RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 USH2AO75445 5202 aa6.05□□□□□ -1.44
CHRFAM7A-206ENST00000569278 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
CHRFAM7A-206ENST00000569278 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
CHRFAM7A-206ENST00000569278 FAM236DA0A1B0GTK5 79 aa6.04□□□□□ -1.44
CHRFAM7A-206ENST00000569278 FAM236CP0DP71 79 aa6.04□□□□□ -1.44
CHRFAM7A-206ENST00000569278 PCOTHQ58A44 107 aa6.03□□□□□ -1.44
CHRFAM7A-206ENST00000569278 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
CHRFAM7A-206ENST00000569278 SPANXA2-OT1Q8N9U9 137 aa6.03□□□□□ -1.44
CHRFAM7A-206ENST00000569278 H0Y9P7 68 aa6.02□□□□□ -1.45
CHRFAM7A-206ENST00000569278 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
CHRFAM7A-206ENST00000569278 SERP1Q9Y6X1 66 aa6.01□□□□□ -1.45
CHRFAM7A-206ENST00000569278 LINC00208Q96KT6 92 aa6□□□□□ -1.45
CHRFAM7A-206ENST00000569278 CYSTM1Q9H1C7 97 aa6□□□□□ -1.45
CHRFAM7A-206ENST00000569278 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
CHRFAM7A-206ENST00000569278 NDUFS5O43920 106 aa5.99□□□□□ -1.45
CHRFAM7A-206ENST00000569278 C9orf92A6NGG3 77 aa5.97□□□□□ -1.45
CHRFAM7A-206ENST00000569278 CYP4F30PQ9H0H9 118 aa5.97□□□□□ -1.45
CHRFAM7A-206ENST00000569278 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
CHRFAM7A-206ENST00000569278 KRTAP16-1A8MUX0 517 aa5.91□□□□□ -1.46
CHRFAM7A-206ENST00000569278 SMIM26A0A096LP01 95 aa5.9□□□□□ -1.46
CHRFAM7A-206ENST00000569278 FCGBPQ9Y6R7 5405 aaPredicted RBP5.89□□□□□ -1.47
CHRFAM7A-206ENST00000569278 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
CHRFAM7A-206ENST00000569278 Q5W150 140 aa5.86□□□□□ -1.47
CHRFAM7A-206ENST00000569278 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
CHRFAM7A-206ENST00000569278 M0R2T5 61 aa5.85□□□□□ -1.47
CHRFAM7A-206ENST00000569278 A8MUU9 505 aa5.84□□□□□ -1.47
CHRFAM7A-206ENST00000569278 IGKV2-30P06310 120 aa5.83□□□□□ -1.48
CHRFAM7A-206ENST00000569278 V9GYY9 64 aa5.83□□□□□ -1.48
CHRFAM7A-206ENST00000569278 Q75L30 129 aa5.81□□□□□ -1.48
CHRFAM7A-206ENST00000569278 MACF1Q9UPN3 7388 aaKnown RBP5.8□□□□□ -1.48
CHRFAM7A-206ENST00000569278 ACYP2P14621 99 aa5.8□□□□□ -1.48
CHRFAM7A-206ENST00000569278 COX6B2Q6YFQ2 88 aa5.8□□□□□ -1.48
CHRFAM7A-206ENST00000569278 KRTAP9-8Q9BYQ0 159 aa5.8□□□□□ -1.48
CHRFAM7A-206ENST00000569278 SVIPQ8NHG7 77 aa5.79□□□□□ -1.48
CHRFAM7A-206ENST00000569278 SYNE2Q8WXH0 6885 aaKnown RBP5.78□□□□□ -1.48
CHRFAM7A-206ENST00000569278 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
CHRFAM7A-206ENST00000569278 A8MUN3 132 aa5.76□□□□□ -1.49
CHRFAM7A-206ENST00000569278 Q1T7F1 81 aa5.75□□□□□ -1.49
CHRFAM7A-206ENST00000569278 HRES1P13985 223 aa5.74□□□□□ -1.49
CHRFAM7A-206ENST00000569278 ATP11AUNQ6ZP68 121 aa5.73□□□□□ -1.49
CHRFAM7A-206ENST00000569278 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
CHRFAM7A-206ENST00000569278 COA5Q86WW8 74 aa5.71□□□□□ -1.5
CHRFAM7A-206ENST00000569278 IGKV2D-30A0A075B6S6 120 aa5.69□□□□□ -1.5
CHRFAM7A-206ENST00000569278 MT2AP02795 61 aa5.68□□□□□ -1.5
CHRFAM7A-206ENST00000569278 MT1FP04733 61 aa5.66□□□□□ -1.5
CHRFAM7A-206ENST00000569278 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
CHRFAM7A-206ENST00000569278 SPINK7P58062 85 aa5.65□□□□□ -1.5
CHRFAM7A-206ENST00000569278 SPTSSBQ8NFR3 76 aa5.64□□□□□ -1.51
CHRFAM7A-206ENST00000569278 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
CHRFAM7A-206ENST00000569278 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
CHRFAM7A-206ENST00000569278 MPLKIPQ8TAP9 179 aa5.61□□□□□ -1.51
CHRFAM7A-206ENST00000569278 C4orf26Q17RF5 130 aa5.6□□□□□ -1.51
CHRFAM7A-206ENST00000569278 PRR15LQ9BU68 103 aa5.57□□□□□ -1.52
CHRFAM7A-206ENST00000569278 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
CHRFAM7A-206ENST00000569278 KRTAP10-10P60014 251 aa5.49□□□□□ -1.53
CHRFAM7A-206ENST00000569278 SEC61GP60059 68 aa5.49□□□□□ -1.53
CHRFAM7A-206ENST00000569278 NEBP20929 6669 aa5.48□□□□□ -1.53
CHRFAM7A-206ENST00000569278 PSPHP1O15172 72 aa5.48□□□□□ -1.53
CHRFAM7A-206ENST00000569278 Q5VV11 94 aa5.47□□□□□ -1.53
CHRFAM7A-206ENST00000569278 A0A1B0GU69 56 aa5.46□□□□□ -1.54
CHRFAM7A-206ENST00000569278 PRO0628Q9UI54 55 aa5.46□□□□□ -1.54
CHRFAM7A-206ENST00000569278 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
CHRFAM7A-206ENST00000569278 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
CHRFAM7A-206ENST00000569278 LCE1AQ5T7P2 110 aa5.43□□□□□ -1.54
CHRFAM7A-206ENST00000569278 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
CHRFAM7A-206ENST00000569278 BRK1Q8WUW1 75 aa5.39□□□□□ -1.55
CHRFAM7A-206ENST00000569278 A6NED7 52 aa5.38□□□□□ -1.55
CHRFAM7A-206ENST00000569278 UQCR11O14957 56 aa5.38□□□□□ -1.55
CHRFAM7A-206ENST00000569278 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
CHRFAM7A-206ENST00000569278 A0A0A0MQY5 61 aa5.37□□□□□ -1.55
CHRFAM7A-206ENST00000569278 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
CHRFAM7A-206ENST00000569278 S4R3F8 94 aa5.34□□□□□ -1.55
CHRFAM7A-206ENST00000569278 SPATA8Q6RVD6 105 aa5.32□□□□□ -1.56
CHRFAM7A-206ENST00000569278 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
CHRFAM7A-206ENST00000569278 MIR22HGQ0VDD5 57 aa5.27□□□□□ -1.57
CHRFAM7A-206ENST00000569278 LCA10Q71F78 164 aa5.27□□□□□ -1.57
CHRFAM7A-206ENST00000569278 A0A1B0GU33 70 aa5.26□□□□□ -1.57
CHRFAM7A-206ENST00000569278 H0YAA0 97 aa5.24□□□□□ -1.57
CHRFAM7A-206ENST00000569278 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
CHRFAM7A-206ENST00000569278 PMAIP1Q13794 54 aa5.19□□□□□ -1.58
CHRFAM7A-206ENST00000569278 KMT2DO14686 5537 aa5.18□□□□□ -1.58
CHRFAM7A-206ENST00000569278 K7ERS5 55 aa5.14□□□□□ -1.59
CHRFAM7A-206ENST00000569278 M0QZ58 72 aa5.14□□□□□ -1.59
CHRFAM7A-206ENST00000569278 MT1BP07438 61 aa5.13□□□□□ -1.59
CHRFAM7A-206ENST00000569278 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
CHRFAM7A-206ENST00000569278 ADM2Q7Z4H4 148 aa5.08□□□□□ -1.6
CHRFAM7A-206ENST00000569278 A6NN06 94 aa5.07□□□□□ -1.6
CHRFAM7A-206ENST00000569278 KRTAP5-9P26371 169 aa5.07□□□□□ -1.6
CHRFAM7A-206ENST00000569278 A8MU10 97 aa5.06□□□□□ -1.6
CHRFAM7A-206ENST00000569278 P0C880 135 aa5.02□□□□□ -1.61
CHRFAM7A-206ENST00000569278 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
CHRFAM7A-206ENST00000569278 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
CHRFAM7A-206ENST00000569278 CRIPTQ9P021 101 aa5.02□□□□□ -1.61
CHRFAM7A-206ENST00000569278 KRTAP10-5P60370 271 aa5.01□□□□□ -1.61
CHRFAM7A-206ENST00000569278 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
CHRFAM7A-206ENST00000569278 SPRR2GQ9BYE4 73 aa4.99□□□□□ -1.61
CHRFAM7A-206ENST00000569278 R4GN34 69 aa4.96□□□□□ -1.62
CHRFAM7A-206ENST00000569278 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
CHRFAM7A-206ENST00000569278 A0A0D9SG42 100 aa4.87□□□□□ -1.63
CHRFAM7A-206ENST00000569278 KRTAP2-3P0C7H8 128 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms