RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 FP248Q71RG6 208 aaPredicted RBP3.86□□□□□ -1.79
CNOT1-222ENST00000570139 hDV103S1A0JD37 113 aa3.85□□□□□ -1.79
CNOT1-222ENST00000570139 TMEM254Q8TBM7 123 aa3.85□□□□□ -1.79
CNOT1-222ENST00000570139 TP53AIP1Q9HCN2 124 aa3.85□□□□□ -1.79
CNOT1-222ENST00000570139 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
CNOT1-222ENST00000570139 TRAV7A0A075B6U4 112 aa3.84□□□□□ -1.79
CNOT1-222ENST00000570139 SERP2Q8N6R1 65 aa3.84□□□□□ -1.79
CNOT1-222ENST00000570139 ABCA13Q86UQ4 5058 aa3.83□□□□□ -1.8
CNOT1-222ENST00000570139 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
CNOT1-222ENST00000570139 TNXBP22105 4242 aa3.82□□□□□ -1.8
CNOT1-222ENST00000570139 UQCRQO14949 82 aa3.82□□□□□ -1.8
CNOT1-222ENST00000570139 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
CNOT1-222ENST00000570139 COX7CP15954 63 aa3.82□□□□□ -1.8
CNOT1-222ENST00000570139 WFDC13Q8IUB5 93 aa3.82□□□□□ -1.8
CNOT1-222ENST00000570139 HERC1Q15751 4861 aa3.81□□□□□ -1.8
CNOT1-222ENST00000570139 H3BPC8 53 aa3.8□□□□□ -1.8
CNOT1-222ENST00000570139 C1orf64Q8NEQ6 169 aa3.8□□□□□ -1.8
CNOT1-222ENST00000570139 TRAV22A0A0B4J277 110 aa3.78□□□□□ -1.8
CNOT1-222ENST00000570139 MYCBP2O75592 4640 aa3.78□□□□□ -1.8
CNOT1-222ENST00000570139 LRP1Q07954 4544 aaKnown RBP3.78□□□□□ -1.81
CNOT1-222ENST00000570139 A0A1B0GU33 70 aa3.77□□□□□ -1.81
CNOT1-222ENST00000570139 NDUFC1O43677 76 aa3.76□□□□□ -1.81
CNOT1-222ENST00000570139 KLKP1Q107X0 134 aa3.76□□□□□ -1.81
CNOT1-222ENST00000570139 FLG2Q5D862 2391 aaPredicted RBP3.76□□□□□ -1.81
CNOT1-222ENST00000570139 A8MUN3 132 aa3.75□□□□□ -1.81
CNOT1-222ENST00000570139 KRTAP25-1Q3LHN0 102 aa3.75□□□□□ -1.81
CNOT1-222ENST00000570139 C20orf166-AS1Q96NR2 134 aa3.75□□□□□ -1.81
CNOT1-222ENST00000570139 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
CNOT1-222ENST00000570139 R4GN34 69 aa3.75□□□□□ -1.81
CNOT1-222ENST00000570139 H0Y9P7 68 aa3.74□□□□□ -1.81
CNOT1-222ENST00000570139 TPRXLQ17RH7 258 aa3.74□□□□□ -1.81
CNOT1-222ENST00000570139 FAM236DA0A1B0GTK5 79 aa3.73□□□□□ -1.81
CNOT1-222ENST00000570139 LOC101927531A0A1B0GV80 90 aa3.73□□□□□ -1.81
CNOT1-222ENST00000570139 FAM236CP0DP71 79 aa3.73□□□□□ -1.81
CNOT1-222ENST00000570139 C20orf197Q8N268 126 aa3.73□□□□□ -1.81
CNOT1-222ENST00000570139 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
CNOT1-222ENST00000570139 KRTAP13-3Q3SY46 172 aa3.72□□□□□ -1.81
CNOT1-222ENST00000570139 C9orf92A6NGG3 77 aa3.71□□□□□ -1.82
CNOT1-222ENST00000570139 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
CNOT1-222ENST00000570139 ZCCHC13Q8WW36 166 aaKnown RBP3.7□□□□□ -1.82
CNOT1-222ENST00000570139 LINC00208Q96KT6 92 aa3.7□□□□□ -1.82
CNOT1-222ENST00000570139 DMBT1Q9UGM3 2413 aaPredicted RBP3.7□□□□□ -1.82
CNOT1-222ENST00000570139 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
CNOT1-222ENST00000570139 TMEM258P61165 79 aa3.69□□□□□ -1.82
CNOT1-222ENST00000570139 RPL37P61927 97 aaKnown RBP3.69□□□□□ -1.82
CNOT1-222ENST00000570139 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
CNOT1-222ENST00000570139 SNURFQ9Y675 71 aa3.68□□□□□ -1.82
CNOT1-222ENST00000570139 HRES1P13985 223 aa3.67□□□□□ -1.82
CNOT1-222ENST00000570139 C7orf65Q6ZTY9 151 aa3.67□□□□□ -1.82
CNOT1-222ENST00000570139 H7BZZ5 65 aa3.66□□□□□ -1.82
CNOT1-222ENST00000570139 CYP4F30PQ9H0H9 118 aa3.64□□□□□ -1.83
CNOT1-222ENST00000570139 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
CNOT1-222ENST00000570139 CYSTM1Q9H1C7 97 aa3.62□□□□□ -1.83
CNOT1-222ENST00000570139 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
CNOT1-222ENST00000570139 PCOTHQ58A44 107 aa3.6□□□□□ -1.83
CNOT1-222ENST00000570139 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
CNOT1-222ENST00000570139 SPINK7P58062 85 aa3.59□□□□□ -1.83
CNOT1-222ENST00000570139 SERP1Q9Y6X1 66 aa3.56□□□□□ -1.84
CNOT1-222ENST00000570139 HMCN2Q8NDA2 5059 aa3.55□□□□□ -1.84
CNOT1-222ENST00000570139 ACYP2P14621 99 aa3.55□□□□□ -1.84
CNOT1-222ENST00000570139 RPS28P62857 69 aaKnown RBP3.55□□□□□ -1.84
CNOT1-222ENST00000570139 DMAC1Q96GE9 116 aa3.55□□□□□ -1.84
CNOT1-222ENST00000570139 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
CNOT1-222ENST00000570139 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
CNOT1-222ENST00000570139 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
CNOT1-222ENST00000570139 MUC17Q685J3 4493 aa3.5□□□□□ -1.85
CNOT1-222ENST00000570139 SPRR5A0A1B0GTR4 108 aa3.5□□□□□ -1.85
CNOT1-222ENST00000570139 LPAP08519 4548 aa3.5□□□□□ -1.85
CNOT1-222ENST00000570139 CHKB-CPT1BH3BT56 60 aa3.49□□□□□ -1.85
CNOT1-222ENST00000570139 LCA10Q71F78 164 aa3.49□□□□□ -1.85
CNOT1-222ENST00000570139 COA5Q86WW8 74 aa3.49□□□□□ -1.85
CNOT1-222ENST00000570139 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
CNOT1-222ENST00000570139 LRP2P98164 4655 aa3.49□□□□□ -1.85
CNOT1-222ENST00000570139 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
CNOT1-222ENST00000570139 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
CNOT1-222ENST00000570139 RNF213Q63HN8 5207 aa3.44□□□□□ -1.86
CNOT1-222ENST00000570139 LINC01554Q52M75 96 aa3.44□□□□□ -1.86
CNOT1-222ENST00000570139 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
CNOT1-222ENST00000570139 P0C880 135 aa3.42□□□□□ -1.86
CNOT1-222ENST00000570139 S4R3F8 94 aa3.42□□□□□ -1.86
CNOT1-222ENST00000570139 Q1T7F1 81 aa3.4□□□□□ -1.87
CNOT1-222ENST00000570139 KRTAP4-1Q9BYQ7 146 aa3.39□□□□□ -1.87
CNOT1-222ENST00000570139 PRR15LQ9BU68 103 aa3.38□□□□□ -1.87
CNOT1-222ENST00000570139 MUC2Q02817 5179 aa3.37□□□□□ -1.87
CNOT1-222ENST00000570139 LINC01558Q9Y6Z2 57 aa3.37□□□□□ -1.87
CNOT1-222ENST00000570139 PRO2289Q9P1D8 64 aa3.36□□□□□ -1.87
CNOT1-222ENST00000570139 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
CNOT1-222ENST00000570139 A0A1B0GU69 56 aa3.33□□□□□ -1.88
CNOT1-222ENST00000570139 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
CNOT1-222ENST00000570139 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
CNOT1-222ENST00000570139 H0YAA0 97 aa3.32□□□□□ -1.88
CNOT1-222ENST00000570139 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
CNOT1-222ENST00000570139 Q5VV11 94 aa3.26□□□□□ -1.89
CNOT1-222ENST00000570139 UQCR11O14957 56 aa3.25□□□□□ -1.89
CNOT1-222ENST00000570139 CRCT1Q9UGL9 99 aa3.25□□□□□ -1.89
CNOT1-222ENST00000570139 M0R2T5 61 aa3.23□□□□□ -1.89
CNOT1-222ENST00000570139 MT1HP80294 61 aa3.22□□□□□ -1.89
CNOT1-222ENST00000570139 CRIPTQ9P021 101 aa3.21□□□□□ -1.9
CNOT1-222ENST00000570139 FSIP2Q5CZC0 6907 aa3.2□□□□□ -1.9
CNOT1-222ENST00000570139 M0QZ58 72 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms