RNA–Protein interactions for RNA: ENST00000581080.1

RARA-AS1-201, RARA antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene RARA-AS1, Length 1,790 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-AS1-201ENST00000581080 S4R3F8 94 aa11.52□□□□□ -0.57
RARA-AS1-201ENST00000581080 LCA10Q71F78 164 aa11.5□□□□□ -0.57
RARA-AS1-201ENST00000581080 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
RARA-AS1-201ENST00000581080 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
RARA-AS1-201ENST00000581080 FAT4Q6V0I7 4981 aa11.36□□□□□ -0.59
RARA-AS1-201ENST00000581080 FLGP20930 4061 aaPredicted RBP11.31□□□□□ -0.6
RARA-AS1-201ENST00000581080 MT1HP80294 61 aa11.31□□□□□ -0.6
RARA-AS1-201ENST00000581080 CSAG1Q6PB30 78 aa11.31□□□□□ -0.6
RARA-AS1-201ENST00000581080 SMIM26A0A096LP01 95 aa11.24□□□□□ -0.61
RARA-AS1-201ENST00000581080 M0R2T5 61 aa11.18□□□□□ -0.62
RARA-AS1-201ENST00000581080 Q1T7F1 81 aa11.1□□□□□ -0.63
RARA-AS1-201ENST00000581080 LINC01558Q9Y6Z2 57 aa11.1□□□□□ -0.63
RARA-AS1-201ENST00000581080 V9GYY9 64 aa11.07□□□□□ -0.64
RARA-AS1-201ENST00000581080 H0YAA0 97 aa11.04□□□□□ -0.64
RARA-AS1-201ENST00000581080 LCE2AQ5TA79 106 aaPredicted RBP11.04□□□□□ -0.64
RARA-AS1-201ENST00000581080 SEC61GP60059 68 aa11.01□□□□□ -0.65
RARA-AS1-201ENST00000581080 A0A1B0GU69 56 aa11□□□□□ -0.65
RARA-AS1-201ENST00000581080 ADM2Q7Z4H4 148 aa10.99□□□□□ -0.65
RARA-AS1-201ENST00000581080 KRTAP3-2Q9BYR7 98 aa10.97□□□□□ -0.65
RARA-AS1-201ENST00000581080 KRTAP10-6P60371 365 aaPredicted RBP10.93□□□□□ -0.66
RARA-AS1-201ENST00000581080 PRR15LQ9BU68 103 aa10.93□□□□□ -0.66
RARA-AS1-201ENST00000581080 PSPHP1O15172 72 aa10.9□□□□□ -0.66
RARA-AS1-201ENST00000581080 P0C880 135 aa10.9□□□□□ -0.67
RARA-AS1-201ENST00000581080 LORP23490 312 aaPredicted RBP10.88□□□□□ -0.67
RARA-AS1-201ENST00000581080 KRTAP9-8Q9BYQ0 159 aa10.87□□□□□ -0.67
RARA-AS1-201ENST00000581080 Q5VV11 94 aa10.8□□□□□ -0.68
RARA-AS1-201ENST00000581080 MT2AP02795 61 aa10.8□□□□□ -0.68
RARA-AS1-201ENST00000581080 A0A1B0GU33 70 aa10.75□□□□□ -0.69
RARA-AS1-201ENST00000581080 MT1FP04733 61 aa10.73□□□□□ -0.69
RARA-AS1-201ENST00000581080 KRTAP10-10P60014 251 aa10.7□□□□□ -0.7
RARA-AS1-201ENST00000581080 CRIPTQ9P021 101 aa10.65□□□□□ -0.71
RARA-AS1-201ENST00000581080 UQCR11O14957 56 aa10.63□□□□□ -0.71
RARA-AS1-201ENST00000581080 R4GN34 69 aa10.62□□□□□ -0.71
RARA-AS1-201ENST00000581080 M0QZ58 72 aa10.62□□□□□ -0.71
RARA-AS1-201ENST00000581080 SVIPQ8NHG7 77 aa10.62□□□□□ -0.71
RARA-AS1-201ENST00000581080 KRTAP13-4Q3LI77 160 aa10.6□□□□□ -0.71
RARA-AS1-201ENST00000581080 SPATA8Q6RVD6 105 aa10.58□□□□□ -0.72
RARA-AS1-201ENST00000581080 A6NED7 52 aa10.57□□□□□ -0.72
RARA-AS1-201ENST00000581080 BRK1Q8WUW1 75 aa10.5□□□□□ -0.73
RARA-AS1-201ENST00000581080 MIR22HGQ0VDD5 57 aa10.49□□□□□ -0.73
RARA-AS1-201ENST00000581080 SPRR2GQ9BYE4 73 aa10.49□□□□□ -0.73
RARA-AS1-201ENST00000581080 KRTAP9-3Q9BYQ3 159 aa10.49□□□□□ -0.73
RARA-AS1-201ENST00000581080 PRO0628Q9UI54 55 aa10.49□□□□□ -0.73
RARA-AS1-201ENST00000581080 KRTAP19-1Q8IUB9 90 aa10.47□□□□□ -0.73
RARA-AS1-201ENST00000581080 LINC01554Q52M75 96 aa10.4□□□□□ -0.74
RARA-AS1-201ENST00000581080 A8MU10 97 aa10.39□□□□□ -0.75
RARA-AS1-201ENST00000581080 A0A0D9SG42 100 aa10.37□□□□□ -0.75
RARA-AS1-201ENST00000581080 CDC42SE1Q9NRR8 79 aa10.35□□□□□ -0.75
RARA-AS1-201ENST00000581080 KRTAP19-8Q3LI54 63 aa10.24□□□□□ -0.77
RARA-AS1-201ENST00000581080 A6NN06 94 aa10.23□□□□□ -0.77
RARA-AS1-201ENST00000581080 LCE2BO14633 110 aa10.22□□□□□ -0.77
RARA-AS1-201ENST00000581080 KRTAP12-1P59990 96 aa10.18□□□□□ -0.78
RARA-AS1-201ENST00000581080 KRTAP12-2P59991 146 aa10.15□□□□□ -0.78
RARA-AS1-201ENST00000581080 SPINT4Q6UDR6 99 aa10.15□□□□□ -0.78
RARA-AS1-201ENST00000581080 MT1BP07438 61 aa10.11□□□□□ -0.79
RARA-AS1-201ENST00000581080 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
RARA-AS1-201ENST00000581080 PLAC4Q8WY50 150 aa10.07□□□□□ -0.8
RARA-AS1-201ENST00000581080 K7ERS5 55 aa10.05□□□□□ -0.8
RARA-AS1-201ENST00000581080 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
RARA-AS1-201ENST00000581080 CAMK2N1Q7Z7J9 78 aa9.91□□□□□ -0.82
RARA-AS1-201ENST00000581080 USH2AO75445 5202 aa9.89□□□□□ -0.83
RARA-AS1-201ENST00000581080 KRTAP9-2Q9BYQ4 174 aa9.83□□□□□ -0.84
RARA-AS1-201ENST00000581080 FSIP2Q5CZC0 6907 aa9.78□□□□□ -0.84
RARA-AS1-201ENST00000581080 MT1XP80297 61 aa9.73□□□□□ -0.85
RARA-AS1-201ENST00000581080 KRTAP10-5P60370 271 aa9.72□□□□□ -0.85
RARA-AS1-201ENST00000581080 PRO2289Q9P1D8 64 aa9.67□□□□□ -0.86
RARA-AS1-201ENST00000581080 KTN1-AS1Q86SY8 53 aa9.66□□□□□ -0.86
RARA-AS1-201ENST00000581080 KRTAP19-6Q3LI70 58 aa9.65□□□□□ -0.86
RARA-AS1-201ENST00000581080 C10orf95Q9H7T3 257 aa9.65□□□□□ -0.86
RARA-AS1-201ENST00000581080 SSPOA2VEC9 5147 aa9.62□□□□□ -0.87
RARA-AS1-201ENST00000581080 ROMO1P60602 79 aa9.6□□□□□ -0.87
RARA-AS1-201ENST00000581080 CRCT1Q9UGL9 99 aa9.45□□□□□ -0.9
RARA-AS1-201ENST00000581080 TNP1P09430 55 aa9.4□□□□□ -0.9
RARA-AS1-201ENST00000581080 KRTAP25-1Q3LHN0 102 aa9.36□□□□□ -0.91
RARA-AS1-201ENST00000581080 KRTAP10-7P60409 375 aaPredicted RBP9.33□□□□□ -0.92
RARA-AS1-201ENST00000581080 PRAC1Q96KF2 57 aa9.27□□□□□ -0.92
RARA-AS1-201ENST00000581080 FCGBPQ9Y6R7 5405 aaPredicted RBP9.27□□□□□ -0.93
RARA-AS1-201ENST00000581080 KRTAP10-12P60413 245 aa9.24□□□□□ -0.93
RARA-AS1-201ENST00000581080 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
RARA-AS1-201ENST00000581080 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
RARA-AS1-201ENST00000581080 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
RARA-AS1-201ENST00000581080 LCE3AQ5TA76 89 aa9.04□□□□□ -0.96
RARA-AS1-201ENST00000581080 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
RARA-AS1-201ENST00000581080 PP632Q6XCG6 107 aa8.99□□□□□ -0.97
RARA-AS1-201ENST00000581080 KMT2DO14686 5537 aa8.97□□□□□ -0.97
RARA-AS1-201ENST00000581080 MACF1Q9UPN3 7388 aaKnown RBP8.9□□□□□ -0.98
RARA-AS1-201ENST00000581080 KRTAP8-1Q8IUC2 63 aa8.86□□□□□ -0.99
RARA-AS1-201ENST00000581080 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.76□□□□□ -1.01
RARA-AS1-201ENST00000581080 KRTAP19-5Q3LI72 72 aa8.73□□□□□ -1.01
RARA-AS1-201ENST00000581080 KRTAP12-3P60328 96 aa8.7□□□□□ -1.02
RARA-AS1-201ENST00000581080 KRTAP19-7Q3SYF9 63 aa8.7□□□□□ -1.02
RARA-AS1-201ENST00000581080 SYNE2Q8WXH0 6885 aaKnown RBP8.68□□□□□ -1.02
RARA-AS1-201ENST00000581080 MT1EP04732 61 aa8.55□□□□□ -1.04
RARA-AS1-201ENST00000581080 KRTAP5-9P26371 169 aa8.55□□□□□ -1.04
RARA-AS1-201ENST00000581080 SPRR2FQ96RM1 72 aa8.55□□□□□ -1.04
RARA-AS1-201ENST00000581080 KRTAP6-3Q3LI67 103 aa8.49□□□□□ -1.05
RARA-AS1-201ENST00000581080 KRTAP15-1Q3LI76 137 aa8.47□□□□□ -1.05
RARA-AS1-201ENST00000581080 MUC12Q9UKN1 5478 aa8.34□□□□□ -1.07
RARA-AS1-201ENST00000581080 KRTAP9-7A8MTY7 169 aa8.34□□□□□ -1.07
RARA-AS1-201ENST00000581080 MT1LQ93083 61 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms