RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 KRTAP10-8P60410 259 aa3.79□□□□□ -1.8
NDEL1-216ENST00000583066 MPLKIPQ8TAP9 179 aa3.79□□□□□ -1.8
NDEL1-216ENST00000583066 SPINK1P00995 79 aa3.78□□□□□ -1.8
NDEL1-216ENST00000583066 LINC00313P59037 77 aa3.78□□□□□ -1.8
NDEL1-216ENST00000583066 RPS29P62273 56 aaKnown RBP3.78□□□□□ -1.8
NDEL1-216ENST00000583066 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
NDEL1-216ENST00000583066 SPAG11AQ6PDA7 123 aa3.77□□□□□ -1.81
NDEL1-216ENST00000583066 SPINK6Q6UWN8 80 aa3.77□□□□□ -1.81
NDEL1-216ENST00000583066 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
NDEL1-216ENST00000583066 PRR4Q16378 134 aa3.75□□□□□ -1.81
NDEL1-216ENST00000583066 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
NDEL1-216ENST00000583066 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
NDEL1-216ENST00000583066 COA5Q86WW8 74 aa3.75□□□□□ -1.81
NDEL1-216ENST00000583066 A0A087X002 238 aa3.74□□□□□ -1.81
NDEL1-216ENST00000583066 KRTAP1-4P0C5Y4 121 aa3.74□□□□□ -1.81
NDEL1-216ENST00000583066 ACYP2P14621 99 aa3.73□□□□□ -1.81
NDEL1-216ENST00000583066 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
NDEL1-216ENST00000583066 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
NDEL1-216ENST00000583066 TYMSOSQ8TAI1 123 aa3.73□□□□□ -1.81
NDEL1-216ENST00000583066 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
NDEL1-216ENST00000583066 LINC01558Q9Y6Z2 57 aa3.71□□□□□ -1.82
NDEL1-216ENST00000583066 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
NDEL1-216ENST00000583066 Q5W150 140 aa3.7□□□□□ -1.82
NDEL1-216ENST00000583066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.7□□□□□ -1.82
NDEL1-216ENST00000583066 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
NDEL1-216ENST00000583066 PSPHP1O15172 72 aa3.69□□□□□ -1.82
NDEL1-216ENST00000583066 HRES1P13985 223 aa3.69□□□□□ -1.82
NDEL1-216ENST00000583066 PRR26Q8N8Z3 221 aa3.69□□□□□ -1.82
NDEL1-216ENST00000583066 LINC00304Q8N9R0 145 aa3.69□□□□□ -1.82
NDEL1-216ENST00000583066 DMAC1Q96GE9 116 aa3.69□□□□□ -1.82
NDEL1-216ENST00000583066 A8MUN3 132 aa3.68□□□□□ -1.82
NDEL1-216ENST00000583066 Q5VV11 94 aa3.68□□□□□ -1.82
NDEL1-216ENST00000583066 PRR15LQ9BU68 103 aa3.68□□□□□ -1.82
NDEL1-216ENST00000583066 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
NDEL1-216ENST00000583066 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
NDEL1-216ENST00000583066 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
NDEL1-216ENST00000583066 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
NDEL1-216ENST00000583066 A6NED7 52 aa3.63□□□□□ -1.83
NDEL1-216ENST00000583066 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
NDEL1-216ENST00000583066 IGKV2D-30A0A075B6S6 120 aa3.62□□□□□ -1.83
NDEL1-216ENST00000583066 CDC42SE1Q9NRR8 79 aa3.62□□□□□ -1.83
NDEL1-216ENST00000583066 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
NDEL1-216ENST00000583066 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
NDEL1-216ENST00000583066 A8MUU9 505 aa3.6□□□□□ -1.83
NDEL1-216ENST00000583066 SYNE2Q8WXH0 6885 aaKnown RBP3.57□□□□□ -1.84
NDEL1-216ENST00000583066 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
NDEL1-216ENST00000583066 A0A1B0GU69 56 aa3.57□□□□□ -1.84
NDEL1-216ENST00000583066 RETNLBQ9BQ08 111 aa3.57□□□□□ -1.84
NDEL1-216ENST00000583066 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
NDEL1-216ENST00000583066 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
NDEL1-216ENST00000583066 LCA10Q71F78 164 aa3.56□□□□□ -1.84
NDEL1-216ENST00000583066 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
NDEL1-216ENST00000583066 USH2AO75445 5202 aa3.54□□□□□ -1.84
NDEL1-216ENST00000583066 UQCR11O14957 56 aa3.53□□□□□ -1.84
NDEL1-216ENST00000583066 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
NDEL1-216ENST00000583066 SPINK7P58062 85 aa3.52□□□□□ -1.85
NDEL1-216ENST00000583066 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
NDEL1-216ENST00000583066 MT1HP80294 61 aa3.52□□□□□ -1.85
NDEL1-216ENST00000583066 SPATA8Q6RVD6 105 aa3.52□□□□□ -1.85
NDEL1-216ENST00000583066 A6NN06 94 aa3.5□□□□□ -1.85
NDEL1-216ENST00000583066 KTN1-AS1Q86SY8 53 aa3.5□□□□□ -1.85
NDEL1-216ENST00000583066 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
NDEL1-216ENST00000583066 C9orf92A6NGG3 77 aa3.49□□□□□ -1.85
NDEL1-216ENST00000583066 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
NDEL1-216ENST00000583066 MIR22HGQ0VDD5 57 aa3.48□□□□□ -1.85
NDEL1-216ENST00000583066 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
NDEL1-216ENST00000583066 A8MU10 97 aa3.46□□□□□ -1.86
NDEL1-216ENST00000583066 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
NDEL1-216ENST00000583066 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
NDEL1-216ENST00000583066 RPL37P61927 97 aaKnown RBP3.44□□□□□ -1.86
NDEL1-216ENST00000583066 NEBP20929 6669 aa3.42□□□□□ -1.86
NDEL1-216ENST00000583066 A0A1B0GU33 70 aa3.4□□□□□ -1.87
NDEL1-216ENST00000583066 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
NDEL1-216ENST00000583066 KRTAP6-3Q3LI67 103 aa3.38□□□□□ -1.87
NDEL1-216ENST00000583066 H1FX-AS1Q4G0G2 97 aa3.38□□□□□ -1.87
NDEL1-216ENST00000583066 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
NDEL1-216ENST00000583066 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
NDEL1-216ENST00000583066 K7ERS5 55 aa3.36□□□□□ -1.87
NDEL1-216ENST00000583066 M0R2T5 61 aa3.35□□□□□ -1.87
NDEL1-216ENST00000583066 RBM12B-AS1Q9P1G2 102 aa3.34□□□□□ -1.87
NDEL1-216ENST00000583066 H0YAA0 97 aa3.33□□□□□ -1.88
NDEL1-216ENST00000583066 S4R3F8 94 aa3.33□□□□□ -1.88
NDEL1-216ENST00000583066 PRAC1Q96KF2 57 aa3.29□□□□□ -1.88
NDEL1-216ENST00000583066 CSAG1Q6PB30 78 aa3.27□□□□□ -1.89
NDEL1-216ENST00000583066 LCE1EQ5T753 118 aa3.26□□□□□ -1.89
NDEL1-216ENST00000583066 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
NDEL1-216ENST00000583066 M0QZ58 72 aa3.23□□□□□ -1.89
NDEL1-216ENST00000583066 LINC01554Q52M75 96 aa3.22□□□□□ -1.89
NDEL1-216ENST00000583066 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
NDEL1-216ENST00000583066 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
NDEL1-216ENST00000583066 ROMO1P60602 79 aa3.2□□□□□ -1.9
NDEL1-216ENST00000583066 ADM2Q7Z4H4 148 aa3.2□□□□□ -1.9
NDEL1-216ENST00000583066 MT3P25713 68 aa3.19□□□□□ -1.9
NDEL1-216ENST00000583066 KRTAP25-1Q3LHN0 102 aa3.19□□□□□ -1.9
NDEL1-216ENST00000583066 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
NDEL1-216ENST00000583066 P0C880 135 aa3.17□□□□□ -1.9
NDEL1-216ENST00000583066 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
NDEL1-216ENST00000583066 MT2AP02795 61 aa3.16□□□□□ -1.9
NDEL1-216ENST00000583066 MT1FP04733 61 aa3.15□□□□□ -1.91
NDEL1-216ENST00000583066 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms