RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
CDK5RAP3-217ENST00000580287 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
CDK5RAP3-217ENST00000580287 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
CDK5RAP3-217ENST00000580287 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
CDK5RAP3-217ENST00000580287 ACYP2P14621 99 aa6.96□□□□□ -1.3
CDK5RAP3-217ENST00000580287 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
CDK5RAP3-217ENST00000580287 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
CDK5RAP3-217ENST00000580287 DMAC1Q96GE9 116 aa6.93□□□□□ -1.3
CDK5RAP3-217ENST00000580287 LPAP08519 4548 aa6.92□□□□□ -1.3
CDK5RAP3-217ENST00000580287 HERC1Q15751 4861 aa6.9□□□□□ -1.31
CDK5RAP3-217ENST00000580287 A0A1B0GU69 56 aa6.87□□□□□ -1.31
CDK5RAP3-217ENST00000580287 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.31
CDK5RAP3-217ENST00000580287 LRP2P98164 4655 aa6.83□□□□□ -1.32
CDK5RAP3-217ENST00000580287 LUZP6Q538Z0 58 aa6.83□□□□□ -1.32
CDK5RAP3-217ENST00000580287 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
CDK5RAP3-217ENST00000580287 XP32Q5T750 250 aa6.79□□□□□ -1.32
CDK5RAP3-217ENST00000580287 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
CDK5RAP3-217ENST00000580287 A8MUU9 505 aa6.78□□□□□ -1.32
CDK5RAP3-217ENST00000580287 UQCR11O14957 56 aa6.77□□□□□ -1.33
CDK5RAP3-217ENST00000580287 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
CDK5RAP3-217ENST00000580287 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
CDK5RAP3-217ENST00000580287 ROMO1P60602 79 aa6.7□□□□□ -1.34
CDK5RAP3-217ENST00000580287 RPL37P61927 97 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-217ENST00000580287 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
CDK5RAP3-217ENST00000580287 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
CDK5RAP3-217ENST00000580287 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
CDK5RAP3-217ENST00000580287 MUC2Q02817 5179 aa6.63□□□□□ -1.35
CDK5RAP3-217ENST00000580287 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
CDK5RAP3-217ENST00000580287 P0C880 135 aa6.58□□□□□ -1.36
CDK5RAP3-217ENST00000580287 K7ERS5 55 aa6.54□□□□□ -1.36
CDK5RAP3-217ENST00000580287 H0YAA0 97 aa6.53□□□□□ -1.36
CDK5RAP3-217ENST00000580287 COX6B2Q6YFQ2 88 aa6.52□□□□□ -1.37
CDK5RAP3-217ENST00000580287 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
CDK5RAP3-217ENST00000580287 UBR4Q5T4S7 5183 aa6.51□□□□□ -1.37
CDK5RAP3-217ENST00000580287 RNF213Q63HN8 5207 aa6.46□□□□□ -1.38
CDK5RAP3-217ENST00000580287 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
CDK5RAP3-217ENST00000580287 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
CDK5RAP3-217ENST00000580287 A0A1B0GU33 70 aa6.43□□□□□ -1.38
CDK5RAP3-217ENST00000580287 NDUFAF8A1L188 74 aa6.43□□□□□ -1.38
CDK5RAP3-217ENST00000580287 H1FX-AS1Q4G0G2 97 aa6.42□□□□□ -1.38
CDK5RAP3-217ENST00000580287 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
CDK5RAP3-217ENST00000580287 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
CDK5RAP3-217ENST00000580287 S4R3F8 94 aa6.34□□□□□ -1.39
CDK5RAP3-217ENST00000580287 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
CDK5RAP3-217ENST00000580287 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
CDK5RAP3-217ENST00000580287 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
CDK5RAP3-217ENST00000580287 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
CDK5RAP3-217ENST00000580287 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
CDK5RAP3-217ENST00000580287 A0A0D9SG42 100 aa6.23□□□□□ -1.41
CDK5RAP3-217ENST00000580287 KRTAP10-6P60371 365 aaPredicted RBP6.23□□□□□ -1.41
CDK5RAP3-217ENST00000580287 LCE2BO14633 110 aa6.15□□□□□ -1.42
CDK5RAP3-217ENST00000580287 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
CDK5RAP3-217ENST00000580287 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
CDK5RAP3-217ENST00000580287 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
CDK5RAP3-217ENST00000580287 MT1HP80294 61 aa6.01□□□□□ -1.45
CDK5RAP3-217ENST00000580287 KRTAP12-2P59991 146 aa6□□□□□ -1.45
CDK5RAP3-217ENST00000580287 M0R2T5 61 aa5.99□□□□□ -1.45
CDK5RAP3-217ENST00000580287 KRTAP15-1Q3LI76 137 aa5.94□□□□□ -1.46
CDK5RAP3-217ENST00000580287 M0QZ58 72 aa5.92□□□□□ -1.46
CDK5RAP3-217ENST00000580287 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
CDK5RAP3-217ENST00000580287 R4GN34 69 aa5.91□□□□□ -1.46
CDK5RAP3-217ENST00000580287 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.47
CDK5RAP3-217ENST00000580287 KRTAP9-8Q9BYQ0 159 aa5.79□□□□□ -1.48
CDK5RAP3-217ENST00000580287 MT2AP02795 61 aa5.77□□□□□ -1.49
CDK5RAP3-217ENST00000580287 MT1FP04733 61 aa5.76□□□□□ -1.49
CDK5RAP3-217ENST00000580287 KRTAP10-10P60014 251 aa5.74□□□□□ -1.49
CDK5RAP3-217ENST00000580287 KRTAP19-1Q8IUB9 90 aa5.63□□□□□ -1.51
CDK5RAP3-217ENST00000580287 PRO2289Q9P1D8 64 aa5.61□□□□□ -1.51
CDK5RAP3-217ENST00000580287 KRTAP9-3Q9BYQ3 159 aa5.57□□□□□ -1.52
CDK5RAP3-217ENST00000580287 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
CDK5RAP3-217ENST00000580287 PLAC4Q8WY50 150 aa5.55□□□□□ -1.52
CDK5RAP3-217ENST00000580287 USH2AO75445 5202 aa5.54□□□□□ -1.52
CDK5RAP3-217ENST00000580287 FSIP2Q5CZC0 6907 aa5.48□□□□□ -1.53
CDK5RAP3-217ENST00000580287 MT1BP07438 61 aa5.42□□□□□ -1.54
CDK5RAP3-217ENST00000580287 KRTAP19-8Q3LI54 63 aa5.41□□□□□ -1.54
CDK5RAP3-217ENST00000580287 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
CDK5RAP3-217ENST00000580287 TNP1P09430 55 aa5.31□□□□□ -1.56
CDK5RAP3-217ENST00000580287 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
CDK5RAP3-217ENST00000580287 MT1XP80297 61 aa5.24□□□□□ -1.57
CDK5RAP3-217ENST00000580287 KRTAP10-5P60370 271 aa5.23□□□□□ -1.57
CDK5RAP3-217ENST00000580287 SPRR5A0A1B0GTR4 108 aa5.13□□□□□ -1.59
CDK5RAP3-217ENST00000580287 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
CDK5RAP3-217ENST00000580287 KMT2DO14686 5537 aa5.09□□□□□ -1.59
CDK5RAP3-217ENST00000580287 KRTAP10-7P60409 375 aaPredicted RBP5.08□□□□□ -1.6
CDK5RAP3-217ENST00000580287 LCE3AQ5TA76 89 aa5.06□□□□□ -1.6
CDK5RAP3-217ENST00000580287 KRTAP19-6Q3LI70 58 aa5.04□□□□□ -1.6
CDK5RAP3-217ENST00000580287 FCGBPQ9Y6R7 5405 aaPredicted RBP5.03□□□□□ -1.6
CDK5RAP3-217ENST00000580287 INE1O15225 51 aa5.03□□□□□ -1.6
CDK5RAP3-217ENST00000580287 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
CDK5RAP3-217ENST00000580287 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
CDK5RAP3-217ENST00000580287 KRTAP10-12P60413 245 aa4.94□□□□□ -1.62
CDK5RAP3-217ENST00000580287 CRCT1Q9UGL9 99 aa4.92□□□□□ -1.62
CDK5RAP3-217ENST00000580287 KRTAP8-1Q8IUC2 63 aa4.87□□□□□ -1.63
CDK5RAP3-217ENST00000580287 MACF1Q9UPN3 7388 aaKnown RBP4.85□□□□□ -1.63
CDK5RAP3-217ENST00000580287 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
CDK5RAP3-217ENST00000580287 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
CDK5RAP3-217ENST00000580287 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
CDK5RAP3-217ENST00000580287 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
CDK5RAP3-217ENST00000580287 KRTAP9-6A0A140TA67 174 aa4.7□□□□□ -1.66
CDK5RAP3-217ENST00000580287 MUC12Q9UKN1 5478 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms