RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
CDH3-208ENST00000569036 NDUFS5O43920 106 aa6□□□□□ -1.45
CDH3-208ENST00000569036 PRLHP81277 87 aa6□□□□□ -1.45
CDH3-208ENST00000569036 A8MUN3 132 aa5.99□□□□□ -1.45
CDH3-208ENST00000569036 PSPHP1O15172 72 aa5.99□□□□□ -1.45
CDH3-208ENST00000569036 KRTAP19-6Q3LI70 58 aa5.99□□□□□ -1.45
CDH3-208ENST00000569036 MMP24-AS1A0A0U1RRL7 71 aa5.97□□□□□ -1.45
CDH3-208ENST00000569036 KTN1-AS1Q86SY8 53 aa5.97□□□□□ -1.45
CDH3-208ENST00000569036 CHKB-CPT1BH3BT56 60 aa5.96□□□□□ -1.46
CDH3-208ENST00000569036 LINC01558Q9Y6Z2 57 aa5.96□□□□□ -1.46
CDH3-208ENST00000569036 COA5Q86WW8 74 aa5.95□□□□□ -1.46
CDH3-208ENST00000569036 PRR15LQ9BU68 103 aa5.95□□□□□ -1.46
CDH3-208ENST00000569036 CDC42SE1Q9NRR8 79 aa5.95□□□□□ -1.46
CDH3-208ENST00000569036 RPS29P62273 56 aaKnown RBP5.94□□□□□ -1.46
CDH3-208ENST00000569036 MT2AP02795 61 aa5.93□□□□□ -1.46
CDH3-208ENST00000569036 ZNF706Q9Y5V0 76 aaPredicted RBP5.93□□□□□ -1.46
CDH3-208ENST00000569036 KRTAP9-3Q9BYQ3 159 aa5.92□□□□□ -1.46
CDH3-208ENST00000569036 C9orf92A6NGG3 77 aa5.91□□□□□ -1.46
CDH3-208ENST00000569036 LINC00483Q53H64 154 aa5.9□□□□□ -1.46
CDH3-208ENST00000569036 A6NED7 52 aa5.89□□□□□ -1.47
CDH3-208ENST00000569036 MT1FP04733 61 aa5.89□□□□□ -1.47
CDH3-208ENST00000569036 C8orf17Q9NRJ1 99 aa5.89□□□□□ -1.47
CDH3-208ENST00000569036 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
CDH3-208ENST00000569036 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
CDH3-208ENST00000569036 A6NN06 94 aa5.86□□□□□ -1.47
CDH3-208ENST00000569036 Q96NJ1 140 aa5.86□□□□□ -1.47
CDH3-208ENST00000569036 MRPL34Q9BQ48 92 aaKnown RBP5.85□□□□□ -1.47
CDH3-208ENST00000569036 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
CDH3-208ENST00000569036 LCA10Q71F78 164 aa5.83□□□□□ -1.48
CDH3-208ENST00000569036 A0A0G2JQZ4 141 aa5.82□□□□□ -1.48
CDH3-208ENST00000569036 C8orf87E5RJ46 101 aa5.81□□□□□ -1.48
CDH3-208ENST00000569036 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
CDH3-208ENST00000569036 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
CDH3-208ENST00000569036 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
CDH3-208ENST00000569036 KMT2DO14686 5537 aa5.79□□□□□ -1.48
CDH3-208ENST00000569036 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
CDH3-208ENST00000569036 SPTSSBQ8NFR3 76 aa5.79□□□□□ -1.48
CDH3-208ENST00000569036 HRES1P13985 223 aa5.78□□□□□ -1.48
CDH3-208ENST00000569036 ACYP2P14621 99 aa5.78□□□□□ -1.48
CDH3-208ENST00000569036 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
CDH3-208ENST00000569036 RBM12B-AS1Q9P1G2 102 aa5.77□□□□□ -1.49
CDH3-208ENST00000569036 IGHV6-1A0A0B4J1U7 121 aa5.74□□□□□ -1.49
CDH3-208ENST00000569036 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
CDH3-208ENST00000569036 DMAC1Q96GE9 116 aa5.73□□□□□ -1.49
CDH3-208ENST00000569036 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
CDH3-208ENST00000569036 A8MU10 97 aa5.72□□□□□ -1.49
CDH3-208ENST00000569036 SPINK7P58062 85 aa5.68□□□□□ -1.5
CDH3-208ENST00000569036 GPR98Q8WXG9 6306 aa5.66□□□□□ -1.5
CDH3-208ENST00000569036 SPATA8Q6RVD6 105 aa5.66□□□□□ -1.5
CDH3-208ENST00000569036 A0A1B0GU69 56 aa5.63□□□□□ -1.51
CDH3-208ENST00000569036 UQCR11O14957 56 aa5.62□□□□□ -1.51
CDH3-208ENST00000569036 IGKV2-30P06310 120 aa5.62□□□□□ -1.51
CDH3-208ENST00000569036 Q5W150 140 aa5.61□□□□□ -1.51
CDH3-208ENST00000569036 KRTAP5-9P26371 169 aa5.6□□□□□ -1.51
CDH3-208ENST00000569036 LINC00313P59037 77 aa5.6□□□□□ -1.51
CDH3-208ENST00000569036 NOTCH2NLQ7Z3S9 236 aa5.58□□□□□ -1.52
CDH3-208ENST00000569036 C20orf166-AS1Q96NR2 134 aa5.58□□□□□ -1.52
CDH3-208ENST00000569036 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
CDH3-208ENST00000569036 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
CDH3-208ENST00000569036 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
CDH3-208ENST00000569036 IGKV2D-30A0A075B6S6 120 aa5.52□□□□□ -1.53
CDH3-208ENST00000569036 LINC01554Q52M75 96 aa5.52□□□□□ -1.53
CDH3-208ENST00000569036 KRTAP16-1A8MUX0 517 aa5.5□□□□□ -1.53
CDH3-208ENST00000569036 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
CDH3-208ENST00000569036 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
CDH3-208ENST00000569036 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
CDH3-208ENST00000569036 SPRR2EP22531 72 aa5.36□□□□□ -1.55
CDH3-208ENST00000569036 SPRR2BP35325 72 aa5.36□□□□□ -1.55
CDH3-208ENST00000569036 SPRR2AP35326 72 aa5.36□□□□□ -1.55
CDH3-208ENST00000569036 ADM2Q7Z4H4 148 aa5.33□□□□□ -1.56
CDH3-208ENST00000569036 A8MUU9 505 aa5.32□□□□□ -1.56
CDH3-208ENST00000569036 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
CDH3-208ENST00000569036 K7ERS5 55 aa5.3□□□□□ -1.56
CDH3-208ENST00000569036 A0A1B0GU33 70 aa5.27□□□□□ -1.57
CDH3-208ENST00000569036 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
CDH3-208ENST00000569036 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
CDH3-208ENST00000569036 H0YAA0 97 aa5.25□□□□□ -1.57
CDH3-208ENST00000569036 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
CDH3-208ENST00000569036 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
CDH3-208ENST00000569036 MT1BP07438 61 aa5.19□□□□□ -1.58
CDH3-208ENST00000569036 SPRR2DP22532 72 aa5.19□□□□□ -1.58
CDH3-208ENST00000569036 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
CDH3-208ENST00000569036 H3BS24 57 aa5.15□□□□□ -1.59
CDH3-208ENST00000569036 ROMO1P60602 79 aa5.15□□□□□ -1.59
CDH3-208ENST00000569036 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
CDH3-208ENST00000569036 LCE3BQ5TA77 95 aa5.11□□□□□ -1.59
CDH3-208ENST00000569036 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
CDH3-208ENST00000569036 KRTAP19-8Q3LI54 63 aa5.04□□□□□ -1.6
CDH3-208ENST00000569036 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
CDH3-208ENST00000569036 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
CDH3-208ENST00000569036 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
CDH3-208ENST00000569036 S4R3F8 94 aa4.94□□□□□ -1.62
CDH3-208ENST00000569036 SPRR2GQ9BYE4 73 aa4.93□□□□□ -1.62
CDH3-208ENST00000569036 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
CDH3-208ENST00000569036 CRIPTQ9P021 101 aa4.91□□□□□ -1.62
CDH3-208ENST00000569036 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
CDH3-208ENST00000569036 M0QZ58 72 aa4.87□□□□□ -1.63
CDH3-208ENST00000569036 P0C880 135 aa4.87□□□□□ -1.63
CDH3-208ENST00000569036 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
CDH3-208ENST00000569036 KRTAP13-4Q3LI77 160 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms