RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 S4R3F8 94 aa9.28□□□□□ -0.92
TSEN54-205ENST00000578415 CSAG1Q6PB30 78 aa9.27□□□□□ -0.93
TSEN54-205ENST00000578415 CASC2Q6XLA1 102 aa9.26□□□□□ -0.93
TSEN54-205ENST00000578415 HIST1H4AP62805 103 aaKnown RBP9.25□□□□□ -0.93
TSEN54-205ENST00000578415 LCA10Q71F78 164 aa9.24□□□□□ -0.93
TSEN54-205ENST00000578415 KLKP1Q107X0 134 aa9.22□□□□□ -0.93
TSEN54-205ENST00000578415 MT-ATP8P03928 68 aa9.19□□□□□ -0.94
TSEN54-205ENST00000578415 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
TSEN54-205ENST00000578415 A0A087WVE0 104 aa9.16□□□□□ -0.94
TSEN54-205ENST00000578415 KRTAP2-3P0C7H8 128 aa9.15□□□□□ -0.94
TSEN54-205ENST00000578415 KRTAP2-4Q9BYR9 128 aa9.15□□□□□ -0.94
TSEN54-205ENST00000578415 IMUPQ9GZP8 106 aa9.11□□□□□ -0.95
TSEN54-205ENST00000578415 KRTAP3-3Q9BYR6 98 aa9.1□□□□□ -0.95
TSEN54-205ENST00000578415 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
TSEN54-205ENST00000578415 SPRR2FQ96RM1 72 aa9□□□□□ -0.97
TSEN54-205ENST00000578415 SCGB1A1P11684 91 aa8.99□□□□□ -0.97
TSEN54-205ENST00000578415 SPRR2EP22531 72 aa8.99□□□□□ -0.97
TSEN54-205ENST00000578415 SPRR2BP35325 72 aa8.99□□□□□ -0.97
TSEN54-205ENST00000578415 SPRR2AP35326 72 aa8.99□□□□□ -0.97
TSEN54-205ENST00000578415 TP53AIP1Q9HCN2 124 aa8.97□□□□□ -0.97
TSEN54-205ENST00000578415 UQCRQO14949 82 aa8.9□□□□□ -0.98
TSEN54-205ENST00000578415 OCR1Q9BZK8 76 aa8.88□□□□□ -0.99
TSEN54-205ENST00000578415 TRAV22A0A0B4J277 110 aa8.84□□□□□ -0.99
TSEN54-205ENST00000578415 MT1XP80297 61 aa8.84□□□□□ -0.99
TSEN54-205ENST00000578415 CYP4F30PQ9H0H9 118 aa8.84□□□□□ -0.99
TSEN54-205ENST00000578415 H0Y9P7 68 aa8.83□□□□□ -1
TSEN54-205ENST00000578415 ATOX1O00244 68 aa8.83□□□□□ -1
TSEN54-205ENST00000578415 LCE1AQ5T7P2 110 aa8.83□□□□□ -1
TSEN54-205ENST00000578415 KRTAP2-2Q9BYT5 123 aa8.83□□□□□ -1
TSEN54-205ENST00000578415 KRTAP2-1Q9BYU5 128 aa8.83□□□□□ -1
TSEN54-205ENST00000578415 SMIM20Q8N5G0 67 aa8.82□□□□□ -1
TSEN54-205ENST00000578415 KRTAP8-1Q8IUC2 63 aa8.81□□□□□ -1
TSEN54-205ENST00000578415 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
TSEN54-205ENST00000578415 H0YAA0 97 aa8.8□□□□□ -1
TSEN54-205ENST00000578415 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
TSEN54-205ENST00000578415 MP68P56378 58 aa8.78□□□□□ -1
TSEN54-205ENST00000578415 LINC00208Q96KT6 92 aa8.75□□□□□ -1.01
TSEN54-205ENST00000578415 LOC101927531A0A1B0GV80 90 aa8.73□□□□□ -1.01
TSEN54-205ENST00000578415 A8MUN3 132 aa8.73□□□□□ -1.01
TSEN54-205ENST00000578415 SERP2Q8N6R1 65 aa8.71□□□□□ -1.02
TSEN54-205ENST00000578415 NDUFC1O43677 76 aa8.7□□□□□ -1.02
TSEN54-205ENST00000578415 KRTAP12-2P59991 146 aa8.7□□□□□ -1.02
TSEN54-205ENST00000578415 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
TSEN54-205ENST00000578415 H3BPC8 53 aa8.68□□□□□ -1.02
TSEN54-205ENST00000578415 SPRR2DP22532 72 aa8.68□□□□□ -1.02
TSEN54-205ENST00000578415 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
TSEN54-205ENST00000578415 ANAPC13Q9BS18 74 aa8.64□□□□□ -1.03
TSEN54-205ENST00000578415 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
TSEN54-205ENST00000578415 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
TSEN54-205ENST00000578415 COX7CP15954 63 aa8.61□□□□□ -1.03
TSEN54-205ENST00000578415 C20orf197Q8N268 126 aa8.6□□□□□ -1.03
TSEN54-205ENST00000578415 SNURFQ9Y675 71 aa8.6□□□□□ -1.03
TSEN54-205ENST00000578415 LCE3BQ5TA77 95 aa8.5□□□□□ -1.05
TSEN54-205ENST00000578415 R4GN34 69 aa8.48□□□□□ -1.05
TSEN54-205ENST00000578415 P0C880 135 aa8.46□□□□□ -1.06
TSEN54-205ENST00000578415 CCDC179H3BU77 68 aa8.45□□□□□ -1.06
TSEN54-205ENST00000578415 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
TSEN54-205ENST00000578415 M0QZ58 72 aa8.41□□□□□ -1.06
TSEN54-205ENST00000578415 KRTAP10-12P60413 245 aa8.38□□□□□ -1.07
TSEN54-205ENST00000578415 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
TSEN54-205ENST00000578415 H7BZZ5 65 aa8.33□□□□□ -1.08
TSEN54-205ENST00000578415 SPANXA2-OT1Q8N9U9 137 aa8.33□□□□□ -1.08
TSEN54-205ENST00000578415 DMAC1Q96GE9 116 aa8.33□□□□□ -1.08
TSEN54-205ENST00000578415 LINC01554Q52M75 96 aa8.32□□□□□ -1.08
TSEN54-205ENST00000578415 KRTAP3-2Q9BYR7 98 aa8.3□□□□□ -1.08
TSEN54-205ENST00000578415 ACYP2P14621 99 aa8.27□□□□□ -1.09
TSEN54-205ENST00000578415 GPR98Q8WXG9 6306 aa8.24□□□□□ -1.09
TSEN54-205ENST00000578415 PCP4P48539 62 aa8.24□□□□□ -1.09
TSEN54-205ENST00000578415 CHKB-CPT1BH3BT56 60 aa8.16□□□□□ -1.1
TSEN54-205ENST00000578415 TMEM258P61165 79 aa8.12□□□□□ -1.11
TSEN54-205ENST00000578415 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
TSEN54-205ENST00000578415 COA5Q86WW8 74 aa8.11□□□□□ -1.11
TSEN54-205ENST00000578415 DSTQ03001 7570 aaKnown RBP8.1□□□□□ -1.11
TSEN54-205ENST00000578415 SPTSSBQ8NFR3 76 aa8.06□□□□□ -1.12
TSEN54-205ENST00000578415 KRTAP4-9Q9BYQ8 210 aa8.05□□□□□ -1.12
TSEN54-205ENST00000578415 LCE5AQ5TCM9 118 aa7.99□□□□□ -1.13
TSEN54-205ENST00000578415 KRTAP19-7Q3SYF9 63 aa7.92□□□□□ -1.14
TSEN54-205ENST00000578415 SERP1Q9Y6X1 66 aa7.89□□□□□ -1.15
TSEN54-205ENST00000578415 KRTAP19-3Q7Z4W3 81 aa7.88□□□□□ -1.15
TSEN54-205ENST00000578415 MT1EP04732 61 aa7.86□□□□□ -1.15
TSEN54-205ENST00000578415 LCE1DQ5T752 114 aa7.81□□□□□ -1.16
TSEN54-205ENST00000578415 SEC61GP60059 68 aa7.77□□□□□ -1.17
TSEN54-205ENST00000578415 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
TSEN54-205ENST00000578415 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
TSEN54-205ENST00000578415 A0A1B0GU69 56 aa7.69□□□□□ -1.18
TSEN54-205ENST00000578415 HMCN1Q96RW7 5635 aa7.68□□□□□ -1.18
TSEN54-205ENST00000578415 RPS28P62857 69 aaKnown RBP7.67□□□□□ -1.18
TSEN54-205ENST00000578415 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
TSEN54-205ENST00000578415 MT4P47944 62 aa7.65□□□□□ -1.18
TSEN54-205ENST00000578415 LCE4AQ5TA78 99 aa7.65□□□□□ -1.18
TSEN54-205ENST00000578415 SMIM26A0A096LP01 95 aa7.63□□□□□ -1.19
TSEN54-205ENST00000578415 PRR15LQ9BU68 103 aa7.63□□□□□ -1.19
TSEN54-205ENST00000578415 MT1GP13640 62 aa7.62□□□□□ -1.19
TSEN54-205ENST00000578415 V9GYY9 64 aa7.58□□□□□ -1.2
TSEN54-205ENST00000578415 AHNAK2Q8IVF2 5795 aa7.57□□□□□ -1.2
TSEN54-205ENST00000578415 KRTAP19-5Q3LI72 72 aa7.57□□□□□ -1.2
TSEN54-205ENST00000578415 A0A1B0GU33 70 aa7.56□□□□□ -1.2
TSEN54-205ENST00000578415 Q1T7F1 81 aa7.54□□□□□ -1.2
TSEN54-205ENST00000578415 PP632Q6XCG6 107 aa7.54□□□□□ -1.2
TSEN54-205ENST00000578415 A0A0D9SG42 100 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms