RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 A0A1B0GW54 56 aa4.56□□□□□ -1.68
CTDNEP1-202ENST00000570380 IMUPQ9GZP8 106 aa4.56□□□□□ -1.68
CTDNEP1-202ENST00000570380 IGKV3D-7A0A0C4DH55 119 aa4.55□□□□□ -1.68
CTDNEP1-202ENST00000570380 J3KT08 172 aa4.52□□□□□ -1.69
CTDNEP1-202ENST00000570380 C5orf47Q569G3 176 aa4.52□□□□□ -1.69
CTDNEP1-202ENST00000570380 MT-ATP8P03928 68 aa4.5□□□□□ -1.69
CTDNEP1-202ENST00000570380 NREPQ16612 68 aa4.5□□□□□ -1.69
CTDNEP1-202ENST00000570380 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
CTDNEP1-202ENST00000570380 KRTAP4-7Q9BYR0 210 aa4.5□□□□□ -1.69
CTDNEP1-202ENST00000570380 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
CTDNEP1-202ENST00000570380 HIST1H4AP62805 103 aaKnown RBP4.48□□□□□ -1.69
CTDNEP1-202ENST00000570380 CXCL6P80162 114 aa4.48□□□□□ -1.69
CTDNEP1-202ENST00000570380 NDUFB1O75438 58 aa4.47□□□□□ -1.69
CTDNEP1-202ENST00000570380 Q6ZVQ6 151 aa4.47□□□□□ -1.69
CTDNEP1-202ENST00000570380 ANAPC13Q9BS18 74 aa4.47□□□□□ -1.69
CTDNEP1-202ENST00000570380 K7EQZ3 153 aa4.46□□□□□ -1.7
CTDNEP1-202ENST00000570380 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
CTDNEP1-202ENST00000570380 PRR15Q8IV56 129 aa4.46□□□□□ -1.7
CTDNEP1-202ENST00000570380 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
CTDNEP1-202ENST00000570380 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
CTDNEP1-202ENST00000570380 ATOX1O00244 68 aa4.45□□□□□ -1.7
CTDNEP1-202ENST00000570380 BPY2O14599 106 aa4.45□□□□□ -1.7
CTDNEP1-202ENST00000570380 Q8N9L7 120 aa4.44□□□□□ -1.7
CTDNEP1-202ENST00000570380 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
CTDNEP1-202ENST00000570380 IGKV2-30P06310 120 aa4.43□□□□□ -1.7
CTDNEP1-202ENST00000570380 SMIM20Q8N5G0 67 aa4.43□□□□□ -1.7
CTDNEP1-202ENST00000570380 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
CTDNEP1-202ENST00000570380 C4orf26Q17RF5 130 aa4.42□□□□□ -1.7
CTDNEP1-202ENST00000570380 CSAG1Q6PB30 78 aa4.42□□□□□ -1.7
CTDNEP1-202ENST00000570380 LCE1DQ5T752 114 aa4.41□□□□□ -1.7
CTDNEP1-202ENST00000570380 TMEM254Q8TBM7 123 aa4.41□□□□□ -1.7
CTDNEP1-202ENST00000570380 SEC61GP60059 68 aa4.4□□□□□ -1.71
CTDNEP1-202ENST00000570380 MRPL34Q9BQ48 92 aaKnown RBP4.4□□□□□ -1.71
CTDNEP1-202ENST00000570380 hDV103S1A0JD37 113 aa4.39□□□□□ -1.71
CTDNEP1-202ENST00000570380 C7orf65Q6ZTY9 151 aa4.39□□□□□ -1.71
CTDNEP1-202ENST00000570380 MT1XP80297 61 aa4.38□□□□□ -1.71
CTDNEP1-202ENST00000570380 S4R3F8 94 aa4.38□□□□□ -1.71
CTDNEP1-202ENST00000570380 Q5W150 140 aa4.37□□□□□ -1.71
CTDNEP1-202ENST00000570380 LCA10Q71F78 164 aa4.37□□□□□ -1.71
CTDNEP1-202ENST00000570380 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
CTDNEP1-202ENST00000570380 NDUFS5O43920 106 aa4.36□□□□□ -1.71
CTDNEP1-202ENST00000570380 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
CTDNEP1-202ENST00000570380 A0A087WVE0 104 aa4.35□□□□□ -1.71
CTDNEP1-202ENST00000570380 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
CTDNEP1-202ENST00000570380 KRTAP4-9Q9BYQ8 210 aa4.35□□□□□ -1.71
CTDNEP1-202ENST00000570380 UQCRQO14949 82 aa4.34□□□□□ -1.71
CTDNEP1-202ENST00000570380 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
CTDNEP1-202ENST00000570380 CRIPTQ9P021 101 aa4.34□□□□□ -1.71
CTDNEP1-202ENST00000570380 HCG22E2RYF7 251 aa4.33□□□□□ -1.72
CTDNEP1-202ENST00000570380 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
CTDNEP1-202ENST00000570380 COX7CP15954 63 aa4.32□□□□□ -1.72
CTDNEP1-202ENST00000570380 TRAV7A0A075B6U4 112 aa4.31□□□□□ -1.72
CTDNEP1-202ENST00000570380 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
CTDNEP1-202ENST00000570380 MP68P56378 58 aa4.27□□□□□ -1.73
CTDNEP1-202ENST00000570380 NDUFC1O43677 76 aa4.26□□□□□ -1.73
CTDNEP1-202ENST00000570380 C1orf64Q8NEQ6 169 aa4.26□□□□□ -1.73
CTDNEP1-202ENST00000570380 TP53AIP1Q9HCN2 124 aa4.25□□□□□ -1.73
CTDNEP1-202ENST00000570380 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
CTDNEP1-202ENST00000570380 C20orf197Q8N268 126 aa4.23□□□□□ -1.73
CTDNEP1-202ENST00000570380 H3BPC8 53 aa4.22□□□□□ -1.73
CTDNEP1-202ENST00000570380 ATP5EP56381 51 aaPredicted RBP4.22□□□□□ -1.73
CTDNEP1-202ENST00000570380 TMEM258P61165 79 aa4.22□□□□□ -1.73
CTDNEP1-202ENST00000570380 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
CTDNEP1-202ENST00000570380 TRAV22A0A0B4J277 110 aa4.2□□□□□ -1.74
CTDNEP1-202ENST00000570380 PLAC4Q8WY50 150 aa4.19□□□□□ -1.74
CTDNEP1-202ENST00000570380 H0Y9P7 68 aa4.18□□□□□ -1.74
CTDNEP1-202ENST00000570380 A8MUN3 132 aa4.17□□□□□ -1.74
CTDNEP1-202ENST00000570380 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
CTDNEP1-202ENST00000570380 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
CTDNEP1-202ENST00000570380 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
CTDNEP1-202ENST00000570380 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
CTDNEP1-202ENST00000570380 CYP4F30PQ9H0H9 118 aa4.14□□□□□ -1.75
CTDNEP1-202ENST00000570380 AHNAK2Q8IVF2 5795 aa4.14□□□□□ -1.75
CTDNEP1-202ENST00000570380 LINC00208Q96KT6 92 aa4.13□□□□□ -1.75
CTDNEP1-202ENST00000570380 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
CTDNEP1-202ENST00000570380 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
CTDNEP1-202ENST00000570380 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CTDNEP1-202ENST00000570380 H0YAA0 97 aa4.11□□□□□ -1.75
CTDNEP1-202ENST00000570380 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CTDNEP1-202ENST00000570380 H7BZZ5 65 aa4.1□□□□□ -1.75
CTDNEP1-202ENST00000570380 KRTAP5-3Q6L8H2 238 aa4.07□□□□□ -1.76
CTDNEP1-202ENST00000570380 ADM2Q7Z4H4 148 aa4.07□□□□□ -1.76
CTDNEP1-202ENST00000570380 SPANXA2-OT1Q8N9U9 137 aa4.07□□□□□ -1.76
CTDNEP1-202ENST00000570380 SERP1Q9Y6X1 66 aa4.07□□□□□ -1.76
CTDNEP1-202ENST00000570380 MT4P47944 62 aa4.06□□□□□ -1.76
CTDNEP1-202ENST00000570380 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CTDNEP1-202ENST00000570380 V9GYY9 64 aa4.05□□□□□ -1.76
CTDNEP1-202ENST00000570380 CYSTM1Q9H1C7 97 aa4.04□□□□□ -1.76
CTDNEP1-202ENST00000570380 RPS28P62857 69 aaKnown RBP4.03□□□□□ -1.76
CTDNEP1-202ENST00000570380 KRTAP5-7Q6L8G8 165 aa4.02□□□□□ -1.77
CTDNEP1-202ENST00000570380 LCE4AQ5TA78 99 aa4.01□□□□□ -1.77
CTDNEP1-202ENST00000570380 R4GN34 69 aa3.99□□□□□ -1.77
CTDNEP1-202ENST00000570380 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
CTDNEP1-202ENST00000570380 SMIM26A0A096LP01 95 aa3.97□□□□□ -1.77
CTDNEP1-202ENST00000570380 ACYP2P14621 99 aa3.97□□□□□ -1.77
CTDNEP1-202ENST00000570380 KRTAP19-3Q7Z4W3 81 aa3.96□□□□□ -1.78
CTDNEP1-202ENST00000570380 M0QZ58 72 aa3.94□□□□□ -1.78
CTDNEP1-202ENST00000570380 SPTSSBQ8NFR3 76 aa3.94□□□□□ -1.78
CTDNEP1-202ENST00000570380 P0C880 135 aa3.93□□□□□ -1.78
CTDNEP1-202ENST00000570380 KRTAP19-7Q3SYF9 63 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms