RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 MRPL34Q9BQ48 92 aaKnown RBP4.66□□□□□ -1.66
CAPN3-219ENST00000569136 SPINK7P58062 85 aa4.65□□□□□ -1.67
CAPN3-219ENST00000569136 MMP24-AS1A0A0U1RRL7 71 aa4.64□□□□□ -1.67
CAPN3-219ENST00000569136 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
CAPN3-219ENST00000569136 K7EQZ3 153 aa4.64□□□□□ -1.67
CAPN3-219ENST00000569136 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
CAPN3-219ENST00000569136 HRES1P13985 223 aa4.63□□□□□ -1.67
CAPN3-219ENST00000569136 SERP2Q8N6R1 65 aa4.62□□□□□ -1.67
CAPN3-219ENST00000569136 LINC00846Q9NV44 126 aa4.62□□□□□ -1.67
CAPN3-219ENST00000569136 NDUFS5O43920 106 aa4.61□□□□□ -1.67
CAPN3-219ENST00000569136 ATP5EP2Q5VTU8 51 aa4.61□□□□□ -1.67
CAPN3-219ENST00000569136 CASC2Q6XLA1 102 aa4.6□□□□□ -1.67
CAPN3-219ENST00000569136 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
CAPN3-219ENST00000569136 CXCL6P80162 114 aa4.58□□□□□ -1.68
CAPN3-219ENST00000569136 Q8N9L7 120 aa4.57□□□□□ -1.68
CAPN3-219ENST00000569136 HCG22E2RYF7 251 aa4.56□□□□□ -1.68
CAPN3-219ENST00000569136 LCE1FQ5T754 118 aa4.56□□□□□ -1.68
CAPN3-219ENST00000569136 Q5W150 140 aa4.53□□□□□ -1.68
CAPN3-219ENST00000569136 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
CAPN3-219ENST00000569136 ATP5EP56381 51 aaPredicted RBP4.52□□□□□ -1.69
CAPN3-219ENST00000569136 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
CAPN3-219ENST00000569136 C7orf65Q6ZTY9 151 aa4.52□□□□□ -1.69
CAPN3-219ENST00000569136 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
CAPN3-219ENST00000569136 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
CAPN3-219ENST00000569136 NDUFC1O43677 76 aa4.5□□□□□ -1.69
CAPN3-219ENST00000569136 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
CAPN3-219ENST00000569136 TRAV7A0A075B6U4 112 aa4.49□□□□□ -1.69
CAPN3-219ENST00000569136 FSIP2Q5CZC0 6907 aa4.49□□□□□ -1.69
CAPN3-219ENST00000569136 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
CAPN3-219ENST00000569136 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
CAPN3-219ENST00000569136 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
CAPN3-219ENST00000569136 C4orf26Q17RF5 130 aa4.47□□□□□ -1.69
CAPN3-219ENST00000569136 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.7
CAPN3-219ENST00000569136 CRCT1Q9UGL9 99 aa4.46□□□□□ -1.7
CAPN3-219ENST00000569136 KRTAP10-10P60014 251 aa4.44□□□□□ -1.7
CAPN3-219ENST00000569136 A0A087WVE0 104 aa4.43□□□□□ -1.7
CAPN3-219ENST00000569136 MT2AP02795 61 aa4.43□□□□□ -1.7
CAPN3-219ENST00000569136 C20orf197Q8N268 126 aa4.43□□□□□ -1.7
CAPN3-219ENST00000569136 H7BZZ5 65 aa4.42□□□□□ -1.7
CAPN3-219ENST00000569136 KRTAP10-5P60370 271 aa4.41□□□□□ -1.7
CAPN3-219ENST00000569136 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
CAPN3-219ENST00000569136 MT1FP04733 61 aa4.39□□□□□ -1.71
CAPN3-219ENST00000569136 CYP4F30PQ9H0H9 118 aa4.39□□□□□ -1.71
CAPN3-219ENST00000569136 LOC101927531A0A1B0GV80 90 aa4.38□□□□□ -1.71
CAPN3-219ENST00000569136 C1orf64Q8NEQ6 169 aa4.38□□□□□ -1.71
CAPN3-219ENST00000569136 TRAV22A0A0B4J277 110 aa4.37□□□□□ -1.71
CAPN3-219ENST00000569136 V9GYY9 64 aa4.36□□□□□ -1.71
CAPN3-219ENST00000569136 CSAG1Q6PB30 78 aa4.35□□□□□ -1.71
CAPN3-219ENST00000569136 OCR1Q9BZK8 76 aa4.35□□□□□ -1.71
CAPN3-219ENST00000569136 SEC61GP60059 68 aa4.32□□□□□ -1.72
CAPN3-219ENST00000569136 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
CAPN3-219ENST00000569136 S4R3F8 94 aa4.32□□□□□ -1.72
CAPN3-219ENST00000569136 H0Y9P7 68 aa4.31□□□□□ -1.72
CAPN3-219ENST00000569136 MP68P56378 58 aa4.31□□□□□ -1.72
CAPN3-219ENST00000569136 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
CAPN3-219ENST00000569136 SNURFQ9Y675 71 aa4.3□□□□□ -1.72
CAPN3-219ENST00000569136 Q1T7F1 81 aa4.28□□□□□ -1.72
CAPN3-219ENST00000569136 USH2AO75445 5202 aa4.28□□□□□ -1.72
CAPN3-219ENST00000569136 H3BPC8 53 aa4.27□□□□□ -1.73
CAPN3-219ENST00000569136 LCA10Q71F78 164 aa4.27□□□□□ -1.73
CAPN3-219ENST00000569136 LINC00208Q96KT6 92 aa4.27□□□□□ -1.73
CAPN3-219ENST00000569136 A8MUN3 132 aa4.26□□□□□ -1.73
CAPN3-219ENST00000569136 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
CAPN3-219ENST00000569136 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
CAPN3-219ENST00000569136 CRIPTQ9P021 101 aa4.19□□□□□ -1.74
CAPN3-219ENST00000569136 KRTAP19-6Q3LI70 58 aa4.18□□□□□ -1.74
CAPN3-219ENST00000569136 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.18□□□□□ -1.74
CAPN3-219ENST00000569136 H0YAA0 97 aa4.16□□□□□ -1.74
CAPN3-219ENST00000569136 FCGBPQ9Y6R7 5405 aaPredicted RBP4.15□□□□□ -1.75
CAPN3-219ENST00000569136 SPANXA2-OT1Q8N9U9 137 aa4.15□□□□□ -1.75
CAPN3-219ENST00000569136 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
CAPN3-219ENST00000569136 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
CAPN3-219ENST00000569136 KRTAP19-8Q3LI54 63 aa4.11□□□□□ -1.75
CAPN3-219ENST00000569136 Q5VV11 94 aa4.11□□□□□ -1.75
CAPN3-219ENST00000569136 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
CAPN3-219ENST00000569136 PSPHP1O15172 72 aa4.09□□□□□ -1.75
CAPN3-219ENST00000569136 ACYP2P14621 99 aa4.09□□□□□ -1.75
CAPN3-219ENST00000569136 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
CAPN3-219ENST00000569136 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
CAPN3-219ENST00000569136 CHKB-CPT1BH3BT56 60 aa4.06□□□□□ -1.76
CAPN3-219ENST00000569136 A8MU10 97 aa4.05□□□□□ -1.76
CAPN3-219ENST00000569136 MT1BP07438 61 aa4.05□□□□□ -1.76
CAPN3-219ENST00000569136 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
CAPN3-219ENST00000569136 PRR15LQ9BU68 103 aa4.03□□□□□ -1.76
CAPN3-219ENST00000569136 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
CAPN3-219ENST00000569136 A6NN06 94 aa4.02□□□□□ -1.77
CAPN3-219ENST00000569136 A6NED7 52 aa4.01□□□□□ -1.77
CAPN3-219ENST00000569136 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
CAPN3-219ENST00000569136 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
CAPN3-219ENST00000569136 R4GN34 69 aa3.99□□□□□ -1.77
CAPN3-219ENST00000569136 COA5Q86WW8 74 aa3.98□□□□□ -1.77
CAPN3-219ENST00000569136 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
CAPN3-219ENST00000569136 PLAC4Q8WY50 150 aa3.97□□□□□ -1.77
CAPN3-219ENST00000569136 P0C880 135 aa3.96□□□□□ -1.78
CAPN3-219ENST00000569136 M0QZ58 72 aa3.94□□□□□ -1.78
CAPN3-219ENST00000569136 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
CAPN3-219ENST00000569136 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
CAPN3-219ENST00000569136 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
CAPN3-219ENST00000569136 KRTAP12-2P59991 146 aa3.9□□□□□ -1.79
CAPN3-219ENST00000569136 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms