RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 LPAP08519 4548 aa14.13□□□□□ -0.15
LIMD2-203ENST00000578067 SEC61BP60468 96 aaKnown RBP14.04□□□□□ -0.16
LIMD2-203ENST00000578067 SEC61GP60059 68 aa14□□□□□ -0.17
LIMD2-203ENST00000578067 LCA10Q71F78 164 aa13.99□□□□□ -0.17
LIMD2-203ENST00000578067 A8MU10 97 aa13.97□□□□□ -0.17
LIMD2-203ENST00000578067 CDC42SE1Q9NRR8 79 aa13.96□□□□□ -0.17
LIMD2-203ENST00000578067 RBM12B-AS1Q9P1G2 102 aa13.95□□□□□ -0.18
LIMD2-203ENST00000578067 H1FX-AS1Q4G0G2 97 aa13.94□□□□□ -0.18
LIMD2-203ENST00000578067 S4R3F8 94 aa13.93□□□□□ -0.18
LIMD2-203ENST00000578067 KRTAP3-3Q9BYR6 98 aa13.92□□□□□ -0.18
LIMD2-203ENST00000578067 PMAIP1Q13794 54 aa13.87□□□□□ -0.19
LIMD2-203ENST00000578067 UQCR11O14957 56 aa13.85□□□□□ -0.19
LIMD2-203ENST00000578067 PCLOQ9Y6V0 5065 aa13.76□□□□□ -0.21
LIMD2-203ENST00000578067 SPATA8Q6RVD6 105 aa13.76□□□□□ -0.21
LIMD2-203ENST00000578067 MIR22HGQ0VDD5 57 aa13.74□□□□□ -0.21
LIMD2-203ENST00000578067 KRTAP4-1Q9BYQ7 146 aa13.74□□□□□ -0.21
LIMD2-203ENST00000578067 A0A1B0GU33 70 aa13.66□□□□□ -0.22
LIMD2-203ENST00000578067 MUC17Q685J3 4493 aa13.62□□□□□ -0.23
LIMD2-203ENST00000578067 CSAG1Q6PB30 78 aa13.57□□□□□ -0.24
LIMD2-203ENST00000578067 KRTAP10-6P60371 365 aaPredicted RBP13.55□□□□□ -0.24
LIMD2-203ENST00000578067 HERC1Q15751 4861 aa13.54□□□□□ -0.24
LIMD2-203ENST00000578067 KRTAP3-2Q9BYR7 98 aa13.53□□□□□ -0.24
LIMD2-203ENST00000578067 H0YAA0 97 aa13.51□□□□□ -0.25
LIMD2-203ENST00000578067 HMCN2Q8NDA2 5059 aa13.48□□□□□ -0.25
LIMD2-203ENST00000578067 KTN1-AS1Q86SY8 53 aa13.47□□□□□ -0.25
LIMD2-203ENST00000578067 KRTAP19-2Q3LHN2 52 aa13.43□□□□□ -0.26
LIMD2-203ENST00000578067 A6NN06 94 aa13.4□□□□□ -0.26
LIMD2-203ENST00000578067 ADM2Q7Z4H4 148 aa13.39□□□□□ -0.27
LIMD2-203ENST00000578067 P0C880 135 aa13.38□□□□□ -0.27
LIMD2-203ENST00000578067 KRTAP13-4Q3LI77 160 aa13.24□□□□□ -0.29
LIMD2-203ENST00000578067 MUC2Q02817 5179 aa13.14□□□□□ -0.31
LIMD2-203ENST00000578067 A0A0D9SG42 100 aa13.05□□□□□ -0.32
LIMD2-203ENST00000578067 M0QZ58 72 aa13.04□□□□□ -0.32
LIMD2-203ENST00000578067 K7ERS5 55 aa13.02□□□□□ -0.33
LIMD2-203ENST00000578067 FLGP20930 4061 aaPredicted RBP12.97□□□□□ -0.33
LIMD2-203ENST00000578067 LCE2CQ5TA81 110 aa12.95□□□□□ -0.34
LIMD2-203ENST00000578067 R4GN34 69 aa12.87□□□□□ -0.35
LIMD2-203ENST00000578067 LORP23490 312 aaPredicted RBP12.83□□□□□ -0.36
LIMD2-203ENST00000578067 UBR4Q5T4S7 5183 aa12.8□□□□□ -0.36
LIMD2-203ENST00000578067 RNF213Q63HN8 5207 aa12.8□□□□□ -0.36
LIMD2-203ENST00000578067 KRTAP12-1P59990 96 aa12.76□□□□□ -0.37
LIMD2-203ENST00000578067 KRTAP12-2P59991 146 aa12.76□□□□□ -0.37
LIMD2-203ENST00000578067 SPINT4Q6UDR6 99 aa12.71□□□□□ -0.37
LIMD2-203ENST00000578067 LINC01554Q52M75 96 aa12.69□□□□□ -0.38
LIMD2-203ENST00000578067 PRAC1Q96KF2 57 aa12.67□□□□□ -0.38
LIMD2-203ENST00000578067 MT1HP80294 61 aa12.66□□□□□ -0.38
LIMD2-203ENST00000578067 M0R2T5 61 aa12.61□□□□□ -0.39
LIMD2-203ENST00000578067 FAT4Q6V0I7 4981 aa12.58□□□□□ -0.4
LIMD2-203ENST00000578067 ROMO1P60602 79 aa12.57□□□□□ -0.4
LIMD2-203ENST00000578067 CRIPTQ9P021 101 aa12.56□□□□□ -0.4
LIMD2-203ENST00000578067 MT2AP02795 61 aa12.27□□□□□ -0.45
LIMD2-203ENST00000578067 KRTAP9-8Q9BYQ0 159 aa12.26□□□□□ -0.45
LIMD2-203ENST00000578067 KRTAP25-1Q3LHN0 102 aa12.25□□□□□ -0.45
LIMD2-203ENST00000578067 SPRR2GQ9BYE4 73 aa12.21□□□□□ -0.45
LIMD2-203ENST00000578067 MT1FP04733 61 aa12.21□□□□□ -0.46
LIMD2-203ENST00000578067 KRTAP10-10P60014 251 aa12.2□□□□□ -0.46
LIMD2-203ENST00000578067 KRTAP19-1Q8IUB9 90 aa12.16□□□□□ -0.46
LIMD2-203ENST00000578067 CAMK2N1Q7Z7J9 78 aa12.11□□□□□ -0.47
LIMD2-203ENST00000578067 C10orf95Q9H7T3 257 aa12.06□□□□□ -0.48
LIMD2-203ENST00000578067 PLAC4Q8WY50 150 aa11.93□□□□□ -0.5
LIMD2-203ENST00000578067 LCE2AQ5TA79 106 aaPredicted RBP11.84□□□□□ -0.51
LIMD2-203ENST00000578067 KRTAP19-8Q3LI54 63 aa11.83□□□□□ -0.52
LIMD2-203ENST00000578067 H3BS24 57 aa11.82□□□□□ -0.52
LIMD2-203ENST00000578067 KRTAP9-3Q9BYQ3 159 aa11.79□□□□□ -0.52
LIMD2-203ENST00000578067 MT1BP07438 61 aa11.65□□□□□ -0.54
LIMD2-203ENST00000578067 TNP1P09430 55 aa11.59□□□□□ -0.55
LIMD2-203ENST00000578067 PP632Q6XCG6 107 aa11.47□□□□□ -0.57
LIMD2-203ENST00000578067 LCE2BO14633 110 aa11.4□□□□□ -0.58
LIMD2-203ENST00000578067 KRTAP10-5P60370 271 aa11.37□□□□□ -0.59
LIMD2-203ENST00000578067 MT1XP80297 61 aa11.37□□□□□ -0.59
LIMD2-203ENST00000578067 KRTAP23-1A1A580 65 aa11.33□□□□□ -0.6
LIMD2-203ENST00000578067 PRO2289Q9P1D8 64 aa11.18□□□□□ -0.62
LIMD2-203ENST00000578067 KRTAP15-1Q3LI76 137 aa11.04□□□□□ -0.64
LIMD2-203ENST00000578067 LCE3AQ5TA76 89 aa11.04□□□□□ -0.64
LIMD2-203ENST00000578067 KRTAP10-7P60409 375 aaPredicted RBP10.96□□□□□ -0.66
LIMD2-203ENST00000578067 USH2AO75445 5202 aa10.93□□□□□ -0.66
LIMD2-203ENST00000578067 KRTAP10-12P60413 245 aa10.92□□□□□ -0.66
LIMD2-203ENST00000578067 KRTAP8-1Q8IUC2 63 aa10.81□□□□□ -0.68
LIMD2-203ENST00000578067 NDUFAF8A1L188 74 aa10.8□□□□□ -0.68
LIMD2-203ENST00000578067 KRTAP12-3P60328 96 aa10.58□□□□□ -0.72
LIMD2-203ENST00000578067 LCE2DQ5TA82 110 aaPredicted RBP10.58□□□□□ -0.72
LIMD2-203ENST00000578067 KRTAP19-6Q3LI70 58 aa10.57□□□□□ -0.72
LIMD2-203ENST00000578067 SSPOA2VEC9 5147 aa10.56□□□□□ -0.72
LIMD2-203ENST00000578067 KRTAP4-8A0A0G2JLE6 195 aa10.43□□□□□ -0.74
LIMD2-203ENST00000578067 KRTAP4-8Q9BYQ9 185 aa10.43□□□□□ -0.74
LIMD2-203ENST00000578067 KRTAP19-5Q3LI72 72 aa10.38□□□□□ -0.75
LIMD2-203ENST00000578067 SPRR5A0A1B0GTR4 108 aa10.34□□□□□ -0.75
LIMD2-203ENST00000578067 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
LIMD2-203ENST00000578067 KMT2DO14686 5537 aa10.25□□□□□ -0.77
LIMD2-203ENST00000578067 LUZP6Q538Z0 58 aa10.2□□□□□ -0.78
LIMD2-203ENST00000578067 KRTAP19-7Q3SYF9 63 aa10.14□□□□□ -0.79
LIMD2-203ENST00000578067 FCGBPQ9Y6R7 5405 aaPredicted RBP9.99□□□□□ -0.81
LIMD2-203ENST00000578067 KRTAP9-2Q9BYQ4 174 aa9.94□□□□□ -0.82
LIMD2-203ENST00000578067 MT1EP04732 61 aa9.92□□□□□ -0.82
LIMD2-203ENST00000578067 LCE3CQ5T5A8 94 aa9.92□□□□□ -0.82
LIMD2-203ENST00000578067 MT1LQ93083 61 aa9.8□□□□□ -0.84
LIMD2-203ENST00000578067 KRTAP19-4Q3LI73 84 aa9.78□□□□□ -0.84
LIMD2-203ENST00000578067 A0A0A0MQY5 61 aa9.77□□□□□ -0.85
LIMD2-203ENST00000578067 CRCT1Q9UGL9 99 aa9.66□□□□□ -0.86
LIMD2-203ENST00000578067 KRTAP4-7Q9BYR0 210 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms