RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 DMAC1Q96GE9 116 aa6.49□□□□□ -1.37
TMEM170A-205ENST00000568559 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
TMEM170A-205ENST00000568559 HECTD4Q9Y4D8 3996 aa6.48□□□□□ -1.37
TMEM170A-205ENST00000568559 FAT2Q9NYQ8 4349 aa6.46□□□□□ -1.37
TMEM170A-205ENST00000568559 KIAA1109Q2LD37 5005 aa6.45□□□□□ -1.38
TMEM170A-205ENST00000568559 M0QZ58 72 aa6.44□□□□□ -1.38
TMEM170A-205ENST00000568559 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
TMEM170A-205ENST00000568559 RYR3Q15413 4870 aa6.42□□□□□ -1.38
TMEM170A-205ENST00000568559 PKHD1P08F94 4074 aa6.39□□□□□ -1.39
TMEM170A-205ENST00000568559 VPS13BQ7Z7G8 4022 aa6.39□□□□□ -1.39
TMEM170A-205ENST00000568559 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
TMEM170A-205ENST00000568559 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
TMEM170A-205ENST00000568559 FRAS1Q86XX4 4008 aa6.34□□□□□ -1.39
TMEM170A-205ENST00000568559 H1FX-AS1Q4G0G2 97 aa6.34□□□□□ -1.4
TMEM170A-205ENST00000568559 RYR1P21817 5038 aa6.33□□□□□ -1.4
TMEM170A-205ENST00000568559 PKD1P98161 4303 aa6.33□□□□□ -1.4
TMEM170A-205ENST00000568559 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
TMEM170A-205ENST00000568559 HSPG2P98160 4391 aa6.18□□□□□ -1.42
TMEM170A-205ENST00000568559 EPPK1P58107 5090 aaKnown RBP6.16□□□□□ -1.42
TMEM170A-205ENST00000568559 ROMO1P60602 79 aa6.14□□□□□ -1.43
TMEM170A-205ENST00000568559 KRTAP25-1Q3LHN0 102 aa6.11□□□□□ -1.43
TMEM170A-205ENST00000568559 BIRC6Q9NR09 4857 aa6.1□□□□□ -1.43
TMEM170A-205ENST00000568559 MYCBP2O75592 4640 aa6.1□□□□□ -1.43
TMEM170A-205ENST00000568559 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
TMEM170A-205ENST00000568559 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
TMEM170A-205ENST00000568559 HERC2O95714 4834 aa6.07□□□□□ -1.44
TMEM170A-205ENST00000568559 P0C880 135 aa6.06□□□□□ -1.44
TMEM170A-205ENST00000568559 FAT3Q8TDW7 4589 aa6.02□□□□□ -1.45
TMEM170A-205ENST00000568559 KRTAP10-10P60014 251 aa6.02□□□□□ -1.45
TMEM170A-205ENST00000568559 H0YAA0 97 aa5.98□□□□□ -1.45
TMEM170A-205ENST00000568559 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
TMEM170A-205ENST00000568559 NDUFAF8A1L188 74 aa5.94□□□□□ -1.46
TMEM170A-205ENST00000568559 ABCA13Q86UQ4 5058 aa5.91□□□□□ -1.46
TMEM170A-205ENST00000568559 KRTAP4-1Q9BYQ7 146 aa5.86□□□□□ -1.47
TMEM170A-205ENST00000568559 LUZP6Q538Z0 58 aa5.86□□□□□ -1.47
TMEM170A-205ENST00000568559 PKHD1L1Q86WI1 4243 aa5.83□□□□□ -1.48
TMEM170A-205ENST00000568559 TNXBP22105 4242 aa5.83□□□□□ -1.48
TMEM170A-205ENST00000568559 KRTAP3-3Q9BYR6 98 aa5.81□□□□□ -1.48
TMEM170A-205ENST00000568559 LRP2P98164 4655 aa5.8□□□□□ -1.48
TMEM170A-205ENST00000568559 A0A0A0MQY5 61 aa5.74□□□□□ -1.49
TMEM170A-205ENST00000568559 LPAP08519 4548 aa5.72□□□□□ -1.49
TMEM170A-205ENST00000568559 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
TMEM170A-205ENST00000568559 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.49
TMEM170A-205ENST00000568559 TNP1P09430 55 aa5.69□□□□□ -1.5
TMEM170A-205ENST00000568559 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
TMEM170A-205ENST00000568559 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
TMEM170A-205ENST00000568559 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
TMEM170A-205ENST00000568559 HERC1Q15751 4861 aa5.62□□□□□ -1.51
TMEM170A-205ENST00000568559 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
TMEM170A-205ENST00000568559 MT1HP80294 61 aa5.54□□□□□ -1.52
TMEM170A-205ENST00000568559 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
TMEM170A-205ENST00000568559 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
TMEM170A-205ENST00000568559 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
TMEM170A-205ENST00000568559 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
TMEM170A-205ENST00000568559 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
TMEM170A-205ENST00000568559 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
TMEM170A-205ENST00000568559 MT2AP02795 61 aa5.36□□□□□ -1.55
TMEM170A-205ENST00000568559 KRTAP19-2Q3LHN2 52 aa5.35□□□□□ -1.55
TMEM170A-205ENST00000568559 UBR4Q5T4S7 5183 aa5.35□□□□□ -1.55
TMEM170A-205ENST00000568559 MUC2Q02817 5179 aa5.35□□□□□ -1.55
TMEM170A-205ENST00000568559 RNF213Q63HN8 5207 aa5.34□□□□□ -1.55
TMEM170A-205ENST00000568559 MT1FP04733 61 aa5.32□□□□□ -1.56
TMEM170A-205ENST00000568559 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
TMEM170A-205ENST00000568559 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
TMEM170A-205ENST00000568559 SPRR2GQ9BYE4 73 aa5.21□□□□□ -1.58
TMEM170A-205ENST00000568559 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
TMEM170A-205ENST00000568559 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
TMEM170A-205ENST00000568559 FAT4Q6V0I7 4981 aa5.21□□□□□ -1.58
TMEM170A-205ENST00000568559 FLGP20930 4061 aaPredicted RBP5.19□□□□□ -1.58
TMEM170A-205ENST00000568559 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
TMEM170A-205ENST00000568559 KRTAP19-1Q8IUB9 90 aa5.13□□□□□ -1.59
TMEM170A-205ENST00000568559 OBSCNQ5VST9 7968 aa5.04□□□□□ -1.6
TMEM170A-205ENST00000568559 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
TMEM170A-205ENST00000568559 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
TMEM170A-205ENST00000568559 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
TMEM170A-205ENST00000568559 KRTAP19-8Q3LI54 63 aa5□□□□□ -1.61
TMEM170A-205ENST00000568559 LCE3AQ5TA76 89 aa4.96□□□□□ -1.61
TMEM170A-205ENST00000568559 MT1BP07438 61 aa4.94□□□□□ -1.62
TMEM170A-205ENST00000568559 LCE2BO14633 110 aa4.89□□□□□ -1.63
TMEM170A-205ENST00000568559 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
TMEM170A-205ENST00000568559 SYNE1Q8NF91 8797 aaKnown RBP4.85□□□□□ -1.63
TMEM170A-205ENST00000568559 MT1XP80297 61 aa4.83□□□□□ -1.64
TMEM170A-205ENST00000568559 KRTAP10-5P60370 271 aa4.81□□□□□ -1.64
TMEM170A-205ENST00000568559 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
TMEM170A-205ENST00000568559 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
TMEM170A-205ENST00000568559 KRTAP10-7P60409 375 aaPredicted RBP4.75□□□□□ -1.65
TMEM170A-205ENST00000568559 USH2AO75445 5202 aa4.68□□□□□ -1.66
TMEM170A-205ENST00000568559 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
TMEM170A-205ENST00000568559 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
TMEM170A-205ENST00000568559 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
TMEM170A-205ENST00000568559 KRTAP9-2Q9BYQ4 174 aa4.63□□□□□ -1.67
TMEM170A-205ENST00000568559 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
TMEM170A-205ENST00000568559 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
TMEM170A-205ENST00000568559 KRTAP19-6Q3LI70 58 aa4.56□□□□□ -1.68
TMEM170A-205ENST00000568559 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
TMEM170A-205ENST00000568559 INE1O15225 51 aa4.47□□□□□ -1.69
TMEM170A-205ENST00000568559 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
TMEM170A-205ENST00000568559 SYNE2Q8WXH0 6885 aaKnown RBP4.46□□□□□ -1.7
TMEM170A-205ENST00000568559 KMT2DO14686 5537 aa4.42□□□□□ -1.7
TMEM170A-205ENST00000568559 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms