RNA–Protein interactions for RNA: ENST00000570138.5

EDC3-218, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-218ENST00000570138 LCA10Q71F78 164 aa4.88□□□□□ -1.63
EDC3-218ENST00000570138 PSPHP1O15172 72 aa4.87□□□□□ -1.63
EDC3-218ENST00000570138 CDC42SE1Q9NRR8 79 aa4.87□□□□□ -1.63
EDC3-218ENST00000570138 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
EDC3-218ENST00000570138 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
EDC3-218ENST00000570138 IGKV2D-30A0A075B6S6 120 aa4.85□□□□□ -1.63
EDC3-218ENST00000570138 A6NN06 94 aa4.85□□□□□ -1.63
EDC3-218ENST00000570138 A8MUN3 132 aa4.85□□□□□ -1.63
EDC3-218ENST00000570138 SPINK7P58062 85 aa4.81□□□□□ -1.64
EDC3-218ENST00000570138 A6NED7 52 aa4.8□□□□□ -1.64
EDC3-218ENST00000570138 HRES1P13985 223 aa4.8□□□□□ -1.64
EDC3-218ENST00000570138 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
EDC3-218ENST00000570138 PRR15LQ9BU68 103 aa4.79□□□□□ -1.64
EDC3-218ENST00000570138 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
EDC3-218ENST00000570138 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
EDC3-218ENST00000570138 SEC61BP60468 96 aaKnown RBP4.76□□□□□ -1.65
EDC3-218ENST00000570138 COA5Q86WW8 74 aa4.71□□□□□ -1.66
EDC3-218ENST00000570138 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
EDC3-218ENST00000570138 DMAC1Q96GE9 116 aa4.7□□□□□ -1.66
EDC3-218ENST00000570138 ACYP2P14621 99 aa4.69□□□□□ -1.66
EDC3-218ENST00000570138 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
EDC3-218ENST00000570138 COX6B2Q6YFQ2 88 aa4.69□□□□□ -1.66
EDC3-218ENST00000570138 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
EDC3-218ENST00000570138 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
EDC3-218ENST00000570138 LINC01554Q52M75 96 aa4.68□□□□□ -1.66
EDC3-218ENST00000570138 KRTAP4-1Q9BYQ7 146 aa4.68□□□□□ -1.66
EDC3-218ENST00000570138 LPAP08519 4548 aa4.67□□□□□ -1.66
EDC3-218ENST00000570138 A8MU10 97 aa4.63□□□□□ -1.67
EDC3-218ENST00000570138 H3BS24 57 aa4.61□□□□□ -1.67
EDC3-218ENST00000570138 H1FX-AS1Q4G0G2 97 aa4.59□□□□□ -1.67
EDC3-218ENST00000570138 MUC17Q685J3 4493 aa4.59□□□□□ -1.68
EDC3-218ENST00000570138 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
EDC3-218ENST00000570138 LORP23490 312 aaPredicted RBP4.56□□□□□ -1.68
EDC3-218ENST00000570138 KRTAP19-2Q3LHN2 52 aa4.55□□□□□ -1.68
EDC3-218ENST00000570138 KRTAP9-7A8MTY7 169 aa4.54□□□□□ -1.68
EDC3-218ENST00000570138 S4R3F8 94 aa4.53□□□□□ -1.68
EDC3-218ENST00000570138 UQCR11O14957 56 aa4.52□□□□□ -1.69
EDC3-218ENST00000570138 A0A1B0GU69 56 aa4.48□□□□□ -1.69
EDC3-218ENST00000570138 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
EDC3-218ENST00000570138 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
EDC3-218ENST00000570138 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
EDC3-218ENST00000570138 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.71
EDC3-218ENST00000570138 ROMO1P60602 79 aa4.36□□□□□ -1.71
EDC3-218ENST00000570138 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
EDC3-218ENST00000570138 MT1HP80294 61 aa4.35□□□□□ -1.71
EDC3-218ENST00000570138 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.71
EDC3-218ENST00000570138 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
EDC3-218ENST00000570138 H0YAA0 97 aa4.33□□□□□ -1.72
EDC3-218ENST00000570138 FLGP20930 4061 aaPredicted RBP4.31□□□□□ -1.72
EDC3-218ENST00000570138 P0C880 135 aa4.31□□□□□ -1.72
EDC3-218ENST00000570138 M0R2T5 61 aa4.3□□□□□ -1.72
EDC3-218ENST00000570138 A0A1B0GU33 70 aa4.29□□□□□ -1.72
EDC3-218ENST00000570138 K7ERS5 55 aa4.27□□□□□ -1.73
EDC3-218ENST00000570138 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
EDC3-218ENST00000570138 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
EDC3-218ENST00000570138 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
EDC3-218ENST00000570138 M0QZ58 72 aa4.19□□□□□ -1.74
EDC3-218ENST00000570138 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
EDC3-218ENST00000570138 MT2AP02795 61 aa4.18□□□□□ -1.74
EDC3-218ENST00000570138 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
EDC3-218ENST00000570138 USH2AO75445 5202 aa4.17□□□□□ -1.74
EDC3-218ENST00000570138 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
EDC3-218ENST00000570138 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
EDC3-218ENST00000570138 R4GN34 69 aa4.16□□□□□ -1.74
EDC3-218ENST00000570138 MT1FP04733 61 aa4.15□□□□□ -1.75
EDC3-218ENST00000570138 KRTAP10-10P60014 251 aa4.15□□□□□ -1.75
EDC3-218ENST00000570138 CRIPTQ9P021 101 aa4.15□□□□□ -1.75
EDC3-218ENST00000570138 A0A0D9SG42 100 aa4.13□□□□□ -1.75
EDC3-218ENST00000570138 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
EDC3-218ENST00000570138 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
EDC3-218ENST00000570138 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
EDC3-218ENST00000570138 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
EDC3-218ENST00000570138 KRTAP12-1P59990 96 aa4.05□□□□□ -1.76
EDC3-218ENST00000570138 SPINT4Q6UDR6 99 aa4.05□□□□□ -1.76
EDC3-218ENST00000570138 NEBP20929 6669 aa4.04□□□□□ -1.76
EDC3-218ENST00000570138 KRTAP12-2P59991 146 aa4.03□□□□□ -1.76
EDC3-218ENST00000570138 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
EDC3-218ENST00000570138 KRTAP15-1Q3LI76 137 aa4.01□□□□□ -1.77
EDC3-218ENST00000570138 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
EDC3-218ENST00000570138 NDUFAF8A1L188 74 aa3.96□□□□□ -1.78
EDC3-218ENST00000570138 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
EDC3-218ENST00000570138 MT1BP07438 61 aa3.94□□□□□ -1.78
EDC3-218ENST00000570138 KRTAP20-1Q3LI63 56 aa3.94□□□□□ -1.78
EDC3-218ENST00000570138 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
EDC3-218ENST00000570138 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
EDC3-218ENST00000570138 MUC12Q9UKN1 5478 aa3.88□□□□□ -1.79
EDC3-218ENST00000570138 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
EDC3-218ENST00000570138 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
EDC3-218ENST00000570138 KRTAP4-8Q9BYQ9 185 aa3.8□□□□□ -1.8
EDC3-218ENST00000570138 MT1XP80297 61 aa3.79□□□□□ -1.8
EDC3-218ENST00000570138 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
EDC3-218ENST00000570138 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
EDC3-218ENST00000570138 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
EDC3-218ENST00000570138 TNP1P09430 55 aa3.71□□□□□ -1.82
EDC3-218ENST00000570138 KMT2DO14686 5537 aa3.71□□□□□ -1.82
EDC3-218ENST00000570138 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
EDC3-218ENST00000570138 PP632Q6XCG6 107 aa3.69□□□□□ -1.82
EDC3-218ENST00000570138 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
EDC3-218ENST00000570138 KRTAP4-12Q9BQ66 201 aa3.68□□□□□ -1.82
EDC3-218ENST00000570138 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms