RNA–Protein interactions for RNA: ENST00000572980.5

TVP23A-206, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-206ENST00000572980 KRTAP3-3Q9BYR6 98 aa11.07□□□□□ -0.64
TVP23A-206ENST00000572980 NDUFC1O43677 76 aa11.06□□□□□ -0.64
TVP23A-206ENST00000572980 SPANXA2-OT1Q8N9U9 137 aa11.04□□□□□ -0.64
TVP23A-206ENST00000572980 ACYP2P14621 99 aa11.02□□□□□ -0.65
TVP23A-206ENST00000572980 KRTAP10-10P60014 251 aa10.99□□□□□ -0.65
TVP23A-206ENST00000572980 MT1FP04733 61 aa10.98□□□□□ -0.65
TVP23A-206ENST00000572980 LCE2DQ5TA82 110 aaPredicted RBP10.97□□□□□ -0.65
TVP23A-206ENST00000572980 KRTAP9-2Q9BYQ4 174 aa10.92□□□□□ -0.66
TVP23A-206ENST00000572980 H7BZZ5 65 aa10.9□□□□□ -0.67
TVP23A-206ENST00000572980 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
TVP23A-206ENST00000572980 CCDC179H3BU77 68 aa10.86□□□□□ -0.67
TVP23A-206ENST00000572980 CHKB-CPT1BH3BT56 60 aa10.82□□□□□ -0.68
TVP23A-206ENST00000572980 KRTAP9-3Q9BYQ3 159 aa10.79□□□□□ -0.68
TVP23A-206ENST00000572980 SPTSSBQ8NFR3 76 aa10.78□□□□□ -0.68
TVP23A-206ENST00000572980 H0YAA0 97 aa10.77□□□□□ -0.68
TVP23A-206ENST00000572980 COA5Q86WW8 74 aa10.68□□□□□ -0.7
TVP23A-206ENST00000572980 ADM2Q7Z4H4 148 aa10.67□□□□□ -0.7
TVP23A-206ENST00000572980 LCE2BO14633 110 aa10.6□□□□□ -0.71
TVP23A-206ENST00000572980 CRIPTQ9P021 101 aa10.6□□□□□ -0.71
TVP23A-206ENST00000572980 ATP5EP56381 51 aaPredicted RBP10.59□□□□□ -0.71
TVP23A-206ENST00000572980 TMEM258P61165 79 aa10.52□□□□□ -0.72
TVP23A-206ENST00000572980 KRTAP19-1Q8IUB9 90 aa10.52□□□□□ -0.73
TVP23A-206ENST00000572980 SPRR2GQ9BYE4 73 aa10.51□□□□□ -0.73
TVP23A-206ENST00000572980 P0C880 135 aa10.48□□□□□ -0.73
TVP23A-206ENST00000572980 KRTAP3-2Q9BYR7 98 aa10.48□□□□□ -0.73
TVP23A-206ENST00000572980 FSIP2Q5CZC0 6907 aa10.47□□□□□ -0.73
TVP23A-206ENST00000572980 CRCT1Q9UGL9 99 aa10.43□□□□□ -0.74
TVP23A-206ENST00000572980 USH2AO75445 5202 aa10.39□□□□□ -0.75
TVP23A-206ENST00000572980 R4GN34 69 aa10.38□□□□□ -0.75
TVP23A-206ENST00000572980 KRTAP9-6A0A140TA67 174 aa10.35□□□□□ -0.75
TVP23A-206ENST00000572980 PCP4P48539 62 aa10.34□□□□□ -0.75
TVP23A-206ENST00000572980 SEC61GP60059 68 aa10.33□□□□□ -0.76
TVP23A-206ENST00000572980 KRTAP19-8Q3LI54 63 aa10.33□□□□□ -0.76
TVP23A-206ENST00000572980 M0QZ58 72 aa10.31□□□□□ -0.76
TVP23A-206ENST00000572980 Q5VV11 94 aa10.31□□□□□ -0.76
TVP23A-206ENST00000572980 SERP1Q9Y6X1 66 aa10.28□□□□□ -0.76
TVP23A-206ENST00000572980 MT1BP07438 61 aa10.23□□□□□ -0.77
TVP23A-206ENST00000572980 SSPOA2VEC9 5147 aa10.17□□□□□ -0.78
TVP23A-206ENST00000572980 A0A1B0GU69 56 aa10.15□□□□□ -0.78
TVP23A-206ENST00000572980 KRTAP19-6Q3LI70 58 aa10.15□□□□□ -0.78
TVP23A-206ENST00000572980 LINC01554Q52M75 96 aa10.13□□□□□ -0.79
TVP23A-206ENST00000572980 A0A1B0GU33 70 aa10.06□□□□□ -0.8
TVP23A-206ENST00000572980 PLAC4Q8WY50 150 aa10.05□□□□□ -0.8
TVP23A-206ENST00000572980 PRR15LQ9BU68 103 aa10.04□□□□□ -0.8
TVP23A-206ENST00000572980 LINC01558Q9Y6Z2 57 aa10.04□□□□□ -0.8
TVP23A-206ENST00000572980 KRTAP13-4Q3LI77 160 aa10.02□□□□□ -0.81
TVP23A-206ENST00000572980 A6NN06 94 aa9.93□□□□□ -0.82
TVP23A-206ENST00000572980 SPATA8Q6RVD6 105 aa9.92□□□□□ -0.82
TVP23A-206ENST00000572980 FCGBPQ9Y6R7 5405 aaPredicted RBP9.9□□□□□ -0.83
TVP23A-206ENST00000572980 KRTAP10-5P60370 271 aa9.89□□□□□ -0.83
TVP23A-206ENST00000572980 V9GYY9 64 aa9.87□□□□□ -0.83
TVP23A-206ENST00000572980 RPS28P62857 69 aaKnown RBP9.85□□□□□ -0.83
TVP23A-206ENST00000572980 SMIM26A0A096LP01 95 aa9.84□□□□□ -0.83
TVP23A-206ENST00000572980 A0A0D9SG42 100 aa9.82□□□□□ -0.84
TVP23A-206ENST00000572980 PRO2289Q9P1D8 64 aa9.81□□□□□ -0.84
TVP23A-206ENST00000572980 Q1T7F1 81 aa9.8□□□□□ -0.84
TVP23A-206ENST00000572980 MT1XP80297 61 aa9.74□□□□□ -0.85
TVP23A-206ENST00000572980 UQCR11O14957 56 aa9.71□□□□□ -0.85
TVP23A-206ENST00000572980 PSPHP1O15172 72 aa9.68□□□□□ -0.86
TVP23A-206ENST00000572980 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.67□□□□□ -0.86
TVP23A-206ENST00000572980 SPINT4Q6UDR6 99 aa9.66□□□□□ -0.86
TVP23A-206ENST00000572980 A8MU10 97 aa9.65□□□□□ -0.86
TVP23A-206ENST00000572980 CAMK2N1Q7Z7J9 78 aa9.65□□□□□ -0.86
TVP23A-206ENST00000572980 KRTAP12-1P59990 96 aa9.63□□□□□ -0.87
TVP23A-206ENST00000572980 KRTAP12-2P59991 146 aa9.55□□□□□ -0.88
TVP23A-206ENST00000572980 MIR22HGQ0VDD5 57 aa9.54□□□□□ -0.88
TVP23A-206ENST00000572980 MACF1Q9UPN3 7388 aaKnown RBP9.49□□□□□ -0.89
TVP23A-206ENST00000572980 A6NED7 52 aa9.41□□□□□ -0.9
TVP23A-206ENST00000572980 KRTAP9-7A8MTY7 169 aa9.39□□□□□ -0.91
TVP23A-206ENST00000572980 KRTAP10-7P60409 375 aaPredicted RBP9.31□□□□□ -0.92
TVP23A-206ENST00000572980 SYNE2Q8WXH0 6885 aaKnown RBP9.28□□□□□ -0.92
TVP23A-206ENST00000572980 K7ERS5 55 aa9.28□□□□□ -0.92
TVP23A-206ENST00000572980 KRTAP10-12P60413 245 aa9.27□□□□□ -0.93
TVP23A-206ENST00000572980 KRTAP6-3Q3LI67 103 aa9.25□□□□□ -0.93
TVP23A-206ENST00000572980 C10orf95Q9H7T3 257 aa9.14□□□□□ -0.95
TVP23A-206ENST00000572980 KRTAP4-8A0A0G2JLE6 195 aa9.13□□□□□ -0.95
TVP23A-206ENST00000572980 KRTAP8-1Q8IUC2 63 aa9.13□□□□□ -0.95
TVP23A-206ENST00000572980 KRTAP4-8Q9BYQ9 185 aa9.13□□□□□ -0.95
TVP23A-206ENST00000572980 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
TVP23A-206ENST00000572980 KMT2DO14686 5537 aa9.11□□□□□ -0.95
TVP23A-206ENST00000572980 KRTAP5-9P26371 169 aa9.07□□□□□ -0.96
TVP23A-206ENST00000572980 TNP1P09430 55 aa9.04□□□□□ -0.96
TVP23A-206ENST00000572980 SPRR2FQ96RM1 72 aa8.96□□□□□ -0.97
TVP23A-206ENST00000572980 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
TVP23A-206ENST00000572980 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
TVP23A-206ENST00000572980 BRK1Q8WUW1 75 aa8.76□□□□□ -1.01
TVP23A-206ENST00000572980 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
TVP23A-206ENST00000572980 ROMO1P60602 79 aa8.73□□□□□ -1.01
TVP23A-206ENST00000572980 KRTAP19-7Q3SYF9 63 aa8.69□□□□□ -1.02
TVP23A-206ENST00000572980 SPRR2EP22531 72 aa8.69□□□□□ -1.02
TVP23A-206ENST00000572980 SPRR2BP35325 72 aa8.69□□□□□ -1.02
TVP23A-206ENST00000572980 SPRR2AP35326 72 aa8.69□□□□□ -1.02
TVP23A-206ENST00000572980 KRTAP19-5Q3LI72 72 aa8.65□□□□□ -1.03
TVP23A-206ENST00000572980 LCE1AQ5T7P2 110 aa8.64□□□□□ -1.03
TVP23A-206ENST00000572980 MDN1Q9NU22 5596 aa8.63□□□□□ -1.03
TVP23A-206ENST00000572980 NEBP20929 6669 aa8.6□□□□□ -1.03
TVP23A-206ENST00000572980 MT1EP04732 61 aa8.59□□□□□ -1.03
TVP23A-206ENST00000572980 KRTAP23-1A1A580 65 aa8.53□□□□□ -1.04
TVP23A-206ENST00000572980 KRTAP12-3P60328 96 aa8.44□□□□□ -1.06
TVP23A-206ENST00000572980 KRTAP19-3Q7Z4W3 81 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms