RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-222ENST00000569963 CSAG1Q6PB30 78 aa9.32□□□□□ -0.92
NAE1-222ENST00000569963 KRTAP9-3Q9BYQ3 159 aa9.28□□□□□ -0.92
NAE1-222ENST00000569963 FSIP2Q5CZC0 6907 aa9.23□□□□□ -0.93
NAE1-222ENST00000569963 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
NAE1-222ENST00000569963 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
NAE1-222ENST00000569963 NDUFC1O43677 76 aa9.18□□□□□ -0.94
NAE1-222ENST00000569963 DMAC1Q96GE9 116 aa9.18□□□□□ -0.94
NAE1-222ENST00000569963 CRCT1Q9UGL9 99 aa9.17□□□□□ -0.94
NAE1-222ENST00000569963 SNURFQ9Y675 71 aa9.1□□□□□ -0.95
NAE1-222ENST00000569963 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
NAE1-222ENST00000569963 USH2AO75445 5202 aa9.08□□□□□ -0.96
NAE1-222ENST00000569963 H0YAA0 97 aa9.05□□□□□ -0.96
NAE1-222ENST00000569963 ACYP2P14621 99 aa9.04□□□□□ -0.96
NAE1-222ENST00000569963 COX7CP15954 63 aa9.01□□□□□ -0.97
NAE1-222ENST00000569963 SPANXA2-OT1Q8N9U9 137 aa9□□□□□ -0.97
NAE1-222ENST00000569963 KRTAP19-1Q8IUB9 90 aa8.96□□□□□ -0.98
NAE1-222ENST00000569963 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
NAE1-222ENST00000569963 SPRR2GQ9BYE4 73 aa8.92□□□□□ -0.98
NAE1-222ENST00000569963 SSPOA2VEC9 5147 aa8.91□□□□□ -0.98
NAE1-222ENST00000569963 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.98
NAE1-222ENST00000569963 SPTSSBQ8NFR3 76 aa8.87□□□□□ -0.99
NAE1-222ENST00000569963 ANAPC13Q9BS18 74 aa8.85□□□□□ -0.99
NAE1-222ENST00000569963 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
NAE1-222ENST00000569963 KRTAP19-8Q3LI54 63 aa8.81□□□□□ -1
NAE1-222ENST00000569963 H7BZZ5 65 aa8.79□□□□□ -1
NAE1-222ENST00000569963 KRTAP19-6Q3LI70 58 aa8.78□□□□□ -1
NAE1-222ENST00000569963 CYSTM1Q9H1C7 97 aa8.77□□□□□ -1.01
NAE1-222ENST00000569963 Q5VV11 94 aa8.76□□□□□ -1.01
NAE1-222ENST00000569963 MT1BP07438 61 aa8.73□□□□□ -1.01
NAE1-222ENST00000569963 P0C880 135 aa8.73□□□□□ -1.01
NAE1-222ENST00000569963 COA5Q86WW8 74 aa8.68□□□□□ -1.02
NAE1-222ENST00000569963 FCGBPQ9Y6R7 5405 aaPredicted RBP8.68□□□□□ -1.02
NAE1-222ENST00000569963 R4GN34 69 aa8.66□□□□□ -1.02
NAE1-222ENST00000569963 CCDC179H3BU77 68 aa8.65□□□□□ -1.02
NAE1-222ENST00000569963 M0QZ58 72 aa8.58□□□□□ -1.04
NAE1-222ENST00000569963 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.51□□□□□ -1.05
NAE1-222ENST00000569963 ATP5EP56381 51 aaPredicted RBP8.5□□□□□ -1.05
NAE1-222ENST00000569963 A6NN06 94 aa8.49□□□□□ -1.05
NAE1-222ENST00000569963 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
NAE1-222ENST00000569963 PLAC4Q8WY50 150 aa8.45□□□□□ -1.06
NAE1-222ENST00000569963 SEC61GP60059 68 aa8.43□□□□□ -1.06
NAE1-222ENST00000569963 LINC01554Q52M75 96 aa8.41□□□□□ -1.06
NAE1-222ENST00000569963 SERP1Q9Y6X1 66 aa8.4□□□□□ -1.06
NAE1-222ENST00000569963 MACF1Q9UPN3 7388 aaKnown RBP8.4□□□□□ -1.07
NAE1-222ENST00000569963 TMEM258P61165 79 aa8.39□□□□□ -1.07
NAE1-222ENST00000569963 PRO2289Q9P1D8 64 aa8.31□□□□□ -1.08
NAE1-222ENST00000569963 KRTAP13-4Q3LI77 160 aa8.3□□□□□ -1.08
NAE1-222ENST00000569963 KRTAP9-7A8MTY7 169 aa8.29□□□□□ -1.08
NAE1-222ENST00000569963 MT1XP80297 61 aa8.27□□□□□ -1.09
NAE1-222ENST00000569963 A0A1B0GU33 70 aa8.25□□□□□ -1.09
NAE1-222ENST00000569963 A0A1B0GU69 56 aa8.24□□□□□ -1.09
NAE1-222ENST00000569963 SYNE2Q8WXH0 6885 aaKnown RBP8.24□□□□□ -1.09
NAE1-222ENST00000569963 LOC100996750A0A140TA64 210 aa8.14□□□□□ -1.11
NAE1-222ENST00000569963 KRTAP4-6Q9BYQ5 205 aa8.14□□□□□ -1.11
NAE1-222ENST00000569963 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
NAE1-222ENST00000569963 SPATA8Q6RVD6 105 aa8.13□□□□□ -1.11
NAE1-222ENST00000569963 PRR15LQ9BU68 103 aa8.12□□□□□ -1.11
NAE1-222ENST00000569963 KRTAP6-3Q3LI67 103 aa8.11□□□□□ -1.11
NAE1-222ENST00000569963 A0A0D9SG42 100 aa8.06□□□□□ -1.12
NAE1-222ENST00000569963 KRTAP12-2P59991 146 aa8.05□□□□□ -1.12
NAE1-222ENST00000569963 SMIM26A0A096LP01 95 aa8.02□□□□□ -1.13
NAE1-222ENST00000569963 CAMK2N1Q7Z7J9 78 aa8□□□□□ -1.13
NAE1-222ENST00000569963 PCP4P48539 62 aa7.99□□□□□ -1.13
NAE1-222ENST00000569963 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
NAE1-222ENST00000569963 SPINT4Q6UDR6 99 aa7.94□□□□□ -1.14
NAE1-222ENST00000569963 A8MU10 97 aa7.9□□□□□ -1.14
NAE1-222ENST00000569963 KRTAP5-9P26371 169 aa7.9□□□□□ -1.14
NAE1-222ENST00000569963 V9GYY9 64 aa7.9□□□□□ -1.14
NAE1-222ENST00000569963 KRTAP10-7P60409 375 aaPredicted RBP7.89□□□□□ -1.15
NAE1-222ENST00000569963 KRTAP10-12P60413 245 aa7.89□□□□□ -1.15
NAE1-222ENST00000569963 UQCR11O14957 56 aa7.86□□□□□ -1.15
NAE1-222ENST00000569963 Q1T7F1 81 aa7.85□□□□□ -1.15
NAE1-222ENST00000569963 KMT2DO14686 5537 aa7.84□□□□□ -1.15
NAE1-222ENST00000569963 KRTAP8-1Q8IUC2 63 aa7.8□□□□□ -1.16
NAE1-222ENST00000569963 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
NAE1-222ENST00000569963 KRTAP4-8A0A0G2JLE6 195 aa7.77□□□□□ -1.17
NAE1-222ENST00000569963 KRTAP4-8Q9BYQ9 185 aa7.77□□□□□ -1.17
NAE1-222ENST00000569963 PSPHP1O15172 72 aa7.73□□□□□ -1.17
NAE1-222ENST00000569963 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.17
NAE1-222ENST00000569963 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
NAE1-222ENST00000569963 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
NAE1-222ENST00000569963 NEBP20929 6669 aa7.69□□□□□ -1.18
NAE1-222ENST00000569963 MDN1Q9NU22 5596 aa7.58□□□□□ -1.2
NAE1-222ENST00000569963 C10orf95Q9H7T3 257 aa7.57□□□□□ -1.2
NAE1-222ENST00000569963 SPRR2EP22531 72 aa7.51□□□□□ -1.21
NAE1-222ENST00000569963 SPRR2BP35325 72 aa7.51□□□□□ -1.21
NAE1-222ENST00000569963 SPRR2AP35326 72 aa7.51□□□□□ -1.21
NAE1-222ENST00000569963 A6NED7 52 aa7.5□□□□□ -1.21
NAE1-222ENST00000569963 K7ERS5 55 aa7.5□□□□□ -1.21
NAE1-222ENST00000569963 TNP1P09430 55 aa7.5□□□□□ -1.21
NAE1-222ENST00000569963 LCE1AQ5T7P2 110 aa7.48□□□□□ -1.21
NAE1-222ENST00000569963 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.22
NAE1-222ENST00000569963 H3BS24 57 aa7.39□□□□□ -1.23
NAE1-222ENST00000569963 MT1EP04732 61 aa7.31□□□□□ -1.24
NAE1-222ENST00000569963 KRTAP20-1Q3LI63 56 aa7.31□□□□□ -1.24
NAE1-222ENST00000569963 LCE3AQ5TA76 89 aa7.3□□□□□ -1.24
NAE1-222ENST00000569963 KRTAP19-5Q3LI72 72 aa7.29□□□□□ -1.24
NAE1-222ENST00000569963 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
NAE1-222ENST00000569963 KRTAP25-1Q3LHN0 102 aa7.27□□□□□ -1.25
NAE1-222ENST00000569963 CDC42SE1Q9NRR8 79 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms