173 KRTAP19-5Q3LI72 72 aa8.01□□□□□ -1.13
TSEN54-208ENST00000583173 LCE3AQ5TA76 89 aa8□□□□□ -1.13
TSEN54-208ENST00000583173 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
TSEN54-208ENST00000583173 KRTAP2-3P0C7H8 128 aa7.91□□□□□ -1.14
TSEN54-208ENST00000583173 KRTAP2-4Q9BYR9 128 aa7.91□□□□□ -1.14
TSEN54-208ENST00000583173 CDC42SE1Q9NRR8 79 aa7.91□□□□□ -1.14
TSEN54-208ENST00000583173 KRTAP25-1Q3LHN0 102 aa7.9□□□□□ -1.14
TSEN54-208ENST00000583173 SPRR2DP22532 72 aa7.89□□□□□ -1.15
TSEN54-208ENST00000583173 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms