RNA–Protein interactions for RNA: ENST00000578780.2

RTTN-202, Transcript of rotatin, humanhuman

TSL 5 BASIC

Gene RTTN, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-202ENST00000578780 SPINT4Q6UDR6 99 aa5.53□□□□□ -1.52
RTTN-202ENST00000578780 KRTAP15-1Q3LI76 137 aa5.52□□□□□ -1.53
RTTN-202ENST00000578780 RYR1P21817 5038 aa5.51□□□□□ -1.53
RTTN-202ENST00000578780 Q8N1X5 172 aa5.51□□□□□ -1.53
RTTN-202ENST00000578780 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
RTTN-202ENST00000578780 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
RTTN-202ENST00000578780 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
RTTN-202ENST00000578780 IGKV2D-30A0A075B6S6 120 aa5.48□□□□□ -1.53
RTTN-202ENST00000578780 KIAA1109Q2LD37 5005 aa5.48□□□□□ -1.53
RTTN-202ENST00000578780 A0A1B0GU33 70 aa5.46□□□□□ -1.54
RTTN-202ENST00000578780 TPRXLQ17RH7 258 aa5.45□□□□□ -1.54
RTTN-202ENST00000578780 LRP1Q07954 4544 aaKnown RBP5.44□□□□□ -1.54
RTTN-202ENST00000578780 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
RTTN-202ENST00000578780 H1FX-AS1Q4G0G2 97 aa5.42□□□□□ -1.54
RTTN-202ENST00000578780 C9orf92A6NGG3 77 aa5.41□□□□□ -1.54
RTTN-202ENST00000578780 TNXBP22105 4242 aa5.39□□□□□ -1.55
RTTN-202ENST00000578780 MT1HL1P0DM35 61 aa5.39□□□□□ -1.55
RTTN-202ENST00000578780 K7ERS5 55 aa5.37□□□□□ -1.55
RTTN-202ENST00000578780 KRTAP4-5Q9BYR2 181 aa5.37□□□□□ -1.55
RTTN-202ENST00000578780 FAT3Q8TDW7 4589 aa5.37□□□□□ -1.55
RTTN-202ENST00000578780 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
RTTN-202ENST00000578780 MYCBP2O75592 4640 aa5.34□□□□□ -1.56
RTTN-202ENST00000578780 LUZP6Q538Z0 58 aa5.33□□□□□ -1.56
RTTN-202ENST00000578780 DMBT1Q9UGM3 2413 aaPredicted RBP5.32□□□□□ -1.56
RTTN-202ENST00000578780 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
RTTN-202ENST00000578780 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
RTTN-202ENST00000578780 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
RTTN-202ENST00000578780 J3QL48 77 aa5.22□□□□□ -1.57
RTTN-202ENST00000578780 KRTAP3-1Q9BYR8 98 aa5.22□□□□□ -1.57
RTTN-202ENST00000578780 BIRC6Q9NR09 4857 aa5.21□□□□□ -1.58
RTTN-202ENST00000578780 ABCA13Q86UQ4 5058 aa5.19□□□□□ -1.58
RTTN-202ENST00000578780 HERC2O95714 4834 aa5.18□□□□□ -1.58
RTTN-202ENST00000578780 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.59
RTTN-202ENST00000578780 A0A0D9SG42 100 aa5.13□□□□□ -1.59
RTTN-202ENST00000578780 KRTAP10-6P60371 365 aaPredicted RBP5.09□□□□□ -1.59
RTTN-202ENST00000578780 SEC61BP60468 96 aaKnown RBP5.08□□□□□ -1.6
RTTN-202ENST00000578780 LPAP08519 4548 aa5.07□□□□□ -1.6
RTTN-202ENST00000578780 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
RTTN-202ENST00000578780 S4R3F8 94 aa5.05□□□□□ -1.6
RTTN-202ENST00000578780 LRP2P98164 4655 aa5.04□□□□□ -1.6
RTTN-202ENST00000578780 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
RTTN-202ENST00000578780 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
RTTN-202ENST00000578780 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
RTTN-202ENST00000578780 KRTAP3-3Q9BYR6 98 aa4.94□□□□□ -1.62
RTTN-202ENST00000578780 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
RTTN-202ENST00000578780 KRTAP4-1Q9BYQ7 146 aa4.91□□□□□ -1.62
RTTN-202ENST00000578780 HERC1Q15751 4861 aa4.89□□□□□ -1.63
RTTN-202ENST00000578780 MUC17Q685J3 4493 aa4.84□□□□□ -1.63
RTTN-202ENST00000578780 HMCN2Q8NDA2 5059 aa4.84□□□□□ -1.63
RTTN-202ENST00000578780 KRTAP19-2Q3LHN2 52 aa4.78□□□□□ -1.64
RTTN-202ENST00000578780 MUC2Q02817 5179 aa4.75□□□□□ -1.65
RTTN-202ENST00000578780 LCE2DQ5TA82 110 aaPredicted RBP4.74□□□□□ -1.65
RTTN-202ENST00000578780 CAMK2N1Q7Z7J9 78 aa4.73□□□□□ -1.65
RTTN-202ENST00000578780 M0QZ58 72 aa4.66□□□□□ -1.66
RTTN-202ENST00000578780 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
RTTN-202ENST00000578780 UBR4Q5T4S7 5183 aa4.64□□□□□ -1.67
RTTN-202ENST00000578780 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
RTTN-202ENST00000578780 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
RTTN-202ENST00000578780 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
RTTN-202ENST00000578780 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
RTTN-202ENST00000578780 RNF213Q63HN8 5207 aa4.6□□□□□ -1.67
RTTN-202ENST00000578780 FLGP20930 4061 aaPredicted RBP4.58□□□□□ -1.68
RTTN-202ENST00000578780 LORP23490 312 aaPredicted RBP4.54□□□□□ -1.68
RTTN-202ENST00000578780 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
RTTN-202ENST00000578780 MT1HP80294 61 aa4.54□□□□□ -1.68
RTTN-202ENST00000578780 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
RTTN-202ENST00000578780 R4GN34 69 aa4.54□□□□□ -1.68
RTTN-202ENST00000578780 M0R2T5 61 aa4.53□□□□□ -1.68
RTTN-202ENST00000578780 FAT4Q6V0I7 4981 aa4.53□□□□□ -1.68
RTTN-202ENST00000578780 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
RTTN-202ENST00000578780 KRTAP9-6A0A140TA67 174 aa4.45□□□□□ -1.7
RTTN-202ENST00000578780 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
RTTN-202ENST00000578780 INE1O15225 51 aa4.41□□□□□ -1.7
RTTN-202ENST00000578780 MT2AP02795 61 aa4.38□□□□□ -1.71
RTTN-202ENST00000578780 KRTAP10-10P60014 251 aa4.37□□□□□ -1.71
RTTN-202ENST00000578780 MT1FP04733 61 aa4.36□□□□□ -1.71
RTTN-202ENST00000578780 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
RTTN-202ENST00000578780 SPRR2GQ9BYE4 73 aa4.33□□□□□ -1.72
RTTN-202ENST00000578780 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
RTTN-202ENST00000578780 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
RTTN-202ENST00000578780 LCE3BQ5TA77 95 aa4.26□□□□□ -1.73
RTTN-202ENST00000578780 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
RTTN-202ENST00000578780 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
RTTN-202ENST00000578780 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
RTTN-202ENST00000578780 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
RTTN-202ENST00000578780 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
RTTN-202ENST00000578780 TNP1P09430 55 aa4.18□□□□□ -1.74
RTTN-202ENST00000578780 MT1BP07438 61 aa4.15□□□□□ -1.75
RTTN-202ENST00000578780 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
RTTN-202ENST00000578780 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
RTTN-202ENST00000578780 LCE2BO14633 110 aa4.09□□□□□ -1.75
RTTN-202ENST00000578780 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
RTTN-202ENST00000578780 MT1XP80297 61 aa4.03□□□□□ -1.76
RTTN-202ENST00000578780 LCE1DQ5T752 114 aa4.03□□□□□ -1.76
RTTN-202ENST00000578780 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
RTTN-202ENST00000578780 USH2AO75445 5202 aa3.93□□□□□ -1.78
RTTN-202ENST00000578780 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
RTTN-202ENST00000578780 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
RTTN-202ENST00000578780 KRTAP8-1Q8IUC2 63 aa3.82□□□□□ -1.8
RTTN-202ENST00000578780 KRTAP19-6Q3LI70 58 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms