RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782		A0A1B0GV90	55 aa		4.76	□□□□□ -1.65
UBR1-207	ENST00000568782		A0A087WVE0	104 aa		4.75	□□□□□ -1.65
UBR1-207	ENST00000568782	NDUFC1	O43677	76 aa		4.75	□□□□□ -1.65
UBR1-207	ENST00000568782	SSPO	A2VEC9	5147 aa		4.75	□□□□□ -1.65
UBR1-207	ENST00000568782		A8MUN3	132 aa		4.74	□□□□□ -1.65
UBR1-207	ENST00000568782	LINC00208	Q96KT6	92 aa		4.74	□□□□□ -1.65
UBR1-207	ENST00000568782	IMUP	Q9GZP8	106 aa		4.74	□□□□□ -1.65
UBR1-207	ENST00000568782	SCGB1A1	P11684	91 aa		4.73	□□□□□ -1.65
UBR1-207	ENST00000568782	KLKP1	Q107X0	134 aa		4.72	□□□□□ -1.65
UBR1-207	ENST00000568782		Q5VV11	94 aa		4.71	□□□□□ -1.66
UBR1-207	ENST00000568782	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.7	□□□□□ -1.66
UBR1-207	ENST00000568782	CRIPT	Q9P021	101 aa		4.7	□□□□□ -1.66
UBR1-207	ENST00000568782		H3BPC8	53 aa		4.68	□□□□□ -1.66
UBR1-207	ENST00000568782	SPRR2G	Q9BYE4	73 aa		4.67	□□□□□ -1.66
UBR1-207	ENST00000568782	OCR1	Q9BZK8	76 aa		4.67	□□□□□ -1.66
UBR1-207	ENST00000568782		A6NN06	94 aa		4.65	□□□□□ -1.67
UBR1-207	ENST00000568782		H0YAA0	97 aa		4.63	□□□□□ -1.67
UBR1-207	ENST00000568782	KRTAP19-8	Q3LI54	63 aa		4.62	□□□□□ -1.67
UBR1-207	ENST00000568782	ADM2	Q7Z4H4	148 aa		4.6	□□□□□ -1.67
UBR1-207	ENST00000568782		K7ERU9	68 aa		4.59	□□□□□ -1.67
UBR1-207	ENST00000568782	MT1B	P07438	61 aa		4.59	□□□□□ -1.67
UBR1-207	ENST00000568782	C20orf197	Q8N268	126 aa		4.59	□□□□□ -1.67
UBR1-207	ENST00000568782	SMIM20	Q8N5G0	67 aa		4.58	□□□□□ -1.68
UBR1-207	ENST00000568782	DMAC1	Q96GE9	116 aa		4.55	□□□□□ -1.68
UBR1-207	ENST00000568782	MACF1	Q9UPN3	7388 aa	Known RBP	4.54	□□□□□ -1.68
UBR1-207	ENST00000568782	KRTAP6-3	Q3LI67	103 aa		4.54	□□□□□ -1.68
UBR1-207	ENST00000568782		R4GN34	69 aa		4.54	□□□□□ -1.68
UBR1-207	ENST00000568782	ACYP2	P14621	99 aa		4.53	□□□□□ -1.68
UBR1-207	ENST00000568782	KRTAP10-5	P60370	271 aa		4.52	□□□□□ -1.69
UBR1-207	ENST00000568782	SPTSSB	Q8NFR3	76 aa		4.52	□□□□□ -1.69
UBR1-207	ENST00000568782	PLAC4	Q8WY50	150 aa		4.52	□□□□□ -1.69
UBR1-207	ENST00000568782	TRAV7	A0A075B6U4	112 aa		4.51	□□□□□ -1.69
UBR1-207	ENST00000568782	MT-ATP8	P03928	68 aa		4.5	□□□□□ -1.69
UBR1-207	ENST00000568782	PRO2289	Q9P1D8	64 aa		4.5	□□□□□ -1.69
UBR1-207	ENST00000568782	CHKB-CPT1B	H3BT56	60 aa		4.48	□□□□□ -1.69
UBR1-207	ENST00000568782	PCP4	P48539	62 aa		4.48	□□□□□ -1.69
UBR1-207	ENST00000568782		M0QZ58	72 aa		4.47	□□□□□ -1.69
UBR1-207	ENST00000568782	SYNE2	Q8WXH0	6885 aa	Known RBP	4.45	□□□□□ -1.7
UBR1-207	ENST00000568782		H3BS24	57 aa		4.45	□□□□□ -1.7
UBR1-207	ENST00000568782		P0C880	135 aa		4.44	□□□□□ -1.7
UBR1-207	ENST00000568782	KRTAP4-8	Q9BYQ9	185 aa		4.44	□□□□□ -1.7
UBR1-207	ENST00000568782	LINC01554	Q52M75	96 aa		4.42	□□□□□ -1.7
UBR1-207	ENST00000568782	SNURF	Q9Y675	71 aa		4.4	□□□□□ -1.71
UBR1-207	ENST00000568782	SERP2	Q8N6R1	65 aa		4.37	□□□□□ -1.71
UBR1-207	ENST00000568782	SPANXA2-OT1	Q8N9U9	137 aa		4.36	□□□□□ -1.71
UBR1-207	ENST00000568782	MT1X	P80297	61 aa		4.32	□□□□□ -1.72
UBR1-207	ENST00000568782	KRTAP5-9	P26371	169 aa		4.31	□□□□□ -1.72
UBR1-207	ENST00000568782	SEC61G	P60059	68 aa		4.28	□□□□□ -1.72
UBR1-207	ENST00000568782	KRTAP8-1	Q8IUC2	63 aa		4.26	□□□□□ -1.73
UBR1-207	ENST00000568782	SERP1	Q9Y6X1	66 aa		4.26	□□□□□ -1.73
UBR1-207	ENST00000568782	KRTAP12-2	P59991	146 aa		4.25	□□□□□ -1.73
UBR1-207	ENST00000568782	SPRR2F	Q96RM1	72 aa		4.25	□□□□□ -1.73
UBR1-207	ENST00000568782	COX7C	P15954	63 aa		4.23	□□□□□ -1.73
UBR1-207	ENST00000568782	COA5	Q86WW8	74 aa		4.23	□□□□□ -1.73
UBR1-207	ENST00000568782	KRTAP20-1	Q3LI63	56 aa		4.22	□□□□□ -1.73
UBR1-207	ENST00000568782	CAMK2N1	Q7Z7J9	78 aa		4.2	□□□□□ -1.74
UBR1-207	ENST00000568782	MUC12	Q9UKN1	5478 aa		4.2	□□□□□ -1.74
UBR1-207	ENST00000568782		A0A0A0MQY5	61 aa		4.19	□□□□□ -1.74
UBR1-207	ENST00000568782	KRTAP4-8	A0A0G2JLE6	195 aa		4.19	□□□□□ -1.74
UBR1-207	ENST00000568782	SPRR2E	P22531	72 aa		4.19	□□□□□ -1.74
UBR1-207	ENST00000568782	SPRR2B	P35325	72 aa		4.19	□□□□□ -1.74
UBR1-207	ENST00000568782	SPRR2A	P35326	72 aa		4.19	□□□□□ -1.74
UBR1-207	ENST00000568782	NEB	P20929	6669 aa		4.15	□□□□□ -1.74
UBR1-207	ENST00000568782	KRTAP9-9	Q9BYP9	154 aa		4.15	□□□□□ -1.75
UBR1-207	ENST00000568782	KRTAP9-4	Q9BYQ2	154 aa		4.15	□□□□□ -1.75
UBR1-207	ENST00000568782	LCE3B	Q5TA77	95 aa		4.14	□□□□□ -1.75
UBR1-207	ENST00000568782	KMT2D	O14686	5537 aa		4.14	□□□□□ -1.75
UBR1-207	ENST00000568782		H7BZZ5	65 aa		4.13	□□□□□ -1.75
UBR1-207	ENST00000568782	KRTAP2-3	P0C7H8	128 aa		4.13	□□□□□ -1.75
UBR1-207	ENST00000568782	KRTAP10-7	P60409	375 aa	Predicted RBP	4.13	□□□□□ -1.75
UBR1-207	ENST00000568782	ANAPC13	Q9BS18	74 aa		4.13	□□□□□ -1.75
UBR1-207	ENST00000568782	KRTAP2-4	Q9BYR9	128 aa		4.13	□□□□□ -1.75
UBR1-207	ENST00000568782	KRTAP10-12	P60413	245 aa		4.12	□□□□□ -1.75
UBR1-207	ENST00000568782		A0A1B0GU33	70 aa		4.11	□□□□□ -1.75
UBR1-207	ENST00000568782	KRTAP13-4	Q3LI77	160 aa		4.11	□□□□□ -1.75
UBR1-207	ENST00000568782		A0A0D9SG42	100 aa		4.1	□□□□□ -1.75
UBR1-207	ENST00000568782		A0A1B0GU69	56 aa		4.08	□□□□□ -1.76
UBR1-207	ENST00000568782	SPINT4	Q6UDR6	99 aa		4.08	□□□□□ -1.76
UBR1-207	ENST00000568782	KRTAP4-7	Q9BYR0	210 aa		4.08	□□□□□ -1.76
UBR1-207	ENST00000568782	MDN1	Q9NU22	5596 aa		4.07	□□□□□ -1.76
UBR1-207	ENST00000568782	LCE1A	Q5T7P2	110 aa		4.07	□□□□□ -1.76
UBR1-207	ENST00000568782	SPATA8	Q6RVD6	105 aa		4.06	□□□□□ -1.76
UBR1-207	ENST00000568782	SPRR2D	P22532	72 aa		4.05	□□□□□ -1.76
UBR1-207	ENST00000568782	CYSTM1	Q9H1C7	97 aa		4.05	□□□□□ -1.76
UBR1-207	ENST00000568782	SMIM26	A0A096LP01	95 aa		4.04	□□□□□ -1.76
UBR1-207	ENST00000568782	KRTAP4-12	Q9BQ66	201 aa		4.04	□□□□□ -1.76
UBR1-207	ENST00000568782	PRR15L	Q9BU68	103 aa		4.02	□□□□□ -1.77
UBR1-207	ENST00000568782	ATP5E	P56381	51 aa	Predicted RBP	4.01	□□□□□ -1.77
UBR1-207	ENST00000568782	KRTAP2-2	Q9BYT5	123 aa		4	□□□□□ -1.77
UBR1-207	ENST00000568782	KRTAP2-1	Q9BYU5	128 aa		4	□□□□□ -1.77
UBR1-207	ENST00000568782	CCDC179	H3BU77	68 aa		3.96	□□□□□ -1.78
UBR1-207	ENST00000568782	KRTAP12-1	P59990	96 aa		3.96	□□□□□ -1.78
UBR1-207	ENST00000568782	KRTAP4-2	Q9BYR5	136 aa		3.94	□□□□□ -1.78
UBR1-207	ENST00000568782	KRTAP5-3	Q6L8H2	238 aa		3.91	□□□□□ -1.78
UBR1-207	ENST00000568782		A8MU10	97 aa		3.89	□□□□□ -1.79
UBR1-207	ENST00000568782	LCE1D	Q5T752	114 aa		3.89	□□□□□ -1.79
UBR1-207	ENST00000568782	TMEM258	P61165	79 aa		3.88	□□□□□ -1.79
UBR1-207	ENST00000568782	KRTAP23-1	A1A580	65 aa		3.87	□□□□□ -1.79
UBR1-207	ENST00000568782	KRTAP4-9	Q9BYQ8	210 aa		3.87	□□□□□ -1.79
UBR1-207	ENST00000568782	LINC01558	Q9Y6Z2	57 aa		3.87	□□□□□ -1.79

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