RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 MP68P56378 58 aa5.34□□□□□ -1.55
CDH3-210ENST00000569117 H3BPC8 53 aa5.33□□□□□ -1.56
CDH3-210ENST00000569117 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
CDH3-210ENST00000569117 SERP2Q8N6R1 65 aa5.32□□□□□ -1.56
CDH3-210ENST00000569117 C1orf64Q8NEQ6 169 aa5.32□□□□□ -1.56
CDH3-210ENST00000569117 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
CDH3-210ENST00000569117 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
CDH3-210ENST00000569117 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
CDH3-210ENST00000569117 RBM12B-AS1Q9P1G2 102 aa5.29□□□□□ -1.56
CDH3-210ENST00000569117 NDUFAF8A1L188 74 aa5.25□□□□□ -1.57
CDH3-210ENST00000569117 COX7CP15954 63 aa5.25□□□□□ -1.57
CDH3-210ENST00000569117 COX6B2Q6YFQ2 88 aa5.25□□□□□ -1.57
CDH3-210ENST00000569117 KRTAP4-9Q9BYQ8 210 aa5.25□□□□□ -1.57
CDH3-210ENST00000569117 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
CDH3-210ENST00000569117 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
CDH3-210ENST00000569117 KLKP1Q107X0 134 aa5.24□□□□□ -1.57
CDH3-210ENST00000569117 C4orf26Q17RF5 130 aa5.24□□□□□ -1.57
CDH3-210ENST00000569117 ANAPC13Q9BS18 74 aa5.24□□□□□ -1.57
CDH3-210ENST00000569117 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
CDH3-210ENST00000569117 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.57
CDH3-210ENST00000569117 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
CDH3-210ENST00000569117 KRTAP4-2Q9BYR5 136 aa5.2□□□□□ -1.58
CDH3-210ENST00000569117 MT1HP80294 61 aa5.17□□□□□ -1.58
CDH3-210ENST00000569117 H1FX-AS1Q4G0G2 97 aa5.17□□□□□ -1.58
CDH3-210ENST00000569117 FLGP20930 4061 aaPredicted RBP5.16□□□□□ -1.58
CDH3-210ENST00000569117 A8MUN3 132 aa5.15□□□□□ -1.59
CDH3-210ENST00000569117 NDUFC1O43677 76 aa5.13□□□□□ -1.59
CDH3-210ENST00000569117 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
CDH3-210ENST00000569117 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
CDH3-210ENST00000569117 SPANXA2-OT1Q8N9U9 137 aa5.12□□□□□ -1.59
CDH3-210ENST00000569117 CYSTM1Q9H1C7 97 aa5.12□□□□□ -1.59
CDH3-210ENST00000569117 H7BZZ5 65 aa5.1□□□□□ -1.59
CDH3-210ENST00000569117 S4R3F8 94 aa5.08□□□□□ -1.6
CDH3-210ENST00000569117 M0R2T5 61 aa5.07□□□□□ -1.6
CDH3-210ENST00000569117 LCA10Q71F78 164 aa5.05□□□□□ -1.6
CDH3-210ENST00000569117 ACYP2P14621 99 aa5.03□□□□□ -1.6
CDH3-210ENST00000569117 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
CDH3-210ENST00000569117 KRTAP4-11Q9BYQ6 195 aa5.02□□□□□ -1.61
CDH3-210ENST00000569117 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
CDH3-210ENST00000569117 ATP5EP56381 51 aaPredicted RBP4.99□□□□□ -1.61
CDH3-210ENST00000569117 TMEM258P61165 79 aa4.98□□□□□ -1.61
CDH3-210ENST00000569117 CSAG1Q6PB30 78 aa4.98□□□□□ -1.61
CDH3-210ENST00000569117 V9GYY9 64 aa4.98□□□□□ -1.61
CDH3-210ENST00000569117 COA5Q86WW8 74 aa4.95□□□□□ -1.62
CDH3-210ENST00000569117 CHKB-CPT1BH3BT56 60 aa4.94□□□□□ -1.62
CDH3-210ENST00000569117 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
CDH3-210ENST00000569117 MT2AP02795 61 aa4.91□□□□□ -1.62
CDH3-210ENST00000569117 SPTSSBQ8NFR3 76 aa4.91□□□□□ -1.62
CDH3-210ENST00000569117 H0YAA0 97 aa4.89□□□□□ -1.63
CDH3-210ENST00000569117 MT1FP04733 61 aa4.88□□□□□ -1.63
CDH3-210ENST00000569117 MT3P25713 68 aa4.85□□□□□ -1.63
CDH3-210ENST00000569117 KRTAP10-10P60014 251 aa4.84□□□□□ -1.63
CDH3-210ENST00000569117 KRTAP5-3Q6L8H2 238 aa4.83□□□□□ -1.64
CDH3-210ENST00000569117 ADM2Q7Z4H4 148 aa4.81□□□□□ -1.64
CDH3-210ENST00000569117 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
CDH3-210ENST00000569117 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
CDH3-210ENST00000569117 SMIM26A0A096LP01 95 aa4.75□□□□□ -1.65
CDH3-210ENST00000569117 P0C880 135 aa4.75□□□□□ -1.65
CDH3-210ENST00000569117 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
CDH3-210ENST00000569117 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
CDH3-210ENST00000569117 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
CDH3-210ENST00000569117 A0A1B0GU69 56 aa4.67□□□□□ -1.66
CDH3-210ENST00000569117 LINC01558Q9Y6Z2 57 aa4.67□□□□□ -1.66
CDH3-210ENST00000569117 R4GN34 69 aa4.67□□□□□ -1.66
CDH3-210ENST00000569117 M0QZ58 72 aa4.64□□□□□ -1.67
CDH3-210ENST00000569117 PSPHP1O15172 72 aa4.64□□□□□ -1.67
CDH3-210ENST00000569117 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
CDH3-210ENST00000569117 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
CDH3-210ENST00000569117 Q1T7F1 81 aa4.61□□□□□ -1.67
CDH3-210ENST00000569117 A0A1B0GU33 70 aa4.6□□□□□ -1.67
CDH3-210ENST00000569117 KRTAP13-4Q3LI77 160 aa4.59□□□□□ -1.67
CDH3-210ENST00000569117 Q5VV11 94 aa4.59□□□□□ -1.67
CDH3-210ENST00000569117 USH2AO75445 5202 aa4.58□□□□□ -1.68
CDH3-210ENST00000569117 MT1BP07438 61 aa4.57□□□□□ -1.68
CDH3-210ENST00000569117 PRO0628Q9UI54 55 aa4.56□□□□□ -1.68
CDH3-210ENST00000569117 LINC01554Q52M75 96 aa4.54□□□□□ -1.68
CDH3-210ENST00000569117 KRTAP2-2Q9BYT5 123 aa4.54□□□□□ -1.68
CDH3-210ENST00000569117 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
CDH3-210ENST00000569117 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
CDH3-210ENST00000569117 A6NN06 94 aa4.51□□□□□ -1.69
CDH3-210ENST00000569117 UQCR11O14957 56 aa4.49□□□□□ -1.69
CDH3-210ENST00000569117 LCE1FQ5T754 118 aa4.49□□□□□ -1.69
CDH3-210ENST00000569117 CRCT1Q9UGL9 99 aa4.48□□□□□ -1.69
CDH3-210ENST00000569117 SSPOA2VEC9 5147 aa4.46□□□□□ -1.69
CDH3-210ENST00000569117 A0A0D9SG42 100 aa4.46□□□□□ -1.7
CDH3-210ENST00000569117 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
CDH3-210ENST00000569117 PLAC4Q8WY50 150 aa4.46□□□□□ -1.7
CDH3-210ENST00000569117 A8MU10 97 aa4.43□□□□□ -1.7
CDH3-210ENST00000569117 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
CDH3-210ENST00000569117 A6NED7 52 aa4.4□□□□□ -1.71
CDH3-210ENST00000569117 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
CDH3-210ENST00000569117 KRTAP10-5P60370 271 aa4.4□□□□□ -1.71
CDH3-210ENST00000569117 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
CDH3-210ENST00000569117 KRTAP12-2P59991 146 aa4.37□□□□□ -1.71
CDH3-210ENST00000569117 MT1XP80297 61 aa4.37□□□□□ -1.71
CDH3-210ENST00000569117 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
CDH3-210ENST00000569117 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
CDH3-210ENST00000569117 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.72
CDH3-210ENST00000569117 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
CDH3-210ENST00000569117 K7ERS5 55 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms