RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
MKS1-211ENST00000581761 MUC17Q685J3 4493 aa7.51□□□□□ -1.21
MKS1-211ENST00000581761 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
MKS1-211ENST00000581761 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
MKS1-211ENST00000581761 PSPHP1O15172 72 aa7.5□□□□□ -1.21
MKS1-211ENST00000581761 PRR15LQ9BU68 103 aa7.5□□□□□ -1.21
MKS1-211ENST00000581761 H3BS24 57 aa7.46□□□□□ -1.22
MKS1-211ENST00000581761 SPTSSBQ8NFR3 76 aa7.46□□□□□ -1.22
MKS1-211ENST00000581761 FAT4Q6V0I7 4981 aa7.43□□□□□ -1.22
MKS1-211ENST00000581761 Q5VV11 94 aa7.42□□□□□ -1.22
MKS1-211ENST00000581761 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
MKS1-211ENST00000581761 KRTAP4-1Q9BYQ7 146 aa7.37□□□□□ -1.23
MKS1-211ENST00000581761 A0A1B0GU69 56 aa7.36□□□□□ -1.23
MKS1-211ENST00000581761 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
MKS1-211ENST00000581761 S4R3F8 94 aa7.36□□□□□ -1.23
MKS1-211ENST00000581761 LCA10Q71F78 164 aa7.31□□□□□ -1.24
MKS1-211ENST00000581761 SEC61GP60059 68 aa7.29□□□□□ -1.24
MKS1-211ENST00000581761 A6NED7 52 aa7.28□□□□□ -1.24
MKS1-211ENST00000581761 BRK1Q8WUW1 75 aa7.28□□□□□ -1.24
MKS1-211ENST00000581761 LCE2AQ5TA79 106 aaPredicted RBP7.25□□□□□ -1.25
MKS1-211ENST00000581761 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
MKS1-211ENST00000581761 CSAG1Q6PB30 78 aa7.15□□□□□ -1.26
MKS1-211ENST00000581761 PRO0628Q9UI54 55 aa7.15□□□□□ -1.26
MKS1-211ENST00000581761 UQCR11O14957 56 aa7.14□□□□□ -1.27
MKS1-211ENST00000581761 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
MKS1-211ENST00000581761 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
MKS1-211ENST00000581761 A8MU10 97 aa7.12□□□□□ -1.27
MKS1-211ENST00000581761 KRTAP9-2Q9BYQ4 174 aa7.12□□□□□ -1.27
MKS1-211ENST00000581761 A0A1B0GU33 70 aa7.09□□□□□ -1.27
MKS1-211ENST00000581761 MIR22HGQ0VDD5 57 aa7.09□□□□□ -1.27
MKS1-211ENST00000581761 LCE2BO14633 110 aa7.08□□□□□ -1.28
MKS1-211ENST00000581761 SPATA8Q6RVD6 105 aa7.08□□□□□ -1.28
MKS1-211ENST00000581761 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
MKS1-211ENST00000581761 ADM2Q7Z4H4 148 aa7.05□□□□□ -1.28
MKS1-211ENST00000581761 P0C880 135 aa7□□□□□ -1.29
MKS1-211ENST00000581761 MT1HP80294 61 aa7□□□□□ -1.29
MKS1-211ENST00000581761 H0YAA0 97 aa6.99□□□□□ -1.29
MKS1-211ENST00000581761 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
MKS1-211ENST00000581761 KRTAP13-4Q3LI77 160 aa6.9□□□□□ -1.3
MKS1-211ENST00000581761 M0R2T5 61 aa6.89□□□□□ -1.31
MKS1-211ENST00000581761 KRTAP9-6A0A140TA67 174 aa6.87□□□□□ -1.31
MKS1-211ENST00000581761 PMAIP1Q13794 54 aa6.87□□□□□ -1.31
MKS1-211ENST00000581761 A0A0D9SG42 100 aa6.82□□□□□ -1.32
MKS1-211ENST00000581761 A6NN06 94 aa6.82□□□□□ -1.32
MKS1-211ENST00000581761 M0QZ58 72 aa6.82□□□□□ -1.32
MKS1-211ENST00000581761 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
MKS1-211ENST00000581761 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
MKS1-211ENST00000581761 K7ERS5 55 aa6.76□□□□□ -1.33
MKS1-211ENST00000581761 R4GN34 69 aa6.76□□□□□ -1.33
MKS1-211ENST00000581761 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
MKS1-211ENST00000581761 LINC01554Q52M75 96 aa6.68□□□□□ -1.34
MKS1-211ENST00000581761 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
MKS1-211ENST00000581761 SPINT4Q6UDR6 99 aa6.65□□□□□ -1.34
MKS1-211ENST00000581761 CRIPTQ9P021 101 aa6.65□□□□□ -1.34
MKS1-211ENST00000581761 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
MKS1-211ENST00000581761 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
MKS1-211ENST00000581761 KTN1-AS1Q86SY8 53 aa6.63□□□□□ -1.35
MKS1-211ENST00000581761 MT2AP02795 61 aa6.58□□□□□ -1.36
MKS1-211ENST00000581761 MT1FP04733 61 aa6.54□□□□□ -1.36
MKS1-211ENST00000581761 USH2AO75445 5202 aa6.53□□□□□ -1.36
MKS1-211ENST00000581761 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
MKS1-211ENST00000581761 ROMO1P60602 79 aa6.5□□□□□ -1.37
MKS1-211ENST00000581761 SSPOA2VEC9 5147 aa6.48□□□□□ -1.37
MKS1-211ENST00000581761 A0A0A0MQY5 61 aa6.47□□□□□ -1.37
MKS1-211ENST00000581761 PRAC1Q96KF2 57 aa6.47□□□□□ -1.37
MKS1-211ENST00000581761 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
MKS1-211ENST00000581761 KRTAP9-3Q9BYQ3 159 aa6.45□□□□□ -1.38
MKS1-211ENST00000581761 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
MKS1-211ENST00000581761 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
MKS1-211ENST00000581761 FCGBPQ9Y6R7 5405 aaPredicted RBP6.34□□□□□ -1.39
MKS1-211ENST00000581761 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
MKS1-211ENST00000581761 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
MKS1-211ENST00000581761 KRTAP19-8Q3LI54 63 aa6.29□□□□□ -1.4
MKS1-211ENST00000581761 C10orf95Q9H7T3 257 aa6.29□□□□□ -1.4
MKS1-211ENST00000581761 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
MKS1-211ENST00000581761 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.25□□□□□ -1.41
MKS1-211ENST00000581761 MT1BP07438 61 aa6.2□□□□□ -1.42
MKS1-211ENST00000581761 KRTAP9-7A8MTY7 169 aa6.18□□□□□ -1.42
MKS1-211ENST00000581761 KRTAP19-6Q3LI70 58 aa6.12□□□□□ -1.43
MKS1-211ENST00000581761 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
MKS1-211ENST00000581761 TNP1P09430 55 aa6.07□□□□□ -1.44
MKS1-211ENST00000581761 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
MKS1-211ENST00000581761 MT1XP80297 61 aa6.02□□□□□ -1.45
MKS1-211ENST00000581761 KRTAP10-5P60370 271 aa6.01□□□□□ -1.45
MKS1-211ENST00000581761 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
MKS1-211ENST00000581761 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
MKS1-211ENST00000581761 KRTAP6-3Q3LI67 103 aa5.84□□□□□ -1.47
MKS1-211ENST00000581761 KRTAP10-7P60409 375 aaPredicted RBP5.8□□□□□ -1.48
MKS1-211ENST00000581761 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
MKS1-211ENST00000581761 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
MKS1-211ENST00000581761 MUC12Q9UKN1 5478 aa5.72□□□□□ -1.49
MKS1-211ENST00000581761 NEBP20929 6669 aa5.68□□□□□ -1.5
MKS1-211ENST00000581761 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.5
MKS1-211ENST00000581761 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
MKS1-211ENST00000581761 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
MKS1-211ENST00000581761 KMT2DO14686 5537 aa5.6□□□□□ -1.51
MKS1-211ENST00000581761 KRTAP15-1Q3LI76 137 aa5.56□□□□□ -1.52
MKS1-211ENST00000581761 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
MKS1-211ENST00000581761 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
MKS1-211ENST00000581761 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms