RNA–Protein interactions for RNA: ENST00000569476.2

LINC00559-201, long intergenic non-protein coding RNA 559, humanhuman

TSL 1 (best) BASIC

Gene LINC00559, Length 3,867 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00559-201ENST00000569476 K7ERS5 55 aa4.02□□□□□ -1.77
LINC00559-201ENST00000569476 H0YAA0 97 aa4.01□□□□□ -1.77
LINC00559-201ENST00000569476 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
LINC00559-201ENST00000569476 LRP1Q07954 4544 aaKnown RBP3.98□□□□□ -1.77
LINC00559-201ENST00000569476 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
LINC00559-201ENST00000569476 MYCBP2O75592 4640 aa3.96□□□□□ -1.78
LINC00559-201ENST00000569476 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
LINC00559-201ENST00000569476 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
LINC00559-201ENST00000569476 CSAG1Q6PB30 78 aa3.94□□□□□ -1.78
LINC00559-201ENST00000569476 KRTAP3-2Q9BYR7 98 aa3.94□□□□□ -1.78
LINC00559-201ENST00000569476 M0QZ58 72 aa3.92□□□□□ -1.78
LINC00559-201ENST00000569476 MUC17Q685J3 4493 aa3.9□□□□□ -1.78
LINC00559-201ENST00000569476 KMT2CQ8NEZ4 4911 aaKnown RBP3.9□□□□□ -1.79
LINC00559-201ENST00000569476 RYR3Q15413 4870 aa3.88□□□□□ -1.79
LINC00559-201ENST00000569476 ROMO1P60602 79 aa3.86□□□□□ -1.79
LINC00559-201ENST00000569476 ADM2Q7Z4H4 148 aa3.84□□□□□ -1.79
LINC00559-201ENST00000569476 LINC01554Q52M75 96 aa3.84□□□□□ -1.8
LINC00559-201ENST00000569476 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
LINC00559-201ENST00000569476 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
LINC00559-201ENST00000569476 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
LINC00559-201ENST00000569476 P0C880 135 aa3.8□□□□□ -1.8
LINC00559-201ENST00000569476 KRTAP4-5Q9BYR2 181 aa3.78□□□□□ -1.8
LINC00559-201ENST00000569476 CRIPTQ9P021 101 aa3.77□□□□□ -1.81
LINC00559-201ENST00000569476 H3BS24 57 aa3.76□□□□□ -1.81
LINC00559-201ENST00000569476 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
LINC00559-201ENST00000569476 KIAA1109Q2LD37 5005 aa3.74□□□□□ -1.81
LINC00559-201ENST00000569476 KRTAP19-2Q3LHN2 52 aa3.73□□□□□ -1.81
LINC00559-201ENST00000569476 A0A0D9SG42 100 aa3.71□□□□□ -1.82
LINC00559-201ENST00000569476 HERC2O95714 4834 aa3.71□□□□□ -1.82
LINC00559-201ENST00000569476 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
LINC00559-201ENST00000569476 BIRC6Q9NR09 4857 aa3.69□□□□□ -1.82
LINC00559-201ENST00000569476 R4GN34 69 aa3.69□□□□□ -1.82
LINC00559-201ENST00000569476 DMBT1Q9UGM3 2413 aaPredicted RBP3.69□□□□□ -1.82
LINC00559-201ENST00000569476 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
LINC00559-201ENST00000569476 EPPK1P58107 5090 aaKnown RBP3.67□□□□□ -1.82
LINC00559-201ENST00000569476 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
LINC00559-201ENST00000569476 HERC1Q15751 4861 aa3.62□□□□□ -1.83
LINC00559-201ENST00000569476 KRTAP23-1A1A580 65 aa3.6□□□□□ -1.83
LINC00559-201ENST00000569476 LRP2P98164 4655 aa3.59□□□□□ -1.83
LINC00559-201ENST00000569476 PP632Q6XCG6 107 aa3.59□□□□□ -1.83
LINC00559-201ENST00000569476 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.83
LINC00559-201ENST00000569476 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
LINC00559-201ENST00000569476 LPAP08519 4548 aa3.53□□□□□ -1.84
LINC00559-201ENST00000569476 M0R2T5 61 aa3.52□□□□□ -1.85
LINC00559-201ENST00000569476 LORP23490 312 aaPredicted RBP3.52□□□□□ -1.85
LINC00559-201ENST00000569476 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
LINC00559-201ENST00000569476 C10orf95Q9H7T3 257 aa3.51□□□□□ -1.85
LINC00559-201ENST00000569476 SPRR2GQ9BYE4 73 aa3.5□□□□□ -1.85
LINC00559-201ENST00000569476 A0A0A0MQY5 61 aa3.5□□□□□ -1.85
LINC00559-201ENST00000569476 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
LINC00559-201ENST00000569476 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
LINC00559-201ENST00000569476 TNP1P09430 55 aa3.44□□□□□ -1.86
LINC00559-201ENST00000569476 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
LINC00559-201ENST00000569476 MT1HP80294 61 aa3.43□□□□□ -1.86
LINC00559-201ENST00000569476 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
LINC00559-201ENST00000569476 KRTAP19-8Q3LI54 63 aa3.4□□□□□ -1.86
LINC00559-201ENST00000569476 PCLOQ9Y6V0 5065 aa3.39□□□□□ -1.87
LINC00559-201ENST00000569476 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
LINC00559-201ENST00000569476 MT2AP02795 61 aa3.36□□□□□ -1.87
LINC00559-201ENST00000569476 KRTAP9-8Q9BYQ0 159 aa3.34□□□□□ -1.87
LINC00559-201ENST00000569476 MT1FP04733 61 aa3.31□□□□□ -1.88
LINC00559-201ENST00000569476 KRTAP10-10P60014 251 aa3.31□□□□□ -1.88
LINC00559-201ENST00000569476 SPRR5A0A1B0GTR4 108 aa3.25□□□□□ -1.89
LINC00559-201ENST00000569476 MT1BP07438 61 aa3.23□□□□□ -1.89
LINC00559-201ENST00000569476 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
LINC00559-201ENST00000569476 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
LINC00559-201ENST00000569476 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
LINC00559-201ENST00000569476 KRTAP8-1Q8IUC2 63 aa3.21□□□□□ -1.9
LINC00559-201ENST00000569476 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
LINC00559-201ENST00000569476 NDUFAF8A1L188 74 aa3.19□□□□□ -1.9
LINC00559-201ENST00000569476 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
LINC00559-201ENST00000569476 MT1XP80297 61 aa3.18□□□□□ -1.9
LINC00559-201ENST00000569476 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
LINC00559-201ENST00000569476 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
LINC00559-201ENST00000569476 LCE2DQ5TA82 110 aaPredicted RBP3.15□□□□□ -1.91
LINC00559-201ENST00000569476 LCE2AQ5TA79 106 aaPredicted RBP3.14□□□□□ -1.91
LINC00559-201ENST00000569476 FAT4Q6V0I7 4981 aa3.13□□□□□ -1.91
LINC00559-201ENST00000569476 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
LINC00559-201ENST00000569476 MUC2Q02817 5179 aa3.1□□□□□ -1.91
LINC00559-201ENST00000569476 KRTAP12-3P60328 96 aa3.06□□□□□ -1.92
LINC00559-201ENST00000569476 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
LINC00559-201ENST00000569476 LCE2BO14633 110 aa3.02□□□□□ -1.93
LINC00559-201ENST00000569476 KRTAP9-2Q9BYQ4 174 aa3.02□□□□□ -1.93
LINC00559-201ENST00000569476 KRTAP10-7P60409 375 aaPredicted RBP3□□□□□ -1.93
LINC00559-201ENST00000569476 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
LINC00559-201ENST00000569476 CRCT1Q9UGL9 99 aa2.98□□□□□ -1.93
LINC00559-201ENST00000569476 KRTAP19-6Q3LI70 58 aa2.92□□□□□ -1.94
LINC00559-201ENST00000569476 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
LINC00559-201ENST00000569476 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
LINC00559-201ENST00000569476 INE1O15225 51 aa2.87□□□□□ -1.95
LINC00559-201ENST00000569476 KRTAP19-7Q3SYF9 63 aa2.83□□□□□ -1.96
LINC00559-201ENST00000569476 MT1EP04732 61 aa2.79□□□□□ -1.96
LINC00559-201ENST00000569476 MT1LQ93083 61 aa2.77□□□□□ -1.97
LINC00559-201ENST00000569476 KRTAP4-8A0A0G2JLE6 195 aa2.74□□□□□ -1.97
LINC00559-201ENST00000569476 KRTAP4-8Q9BYQ9 185 aa2.74□□□□□ -1.97
LINC00559-201ENST00000569476 KRTAP9-7A8MTY7 169 aa2.73□□□□□ -1.97
LINC00559-201ENST00000569476 USH2AO75445 5202 aa2.73□□□□□ -1.97
LINC00559-201ENST00000569476 SSPOA2VEC9 5147 aa2.72□□□□□ -1.97
LINC00559-201ENST00000569476 KRTAP2-3P0C7H8 128 aa2.7□□□□□ -1.98
LINC00559-201ENST00000569476 KRTAP2-4Q9BYR9 128 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms