RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 CHIC1Q5VXU3 224 aa26.91■■□□□ 1.9
CCDC113-205ENST00000569374 AEBP2Q6ZN18 517 aaPredicted RBP26.61■■□□□ 1.85
CCDC113-205ENST00000569374 PHF23Q9BUL5 403 aaPredicted RBP23.65■■□□□ 1.38
CCDC113-205ENST00000569374 SENP3Q9H4L4 574 aaPredicted RBP22.64■■□□□ 1.21
CCDC113-205ENST00000569374 PLPPR3Q6T4P5 718 aa22.31■■□□□ 1.16
CCDC113-205ENST00000569374 FOXD1Q16676 465 aa20.79■□□□□ 0.92
CCDC113-205ENST00000569374 ADRA2BP18089 450 aa20.68■□□□□ 0.9
CCDC113-205ENST00000569374 PPP6R1Q9UPN7 881 aa20.59■□□□□ 0.89
CCDC113-205ENST00000569374 KCNA4P22459 653 aa20.11■□□□□ 0.81
CCDC113-205ENST00000569374 PIAS4Q8N2W9 510 aaPredicted RBP19.88■□□□□ 0.77
CCDC113-205ENST00000569374 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
CCDC113-205ENST00000569374 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
CCDC113-205ENST00000569374 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
CCDC113-205ENST00000569374 SLC4A1APQ9BWU0 796 aaKnown RBP19.39■□□□□ 0.69
CCDC113-205ENST00000569374 SCAF1Q9H7N4 1312 aaKnown RBP19.12■□□□□ 0.65
CCDC113-205ENST00000569374 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
CCDC113-205ENST00000569374 CSRNP3Q8WYN3 585 aa19.08■□□□□ 0.64
CCDC113-205ENST00000569374 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
CCDC113-205ENST00000569374 MSH5O43196 834 aa19■□□□□ 0.63
CCDC113-205ENST00000569374 NISCHQ9Y2I1 1504 aa18.9■□□□□ 0.62
CCDC113-205ENST00000569374 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
CCDC113-205ENST00000569374 ZBTB22O15209 634 aa18.45■□□□□ 0.54
CCDC113-205ENST00000569374 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
CCDC113-205ENST00000569374 RNF216Q9NWF9 866 aaPredicted RBP18.43■□□□□ 0.54
CCDC113-205ENST00000569374 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
CCDC113-205ENST00000569374 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
CCDC113-205ENST00000569374 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
CCDC113-205ENST00000569374 SLC4A2P04920 1241 aa17.78■□□□□ 0.44
CCDC113-205ENST00000569374 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
CCDC113-205ENST00000569374 ATXN8OSP0DMR3 200 aa17.72■□□□□ 0.43
CCDC113-205ENST00000569374 DCAF8L1A6NGE4 600 aa17.36■□□□□ 0.37
CCDC113-205ENST00000569374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCDC113-205ENST00000569374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
CCDC113-205ENST00000569374 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
CCDC113-205ENST00000569374 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
CCDC113-205ENST00000569374 FKBP8Q14318 412 aa17.26■□□□□ 0.35
CCDC113-205ENST00000569374 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
CCDC113-205ENST00000569374 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
CCDC113-205ENST00000569374 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
CCDC113-205ENST00000569374 ATF5Q9Y2D1 282 aaPredicted RBP17.01■□□□□ 0.31
CCDC113-205ENST00000569374 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
CCDC113-205ENST00000569374 APLP2Q06481 763 aa16.96■□□□□ 0.31
CCDC113-205ENST00000569374 SLC24A1O60721 1099 aa16.9■□□□□ 0.3
CCDC113-205ENST00000569374 ABCC9O60706 1549 aa16.83■□□□□ 0.28
CCDC113-205ENST00000569374 ZNF219Q9P2Y4 722 aaPredicted RBP16.79■□□□□ 0.28
CCDC113-205ENST00000569374 FBXO3Q9UK99 471 aa16.57■□□□□ 0.24
CCDC113-205ENST00000569374 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
CCDC113-205ENST00000569374 FBLN2P98095 1184 aa16.47■□□□□ 0.23
CCDC113-205ENST00000569374 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
CCDC113-205ENST00000569374 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
CCDC113-205ENST00000569374 POLA2Q14181 598 aa16.29■□□□□ 0.2
CCDC113-205ENST00000569374 PROM2Q8N271 834 aa16.29■□□□□ 0.2
CCDC113-205ENST00000569374 CAPN15O75808 1086 aa16.28■□□□□ 0.2
CCDC113-205ENST00000569374 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
CCDC113-205ENST00000569374 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
CCDC113-205ENST00000569374 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
CCDC113-205ENST00000569374 VASPP50552 380 aaPredicted RBP16.2■□□□□ 0.18
CCDC113-205ENST00000569374 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
CCDC113-205ENST00000569374 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
CCDC113-205ENST00000569374 IFNLR1Q8IU57 520 aaPredicted RBP15.98■□□□□ 0.15
CCDC113-205ENST00000569374 ABCB7O75027 752 aa15.96■□□□□ 0.15
CCDC113-205ENST00000569374 UNC13AQ9UPW8 1703 aa15.94■□□□□ 0.14
CCDC113-205ENST00000569374 NACADO15069 1562 aa15.88■□□□□ 0.13
CCDC113-205ENST00000569374 DCAF8L2P0C7V8 631 aa15.86■□□□□ 0.13
CCDC113-205ENST00000569374 PLCB2Q00722 1185 aa15.86■□□□□ 0.13
CCDC113-205ENST00000569374 ZNF692Q9BU19 519 aaPredicted RBP15.84■□□□□ 0.13
CCDC113-205ENST00000569374 STAG3Q9UJ98 1225 aa15.82■□□□□ 0.12
CCDC113-205ENST00000569374 KLHL34Q8N239 644 aa15.8■□□□□ 0.12
CCDC113-205ENST00000569374 SPDYE2BA6NHP3 402 aa15.78■□□□□ 0.12
CCDC113-205ENST00000569374 SPDYE6P0CI01 402 aa15.78■□□□□ 0.12
CCDC113-205ENST00000569374 SPDYE2Q495Y8 402 aa15.78■□□□□ 0.12
CCDC113-205ENST00000569374 PKD2Q13563 968 aa15.76■□□□□ 0.11
CCDC113-205ENST00000569374 DSG3P32926 999 aa15.75■□□□□ 0.11
CCDC113-205ENST00000569374 SPOCK2Q92563 424 aa15.75■□□□□ 0.11
CCDC113-205ENST00000569374 ZCCHC6Q5VYS8 1495 aaKnown RBP15.75■□□□□ 0.11
CCDC113-205ENST00000569374 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
CCDC113-205ENST00000569374 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
CCDC113-205ENST00000569374 PLCD3Q8N3E9 789 aa15.68■□□□□ 0.1
CCDC113-205ENST00000569374 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
CCDC113-205ENST00000569374 OSCARQ8IYS5 282 aa15.67■□□□□ 0.1
CCDC113-205ENST00000569374 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
CCDC113-205ENST00000569374 HAP1P54257 671 aaPredicted RBP15.64■□□□□ 0.09
CCDC113-205ENST00000569374 PABPN1Q86U42 306 aaKnown RBP eCLIP15.63■□□□□ 0.09
CCDC113-205ENST00000569374 ECM2O94769 699 aaPredicted RBP15.6■□□□□ 0.09
CCDC113-205ENST00000569374 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
CCDC113-205ENST00000569374 MIER1Q8N108 512 aa15.58■□□□□ 0.08
CCDC113-205ENST00000569374 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.56■□□□□ 0.08
CCDC113-205ENST00000569374 SCRIBQ14160 1630 aa15.56■□□□□ 0.08
CCDC113-205ENST00000569374 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
CCDC113-205ENST00000569374 ZBTB47Q9UFB7 747 aaPredicted RBP15.55■□□□□ 0.08
CCDC113-205ENST00000569374 BBXQ8WY36 941 aaPredicted RBP15.51■□□□□ 0.07
CCDC113-205ENST00000569374 VSIG10Q8N0Z9 540 aa15.47■□□□□ 0.07
CCDC113-205ENST00000569374 BCANQ96GW7 911 aa15.39■□□□□ 0.05
CCDC113-205ENST00000569374 TRIM41Q8WV44 630 aa15.35■□□□□ 0.05
CCDC113-205ENST00000569374 CIZ1Q9ULV3 898 aaPredicted RBP15.35■□□□□ 0.05
CCDC113-205ENST00000569374 RGL2O15211 777 aa15.33■□□□□ 0.04
CCDC113-205ENST00000569374 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
CCDC113-205ENST00000569374 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC113-205ENST00000569374 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
CCDC113-205ENST00000569374 CFAP44Q96MT7 982 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms