RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 PKHD1L1Q86WI1 4243 aa6□□□□□ -1.45
SKA2-204ENST00000578519 RPL37P61927 97 aaKnown RBP5.99□□□□□ -1.45
SKA2-204ENST00000578519 SPTSSBQ8NFR3 76 aa5.99□□□□□ -1.45
SKA2-204ENST00000578519 SPINK7P58062 85 aa5.98□□□□□ -1.45
SKA2-204ENST00000578519 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.45
SKA2-204ENST00000578519 LINC01558Q9Y6Z2 57 aa5.95□□□□□ -1.46
SKA2-204ENST00000578519 FAT1Q14517 4588 aa5.95□□□□□ -1.46
SKA2-204ENST00000578519 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
SKA2-204ENST00000578519 PRR15LQ9BU68 103 aa5.93□□□□□ -1.46
SKA2-204ENST00000578519 RYR1P21817 5038 aa5.93□□□□□ -1.46
SKA2-204ENST00000578519 HSPG2P98160 4391 aa5.9□□□□□ -1.47
SKA2-204ENST00000578519 PSPHP1O15172 72 aa5.89□□□□□ -1.47
SKA2-204ENST00000578519 COX6B2Q6YFQ2 88 aa5.88□□□□□ -1.47
SKA2-204ENST00000578519 RYR3Q15413 4870 aa5.88□□□□□ -1.47
SKA2-204ENST00000578519 SEC61GP60059 68 aa5.86□□□□□ -1.47
SKA2-204ENST00000578519 DMBT1Q9UGM3 2413 aaPredicted RBP5.83□□□□□ -1.48
SKA2-204ENST00000578519 A0A1B0GU69 56 aa5.83□□□□□ -1.48
SKA2-204ENST00000578519 Q5VV11 94 aa5.83□□□□□ -1.48
SKA2-204ENST00000578519 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
SKA2-204ENST00000578519 BRK1Q8WUW1 75 aa5.82□□□□□ -1.48
SKA2-204ENST00000578519 SEC61BP60468 96 aaKnown RBP5.81□□□□□ -1.48
SKA2-204ENST00000578519 TNXBP22105 4242 aa5.8□□□□□ -1.48
SKA2-204ENST00000578519 A6NED7 52 aa5.79□□□□□ -1.48
SKA2-204ENST00000578519 RBM12B-AS1Q9P1G2 102 aa5.78□□□□□ -1.48
SKA2-204ENST00000578519 FAT3Q8TDW7 4589 aa5.76□□□□□ -1.49
SKA2-204ENST00000578519 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
SKA2-204ENST00000578519 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
SKA2-204ENST00000578519 LRP1Q07954 4544 aaKnown RBP5.72□□□□□ -1.49
SKA2-204ENST00000578519 UQCR11O14957 56 aa5.71□□□□□ -1.5
SKA2-204ENST00000578519 H1FX-AS1Q4G0G2 97 aa5.71□□□□□ -1.5
SKA2-204ENST00000578519 CDC42SE1Q9NRR8 79 aa5.71□□□□□ -1.5
SKA2-204ENST00000578519 S4R3F8 94 aa5.7□□□□□ -1.5
SKA2-204ENST00000578519 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
SKA2-204ENST00000578519 EPPK1P58107 5090 aaKnown RBP5.68□□□□□ -1.5
SKA2-204ENST00000578519 H3BS24 57 aa5.66□□□□□ -1.5
SKA2-204ENST00000578519 MIR22HGQ0VDD5 57 aa5.63□□□□□ -1.51
SKA2-204ENST00000578519 SPATA8Q6RVD6 105 aa5.61□□□□□ -1.51
SKA2-204ENST00000578519 LCA10Q71F78 164 aa5.61□□□□□ -1.51
SKA2-204ENST00000578519 CSAG1Q6PB30 78 aa5.6□□□□□ -1.51
SKA2-204ENST00000578519 A0A1B0GU33 70 aa5.59□□□□□ -1.51
SKA2-204ENST00000578519 BIRC6Q9NR09 4857 aa5.59□□□□□ -1.52
SKA2-204ENST00000578519 KTN1-AS1Q86SY8 53 aa5.56□□□□□ -1.52
SKA2-204ENST00000578519 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
SKA2-204ENST00000578519 HERC2O95714 4834 aa5.51□□□□□ -1.53
SKA2-204ENST00000578519 K7ERS5 55 aa5.49□□□□□ -1.53
SKA2-204ENST00000578519 H0YAA0 97 aa5.47□□□□□ -1.53
SKA2-204ENST00000578519 A8MU10 97 aa5.46□□□□□ -1.54
SKA2-204ENST00000578519 A6NN06 94 aa5.44□□□□□ -1.54
SKA2-204ENST00000578519 ADM2Q7Z4H4 148 aa5.43□□□□□ -1.54
SKA2-204ENST00000578519 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
SKA2-204ENST00000578519 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
SKA2-204ENST00000578519 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
SKA2-204ENST00000578519 M0QZ58 72 aa5.4□□□□□ -1.54
SKA2-204ENST00000578519 P0C880 135 aa5.34□□□□□ -1.55
SKA2-204ENST00000578519 LRP2P98164 4655 aa5.33□□□□□ -1.56
SKA2-204ENST00000578519 MUC17Q685J3 4493 aa5.32□□□□□ -1.56
SKA2-204ENST00000578519 LPAP08519 4548 aa5.31□□□□□ -1.56
SKA2-204ENST00000578519 KRTAP19-2Q3LHN2 52 aa5.29□□□□□ -1.56
SKA2-204ENST00000578519 R4GN34 69 aa5.29□□□□□ -1.56
SKA2-204ENST00000578519 A0A0D9SG42 100 aa5.27□□□□□ -1.57
SKA2-204ENST00000578519 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
SKA2-204ENST00000578519 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
SKA2-204ENST00000578519 SPINT4Q6UDR6 99 aa5.19□□□□□ -1.58
SKA2-204ENST00000578519 M0R2T5 61 aa5.17□□□□□ -1.58
SKA2-204ENST00000578519 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
SKA2-204ENST00000578519 ROMO1P60602 79 aa5.16□□□□□ -1.58
SKA2-204ENST00000578519 HERC1Q15751 4861 aa5.15□□□□□ -1.58
SKA2-204ENST00000578519 LINC01554Q52M75 96 aa5.14□□□□□ -1.59
SKA2-204ENST00000578519 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
SKA2-204ENST00000578519 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
SKA2-204ENST00000578519 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
SKA2-204ENST00000578519 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
SKA2-204ENST00000578519 MT1HP80294 61 aa5.06□□□□□ -1.6
SKA2-204ENST00000578519 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
SKA2-204ENST00000578519 FLGP20930 4061 aaPredicted RBP5□□□□□ -1.61
SKA2-204ENST00000578519 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
SKA2-204ENST00000578519 CAMK2N1Q7Z7J9 78 aa4.99□□□□□ -1.61
SKA2-204ENST00000578519 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
SKA2-204ENST00000578519 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
SKA2-204ENST00000578519 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
SKA2-204ENST00000578519 MT2AP02795 61 aa4.9□□□□□ -1.63
SKA2-204ENST00000578519 MT1FP04733 61 aa4.85□□□□□ -1.63
SKA2-204ENST00000578519 MUC2Q02817 5179 aa4.83□□□□□ -1.64
SKA2-204ENST00000578519 RNF213Q63HN8 5207 aa4.82□□□□□ -1.64
SKA2-204ENST00000578519 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
SKA2-204ENST00000578519 PP632Q6XCG6 107 aa4.8□□□□□ -1.64
SKA2-204ENST00000578519 TNP1P09430 55 aa4.79□□□□□ -1.64
SKA2-204ENST00000578519 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
SKA2-204ENST00000578519 UBR4Q5T4S7 5183 aa4.75□□□□□ -1.65
SKA2-204ENST00000578519 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
SKA2-204ENST00000578519 FAT4Q6V0I7 4981 aa4.72□□□□□ -1.65
SKA2-204ENST00000578519 KRTAP5-11Q6L8G4 156 aa4.68□□□□□ -1.66
SKA2-204ENST00000578519 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
SKA2-204ENST00000578519 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
SKA2-204ENST00000578519 MT1BP07438 61 aa4.63□□□□□ -1.67
SKA2-204ENST00000578519 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
SKA2-204ENST00000578519 KRTAP10-5P60370 271 aa4.52□□□□□ -1.69
SKA2-204ENST00000578519 MT1XP80297 61 aa4.52□□□□□ -1.69
SKA2-204ENST00000578519 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
SKA2-204ENST00000578519 LCE3AQ5TA76 89 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms