RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
CCDC113-205ENST00000569374 HRCT1Q6UXD1 115 aa4.49□□□□□ -1.69
CCDC113-205ENST00000569374 MMP24-AS1A0A0U1RRL7 71 aa4.48□□□□□ -1.69
CCDC113-205ENST00000569374 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
CCDC113-205ENST00000569374 ASB16-AS1Q495Z4 193 aa4.48□□□□□ -1.69
CCDC113-205ENST00000569374 C1orf64Q8NEQ6 169 aa4.48□□□□□ -1.69
CCDC113-205ENST00000569374 Q1T7F1 81 aa4.47□□□□□ -1.69
CCDC113-205ENST00000569374 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
CCDC113-205ENST00000569374 C8orf17Q9NRJ1 99 aa4.47□□□□□ -1.69
CCDC113-205ENST00000569374 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
CCDC113-205ENST00000569374 C1orf195Q5TG92 126 aa4.46□□□□□ -1.7
CCDC113-205ENST00000569374 Q96NJ1 140 aa4.46□□□□□ -1.7
CCDC113-205ENST00000569374 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
CCDC113-205ENST00000569374 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
CCDC113-205ENST00000569374 FAM229BQ4G0N7 80 aa4.44□□□□□ -1.7
CCDC113-205ENST00000569374 IGHV6-1A0A0B4J1U7 121 aa4.43□□□□□ -1.7
CCDC113-205ENST00000569374 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
CCDC113-205ENST00000569374 LOC101927531A0A1B0GV80 90 aa4.42□□□□□ -1.7
CCDC113-205ENST00000569374 NDUFS5O43920 106 aa4.42□□□□□ -1.7
CCDC113-205ENST00000569374 PSPHP1O15172 72 aa4.41□□□□□ -1.7
CCDC113-205ENST00000569374 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
CCDC113-205ENST00000569374 KRTAP13-2Q52LG2 175 aa4.41□□□□□ -1.7
CCDC113-205ENST00000569374 RETNLBQ9BQ08 111 aa4.4□□□□□ -1.71
CCDC113-205ENST00000569374 MUC2Q02817 5179 aa4.4□□□□□ -1.71
CCDC113-205ENST00000569374 LCE3CQ5T5A8 94 aa4.39□□□□□ -1.71
CCDC113-205ENST00000569374 LINC00313P59037 77 aa4.37□□□□□ -1.71
CCDC113-205ENST00000569374 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
CCDC113-205ENST00000569374 COA5Q86WW8 74 aa4.35□□□□□ -1.71
CCDC113-205ENST00000569374 SPINK1P00995 79 aa4.33□□□□□ -1.72
CCDC113-205ENST00000569374 ACYP2P14621 99 aa4.33□□□□□ -1.72
CCDC113-205ENST00000569374 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
CCDC113-205ENST00000569374 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
CCDC113-205ENST00000569374 PCOTHQ58A44 107 aa4.32□□□□□ -1.72
CCDC113-205ENST00000569374 MUC17Q685J3 4493 aa4.3□□□□□ -1.72
CCDC113-205ENST00000569374 Q5W150 140 aa4.29□□□□□ -1.72
CCDC113-205ENST00000569374 LINC00304Q8N9R0 145 aa4.29□□□□□ -1.72
CCDC113-205ENST00000569374 LINC01558Q9Y6Z2 57 aa4.29□□□□□ -1.72
CCDC113-205ENST00000569374 FAT4Q6V0I7 4981 aa4.29□□□□□ -1.72
CCDC113-205ENST00000569374 CHKB-CPT1BH3BT56 60 aa4.28□□□□□ -1.72
CCDC113-205ENST00000569374 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
CCDC113-205ENST00000569374 A8MUN3 132 aa4.27□□□□□ -1.73
CCDC113-205ENST00000569374 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
CCDC113-205ENST00000569374 HRES1P13985 223 aa4.26□□□□□ -1.73
CCDC113-205ENST00000569374 Q5VV11 94 aa4.26□□□□□ -1.73
CCDC113-205ENST00000569374 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
CCDC113-205ENST00000569374 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
CCDC113-205ENST00000569374 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
CCDC113-205ENST00000569374 A6NED7 52 aa4.24□□□□□ -1.73
CCDC113-205ENST00000569374 ATP11AUNQ6ZP68 121 aa4.23□□□□□ -1.73
CCDC113-205ENST00000569374 LCE1EQ5T753 118 aa4.22□□□□□ -1.73
CCDC113-205ENST00000569374 TPRXLQ17RH7 258 aa4.21□□□□□ -1.74
CCDC113-205ENST00000569374 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
CCDC113-205ENST00000569374 SPTSSBQ8NFR3 76 aa4.2□□□□□ -1.74
CCDC113-205ENST00000569374 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
CCDC113-205ENST00000569374 PMAIP1Q13794 54 aa4.17□□□□□ -1.74
CCDC113-205ENST00000569374 LUZP6Q538Z0 58 aa4.17□□□□□ -1.74
CCDC113-205ENST00000569374 A0A1B0GU69 56 aa4.16□□□□□ -1.74
CCDC113-205ENST00000569374 KRTAP10-7P60409 375 aaPredicted RBP4.15□□□□□ -1.75
CCDC113-205ENST00000569374 A8MUU9 505 aa4.12□□□□□ -1.75
CCDC113-205ENST00000569374 KRTAP19-2Q3LHN2 52 aa4.12□□□□□ -1.75
CCDC113-205ENST00000569374 LCA10Q71F78 164 aa4.12□□□□□ -1.75
CCDC113-205ENST00000569374 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
CCDC113-205ENST00000569374 UQCR11O14957 56 aa4.11□□□□□ -1.75
CCDC113-205ENST00000569374 C9orf92A6NGG3 77 aa4.09□□□□□ -1.75
CCDC113-205ENST00000569374 SPINK7P58062 85 aa4.08□□□□□ -1.76
CCDC113-205ENST00000569374 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
CCDC113-205ENST00000569374 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
CCDC113-205ENST00000569374 A6NN06 94 aa4.05□□□□□ -1.76
CCDC113-205ENST00000569374 MIR22HGQ0VDD5 57 aa4.05□□□□□ -1.76
CCDC113-205ENST00000569374 FSIP2Q5CZC0 6907 aa4.05□□□□□ -1.76
CCDC113-205ENST00000569374 MT1HP80294 61 aa4.03□□□□□ -1.76
CCDC113-205ENST00000569374 KRTAP12-2P59991 146 aa4.02□□□□□ -1.77
CCDC113-205ENST00000569374 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
CCDC113-205ENST00000569374 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
CCDC113-205ENST00000569374 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CCDC113-205ENST00000569374 SPINT4Q6UDR6 99 aa3.99□□□□□ -1.77
CCDC113-205ENST00000569374 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
CCDC113-205ENST00000569374 K7ERS5 55 aa3.97□□□□□ -1.77
CCDC113-205ENST00000569374 RPL37P61927 97 aaKnown RBP3.96□□□□□ -1.78
CCDC113-205ENST00000569374 A0A1B0GU33 70 aa3.94□□□□□ -1.78
CCDC113-205ENST00000569374 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.79
CCDC113-205ENST00000569374 CRCT1Q9UGL9 99 aa3.9□□□□□ -1.79
CCDC113-205ENST00000569374 S4R3F8 94 aa3.85□□□□□ -1.79
CCDC113-205ENST00000569374 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
CCDC113-205ENST00000569374 M0R2T5 61 aa3.84□□□□□ -1.79
CCDC113-205ENST00000569374 H0YAA0 97 aa3.83□□□□□ -1.8
CCDC113-205ENST00000569374 USH2AO75445 5202 aa3.81□□□□□ -1.8
CCDC113-205ENST00000569374 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
CCDC113-205ENST00000569374 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
CCDC113-205ENST00000569374 CSAG1Q6PB30 78 aa3.77□□□□□ -1.81
CCDC113-205ENST00000569374 MT2AP02795 61 aa3.76□□□□□ -1.81
CCDC113-205ENST00000569374 LINC01554Q52M75 96 aa3.76□□□□□ -1.81
CCDC113-205ENST00000569374 MT1FP04733 61 aa3.75□□□□□ -1.81
CCDC113-205ENST00000569374 SPRR5A0A1B0GTR4 108 aa3.73□□□□□ -1.81
CCDC113-205ENST00000569374 M0QZ58 72 aa3.73□□□□□ -1.81
CCDC113-205ENST00000569374 ROMO1P60602 79 aa3.72□□□□□ -1.81
CCDC113-205ENST00000569374 ADM2Q7Z4H4 148 aa3.72□□□□□ -1.81
CCDC113-205ENST00000569374 R4GN34 69 aa3.71□□□□□ -1.82
CCDC113-205ENST00000569374 KRTAP25-1Q3LHN0 102 aa3.7□□□□□ -1.82
CCDC113-205ENST00000569374 FCGBPQ9Y6R7 5405 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms