RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 A8MUU9 505 aa12.72□□□□□ -0.37
LINC00543-201ENST00000567234 ADM2Q7Z4H4 148 aa12.7□□□□□ -0.38
LINC00543-201ENST00000567234 C9orf92A6NGG3 77 aa12.69□□□□□ -0.38
LINC00543-201ENST00000567234 MT1HL1P0DM35 61 aa12.68□□□□□ -0.38
LINC00543-201ENST00000567234 IGKV2D-30A0A075B6S6 120 aa12.65□□□□□ -0.38
LINC00543-201ENST00000567234 DMBT1Q9UGM3 2413 aaPredicted RBP12.58□□□□□ -0.4
LINC00543-201ENST00000567234 CSAG1Q6PB30 78 aa12.53□□□□□ -0.4
LINC00543-201ENST00000567234 PCLOQ9Y6V0 5065 aa12.4□□□□□ -0.42
LINC00543-201ENST00000567234 H3BS24 57 aa12.38□□□□□ -0.43
LINC00543-201ENST00000567234 J3QL48 77 aa12.38□□□□□ -0.43
LINC00543-201ENST00000567234 RPL37P61927 97 aaKnown RBP12.33□□□□□ -0.44
LINC00543-201ENST00000567234 XP32Q5T750 250 aa12.31□□□□□ -0.44
LINC00543-201ENST00000567234 KRTAP25-1Q3LHN0 102 aa12.3□□□□□ -0.44
LINC00543-201ENST00000567234 H0YAA0 97 aa12.21□□□□□ -0.45
LINC00543-201ENST00000567234 TPRXLQ17RH7 258 aa12.18□□□□□ -0.46
LINC00543-201ENST00000567234 A0A1B0GU33 70 aa12.17□□□□□ -0.46
LINC00543-201ENST00000567234 KRTAP3-1Q9BYR8 98 aa12.14□□□□□ -0.47
LINC00543-201ENST00000567234 ROMO1P60602 79 aa12.12□□□□□ -0.47
LINC00543-201ENST00000567234 H1FX-AS1Q4G0G2 97 aa12.12□□□□□ -0.47
LINC00543-201ENST00000567234 COX6B2Q6YFQ2 88 aa12.12□□□□□ -0.47
LINC00543-201ENST00000567234 K7ERS5 55 aa12.11□□□□□ -0.47
LINC00543-201ENST00000567234 HERC1Q15751 4861 aa12.04□□□□□ -0.48
LINC00543-201ENST00000567234 LPAP08519 4548 aa12.04□□□□□ -0.48
LINC00543-201ENST00000567234 LRP2P98164 4655 aa11.87□□□□□ -0.51
LINC00543-201ENST00000567234 HMCN2Q8NDA2 5059 aa11.81□□□□□ -0.52
LINC00543-201ENST00000567234 SEC61BP60468 96 aaKnown RBP11.74□□□□□ -0.53
LINC00543-201ENST00000567234 S4R3F8 94 aa11.7□□□□□ -0.54
LINC00543-201ENST00000567234 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
LINC00543-201ENST00000567234 P0C880 135 aa11.6□□□□□ -0.55
LINC00543-201ENST00000567234 KRTAP10-6P60371 365 aaPredicted RBP11.49□□□□□ -0.57
LINC00543-201ENST00000567234 MUC17Q685J3 4493 aa11.49□□□□□ -0.57
LINC00543-201ENST00000567234 KRTAP4-1Q9BYQ7 146 aa11.48□□□□□ -0.57
LINC00543-201ENST00000567234 CRIPTQ9P021 101 aa11.43□□□□□ -0.58
LINC00543-201ENST00000567234 SPINT4Q6UDR6 99 aa11.42□□□□□ -0.58
LINC00543-201ENST00000567234 UBR4Q5T4S7 5183 aa11.39□□□□□ -0.59
LINC00543-201ENST00000567234 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
LINC00543-201ENST00000567234 MUC2Q02817 5179 aa11.36□□□□□ -0.59
LINC00543-201ENST00000567234 KRTAP15-1Q3LI76 137 aa11.32□□□□□ -0.6
LINC00543-201ENST00000567234 KRTAP13-4Q3LI77 160 aa11.31□□□□□ -0.6
LINC00543-201ENST00000567234 KRTAP19-2Q3LHN2 52 aa11.22□□□□□ -0.61
LINC00543-201ENST00000567234 A0A0D9SG42 100 aa11.21□□□□□ -0.61
LINC00543-201ENST00000567234 RNF213Q63HN8 5207 aa11.19□□□□□ -0.62
LINC00543-201ENST00000567234 NDUFAF8A1L188 74 aa11.09□□□□□ -0.63
LINC00543-201ENST00000567234 M0QZ58 72 aa11.07□□□□□ -0.64
LINC00543-201ENST00000567234 C10orf95Q9H7T3 257 aa11.07□□□□□ -0.64
LINC00543-201ENST00000567234 KRTAP12-2P59991 146 aa11.05□□□□□ -0.64
LINC00543-201ENST00000567234 KRTAP12-1P59990 96 aa11.04□□□□□ -0.64
LINC00543-201ENST00000567234 FLGP20930 4061 aaPredicted RBP10.96□□□□□ -0.65
LINC00543-201ENST00000567234 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
LINC00543-201ENST00000567234 FAT4Q6V0I7 4981 aa10.89□□□□□ -0.67
LINC00543-201ENST00000567234 R4GN34 69 aa10.8□□□□□ -0.68
LINC00543-201ENST00000567234 MT1HP80294 61 aa10.7□□□□□ -0.7
LINC00543-201ENST00000567234 LORP23490 312 aaPredicted RBP10.69□□□□□ -0.7
LINC00543-201ENST00000567234 M0R2T5 61 aa10.55□□□□□ -0.72
LINC00543-201ENST00000567234 PLAC4Q8WY50 150 aa10.55□□□□□ -0.72
LINC00543-201ENST00000567234 PP632Q6XCG6 107 aa10.51□□□□□ -0.73
LINC00543-201ENST00000567234 LCE2AQ5TA79 106 aaPredicted RBP10.42□□□□□ -0.74
LINC00543-201ENST00000567234 LUZP6Q538Z0 58 aa10.34□□□□□ -0.75
LINC00543-201ENST00000567234 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.77
LINC00543-201ENST00000567234 SPRR2GQ9BYE4 73 aa10.26□□□□□ -0.77
LINC00543-201ENST00000567234 A0A0A0MQY5 61 aa10.25□□□□□ -0.77
LINC00543-201ENST00000567234 MT2AP02795 61 aa10.23□□□□□ -0.77
LINC00543-201ENST00000567234 MT1FP04733 61 aa10.18□□□□□ -0.78
LINC00543-201ENST00000567234 CAMK2N1Q7Z7J9 78 aa10.16□□□□□ -0.78
LINC00543-201ENST00000567234 KRTAP19-1Q8IUB9 90 aa10.16□□□□□ -0.78
LINC00543-201ENST00000567234 KRTAP23-1A1A580 65 aa10.14□□□□□ -0.79
LINC00543-201ENST00000567234 KRTAP10-10P60014 251 aa10.14□□□□□ -0.79
LINC00543-201ENST00000567234 SPRR5A0A1B0GTR4 108 aa9.92□□□□□ -0.82
LINC00543-201ENST00000567234 KRTAP19-8Q3LI54 63 aa9.92□□□□□ -0.82
LINC00543-201ENST00000567234 KRTAP9-3Q9BYQ3 159 aa9.9□□□□□ -0.82
LINC00543-201ENST00000567234 TNP1P09430 55 aa9.79□□□□□ -0.84
LINC00543-201ENST00000567234 MT1BP07438 61 aa9.72□□□□□ -0.85
LINC00543-201ENST00000567234 LCE2BO14633 110 aa9.7□□□□□ -0.86
LINC00543-201ENST00000567234 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
LINC00543-201ENST00000567234 KRTAP10-5P60370 271 aa9.5□□□□□ -0.89
LINC00543-201ENST00000567234 MT1XP80297 61 aa9.5□□□□□ -0.89
LINC00543-201ENST00000567234 USH2AO75445 5202 aa9.49□□□□□ -0.89
LINC00543-201ENST00000567234 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.91
LINC00543-201ENST00000567234 FSIP2Q5CZC0 6907 aa9.38□□□□□ -0.91
LINC00543-201ENST00000567234 INE1O15225 51 aa9.33□□□□□ -0.92
LINC00543-201ENST00000567234 KRTAP9-2Q9BYQ4 174 aa9.3□□□□□ -0.92
LINC00543-201ENST00000567234 LCE3AQ5TA76 89 aa9.24□□□□□ -0.93
LINC00543-201ENST00000567234 SSPOA2VEC9 5147 aa9.23□□□□□ -0.93
LINC00543-201ENST00000567234 KRTAP10-12P60413 245 aa9.15□□□□□ -0.94
LINC00543-201ENST00000567234 KRTAP10-7P60409 375 aaPredicted RBP9.13□□□□□ -0.95
LINC00543-201ENST00000567234 KRTAP8-1Q8IUC2 63 aa9.12□□□□□ -0.95
LINC00543-201ENST00000567234 KRTAP19-6Q3LI70 58 aa9.08□□□□□ -0.96
LINC00543-201ENST00000567234 CRCT1Q9UGL9 99 aa8.91□□□□□ -0.98
LINC00543-201ENST00000567234 KRTAP12-3P60328 96 aa8.89□□□□□ -0.99
LINC00543-201ENST00000567234 FCGBPQ9Y6R7 5405 aaPredicted RBP8.88□□□□□ -0.99
LINC00543-201ENST00000567234 KMT2DO14686 5537 aa8.68□□□□□ -1.02
LINC00543-201ENST00000567234 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
LINC00543-201ENST00000567234 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
LINC00543-201ENST00000567234 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
LINC00543-201ENST00000567234 KRTAP9-6A0A140TA67 174 aa8.61□□□□□ -1.03
LINC00543-201ENST00000567234 MACF1Q9UPN3 7388 aaKnown RBP8.54□□□□□ -1.04
LINC00543-201ENST00000567234 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
LINC00543-201ENST00000567234 KRTAP19-4Q3LI73 84 aa8.36□□□□□ -1.07
LINC00543-201ENST00000567234 SYNE2Q8WXH0 6885 aaKnown RBP8.35□□□□□ -1.07
LINC00543-201ENST00000567234 LCE3CQ5T5A8 94 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms