RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 PRR15Q8IV56 129 aa4.26□□□□□ -1.73
CDH11-216ENST00000569128 NDUFB1O75438 58 aa4.24□□□□□ -1.73
CDH11-216ENST00000569128 MT-ATP8P03928 68 aa4.24□□□□□ -1.73
CDH11-216ENST00000569128 HMCN2Q8NDA2 5059 aa4.24□□□□□ -1.73
CDH11-216ENST00000569128 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
CDH11-216ENST00000569128 A0A087WVE0 104 aa4.22□□□□□ -1.73
CDH11-216ENST00000569128 HIST1H4AP62805 103 aaKnown RBP4.22□□□□□ -1.73
CDH11-216ENST00000569128 TPRXLQ17RH7 258 aa4.22□□□□□ -1.73
CDH11-216ENST00000569128 SPINT4Q6UDR6 99 aa4.22□□□□□ -1.73
CDH11-216ENST00000569128 WFDC13Q8IUB5 93 aa4.22□□□□□ -1.73
CDH11-216ENST00000569128 ATP5EP2Q5VTU8 51 aa4.21□□□□□ -1.74
CDH11-216ENST00000569128 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
CDH11-216ENST00000569128 hDV103S1A0JD37 113 aa4.19□□□□□ -1.74
CDH11-216ENST00000569128 LRP2P98164 4655 aa4.19□□□□□ -1.74
CDH11-216ENST00000569128 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
CDH11-216ENST00000569128 CASC2Q6XLA1 102 aa4.18□□□□□ -1.74
CDH11-216ENST00000569128 TMEM254Q8TBM7 123 aa4.17□□□□□ -1.74
CDH11-216ENST00000569128 C20orf166-AS1Q96NR2 134 aa4.17□□□□□ -1.74
CDH11-216ENST00000569128 MRPL34Q9BQ48 92 aaKnown RBP4.17□□□□□ -1.74
CDH11-216ENST00000569128 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
CDH11-216ENST00000569128 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
CDH11-216ENST00000569128 RPL37P61927 97 aaKnown RBP4.15□□□□□ -1.75
CDH11-216ENST00000569128 A0A1B0GU33 70 aa4.13□□□□□ -1.75
CDH11-216ENST00000569128 PCOTHQ58A44 107 aa4.13□□□□□ -1.75
CDH11-216ENST00000569128 IMUPQ9GZP8 106 aa4.13□□□□□ -1.75
CDH11-216ENST00000569128 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
CDH11-216ENST00000569128 KRTAP4-1Q9BYQ7 146 aa4.11□□□□□ -1.75
CDH11-216ENST00000569128 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
CDH11-216ENST00000569128 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
CDH11-216ENST00000569128 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
CDH11-216ENST00000569128 KRTAP25-1Q3LHN0 102 aa4.09□□□□□ -1.75
CDH11-216ENST00000569128 ATP11AUNQ6ZP68 121 aa4.09□□□□□ -1.75
CDH11-216ENST00000569128 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
CDH11-216ENST00000569128 SCGB1A1P11684 91 aa4.07□□□□□ -1.76
CDH11-216ENST00000569128 R4GN34 69 aa4.07□□□□□ -1.76
CDH11-216ENST00000569128 H3BPC8 53 aa4.06□□□□□ -1.76
CDH11-216ENST00000569128 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
CDH11-216ENST00000569128 TP53AIP1Q9HCN2 124 aa4.05□□□□□ -1.76
CDH11-216ENST00000569128 UQCRQO14949 82 aa4.04□□□□□ -1.76
CDH11-216ENST00000569128 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
CDH11-216ENST00000569128 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
CDH11-216ENST00000569128 H0Y9P7 68 aa4.03□□□□□ -1.76
CDH11-216ENST00000569128 LCA10Q71F78 164 aa4.03□□□□□ -1.76
CDH11-216ENST00000569128 ATOX1O00244 68 aa4.02□□□□□ -1.77
CDH11-216ENST00000569128 SPINK7P58062 85 aa4.02□□□□□ -1.77
CDH11-216ENST00000569128 TRAV7A0A075B6U4 112 aa4.01□□□□□ -1.77
CDH11-216ENST00000569128 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
CDH11-216ENST00000569128 KRTAP4-4Q9BYR3 166 aa4.01□□□□□ -1.77
CDH11-216ENST00000569128 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
CDH11-216ENST00000569128 HRES1P13985 223 aa3.99□□□□□ -1.77
CDH11-216ENST00000569128 LINC00208Q96KT6 92 aa3.99□□□□□ -1.77
CDH11-216ENST00000569128 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
CDH11-216ENST00000569128 MUC2Q02817 5179 aa3.97□□□□□ -1.77
CDH11-216ENST00000569128 LINC01554Q52M75 96 aa3.97□□□□□ -1.77
CDH11-216ENST00000569128 C7orf65Q6ZTY9 151 aa3.97□□□□□ -1.77
CDH11-216ENST00000569128 CYP4F30PQ9H0H9 118 aa3.97□□□□□ -1.77
CDH11-216ENST00000569128 KLKP1Q107X0 134 aa3.96□□□□□ -1.78
CDH11-216ENST00000569128 LOC101927531A0A1B0GV80 90 aa3.95□□□□□ -1.78
CDH11-216ENST00000569128 KRTAP19-2Q3LHN2 52 aa3.95□□□□□ -1.78
CDH11-216ENST00000569128 SNURFQ9Y675 71 aa3.95□□□□□ -1.78
CDH11-216ENST00000569128 COX7CP15954 63 aa3.94□□□□□ -1.78
CDH11-216ENST00000569128 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
CDH11-216ENST00000569128 CCDC179H3BU77 68 aa3.91□□□□□ -1.78
CDH11-216ENST00000569128 CYSTM1Q9H1C7 97 aa3.91□□□□□ -1.78
CDH11-216ENST00000569128 RPS28P62857 69 aaKnown RBP3.89□□□□□ -1.79
CDH11-216ENST00000569128 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
CDH11-216ENST00000569128 FAT4Q6V0I7 4981 aa3.86□□□□□ -1.79
CDH11-216ENST00000569128 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.8
CDH11-216ENST00000569128 H7BZZ5 65 aa3.83□□□□□ -1.8
CDH11-216ENST00000569128 MT1HP80294 61 aa3.83□□□□□ -1.8
CDH11-216ENST00000569128 H1FX-AS1Q4G0G2 97 aa3.83□□□□□ -1.8
CDH11-216ENST00000569128 DMAC1Q96GE9 116 aa3.79□□□□□ -1.8
CDH11-216ENST00000569128 NDUFC1O43677 76 aa3.78□□□□□ -1.8
CDH11-216ENST00000569128 S4R3F8 94 aa3.76□□□□□ -1.81
CDH11-216ENST00000569128 M0R2T5 61 aa3.75□□□□□ -1.81
CDH11-216ENST00000569128 ACYP2P14621 99 aa3.74□□□□□ -1.81
CDH11-216ENST00000569128 TMEM258P61165 79 aa3.74□□□□□ -1.81
CDH11-216ENST00000569128 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
CDH11-216ENST00000569128 COA5Q86WW8 74 aa3.7□□□□□ -1.82
CDH11-216ENST00000569128 CSAG1Q6PB30 78 aa3.69□□□□□ -1.82
CDH11-216ENST00000569128 SPRR5A0A1B0GTR4 108 aa3.68□□□□□ -1.82
CDH11-216ENST00000569128 CHKB-CPT1BH3BT56 60 aa3.68□□□□□ -1.82
CDH11-216ENST00000569128 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
CDH11-216ENST00000569128 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
CDH11-216ENST00000569128 MT2AP02795 61 aa3.65□□□□□ -1.83
CDH11-216ENST00000569128 P0C880 135 aa3.64□□□□□ -1.83
CDH11-216ENST00000569128 MT1FP04733 61 aa3.63□□□□□ -1.83
CDH11-216ENST00000569128 LCE3DQ9BYE3 92 aa3.62□□□□□ -1.83
CDH11-216ENST00000569128 KRTAP10-10P60014 251 aa3.6□□□□□ -1.83
CDH11-216ENST00000569128 SPTSSBQ8NFR3 76 aa3.6□□□□□ -1.83
CDH11-216ENST00000569128 SERP1Q9Y6X1 66 aa3.6□□□□□ -1.83
CDH11-216ENST00000569128 BRK1Q8WUW1 75 aa3.59□□□□□ -1.83
CDH11-216ENST00000569128 H0YAA0 97 aa3.57□□□□□ -1.84
CDH11-216ENST00000569128 OBSCNQ5VST9 7968 aa3.56□□□□□ -1.84
CDH11-216ENST00000569128 ROMO1P60602 79 aa3.55□□□□□ -1.84
CDH11-216ENST00000569128 KRTAP5-2Q701N4 177 aa3.51□□□□□ -1.85
CDH11-216ENST00000569128 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
CDH11-216ENST00000569128 Q1T7F1 81 aa3.49□□□□□ -1.85
CDH11-216ENST00000569128 A0A1B0GU69 56 aa3.48□□□□□ -1.85
CDH11-216ENST00000569128 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms