RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
LINC00563-201ENST00000566370 RYR1P21817 5038 aa6.94□□□□□ -1.3
LINC00563-201ENST00000566370 DMBT1Q9UGM3 2413 aaPredicted RBP6.92□□□□□ -1.3
LINC00563-201ENST00000566370 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
LINC00563-201ENST00000566370 S4R3F8 94 aa6.91□□□□□ -1.3
LINC00563-201ENST00000566370 TNXBP22105 4242 aa6.9□□□□□ -1.3
LINC00563-201ENST00000566370 A0A1B0GU33 70 aa6.9□□□□□ -1.31
LINC00563-201ENST00000566370 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.31
LINC00563-201ENST00000566370 RBM12B-AS1Q9P1G2 102 aa6.88□□□□□ -1.31
LINC00563-201ENST00000566370 H1FX-AS1Q4G0G2 97 aa6.87□□□□□ -1.31
LINC00563-201ENST00000566370 RYR3Q15413 4870 aa6.85□□□□□ -1.31
LINC00563-201ENST00000566370 LOC100996750A0A140TA64 210 aa6.84□□□□□ -1.32
LINC00563-201ENST00000566370 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.32
LINC00563-201ENST00000566370 LRP1Q07954 4544 aaKnown RBP6.83□□□□□ -1.32
LINC00563-201ENST00000566370 K7ERS5 55 aa6.81□□□□□ -1.32
LINC00563-201ENST00000566370 SEC61BP60468 96 aaKnown RBP6.81□□□□□ -1.32
LINC00563-201ENST00000566370 H3BS24 57 aa6.79□□□□□ -1.32
LINC00563-201ENST00000566370 KIAA1109Q2LD37 5005 aa6.78□□□□□ -1.32
LINC00563-201ENST00000566370 H0YAA0 97 aa6.76□□□□□ -1.33
LINC00563-201ENST00000566370 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
LINC00563-201ENST00000566370 KRTAP4-5Q9BYR2 181 aa6.72□□□□□ -1.33
LINC00563-201ENST00000566370 KRTAP10-6P60371 365 aaPredicted RBP6.63□□□□□ -1.35
LINC00563-201ENST00000566370 MYCBP2O75592 4640 aa6.62□□□□□ -1.35
LINC00563-201ENST00000566370 EPPK1P58107 5090 aaKnown RBP6.62□□□□□ -1.35
LINC00563-201ENST00000566370 ADM2Q7Z4H4 148 aa6.6□□□□□ -1.35
LINC00563-201ENST00000566370 M0QZ58 72 aa6.55□□□□□ -1.36
LINC00563-201ENST00000566370 P0C880 135 aa6.53□□□□□ -1.36
LINC00563-201ENST00000566370 PRAC1Q96KF2 57 aa6.53□□□□□ -1.36
LINC00563-201ENST00000566370 A0A0D9SG42 100 aa6.51□□□□□ -1.37
LINC00563-201ENST00000566370 KRTAP13-4Q3LI77 160 aa6.47□□□□□ -1.37
LINC00563-201ENST00000566370 ROMO1P60602 79 aa6.45□□□□□ -1.38
LINC00563-201ENST00000566370 LRP2P98164 4655 aa6.41□□□□□ -1.38
LINC00563-201ENST00000566370 R4GN34 69 aa6.4□□□□□ -1.39
LINC00563-201ENST00000566370 LINC01554Q52M75 96 aa6.38□□□□□ -1.39
LINC00563-201ENST00000566370 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
LINC00563-201ENST00000566370 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
LINC00563-201ENST00000566370 SPINT4Q6UDR6 99 aa6.37□□□□□ -1.39
LINC00563-201ENST00000566370 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
LINC00563-201ENST00000566370 BIRC6Q9NR09 4857 aa6.36□□□□□ -1.39
LINC00563-201ENST00000566370 ABCA13Q86UQ4 5058 aa6.35□□□□□ -1.39
LINC00563-201ENST00000566370 HERC2O95714 4834 aa6.35□□□□□ -1.39
LINC00563-201ENST00000566370 LPAP08519 4548 aa6.33□□□□□ -1.4
LINC00563-201ENST00000566370 KRTAP12-1P59990 96 aa6.32□□□□□ -1.4
LINC00563-201ENST00000566370 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
LINC00563-201ENST00000566370 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
LINC00563-201ENST00000566370 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
LINC00563-201ENST00000566370 KRTAP19-2Q3LHN2 52 aa6.25□□□□□ -1.41
LINC00563-201ENST00000566370 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
LINC00563-201ENST00000566370 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
LINC00563-201ENST00000566370 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.21□□□□□ -1.42
LINC00563-201ENST00000566370 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
LINC00563-201ENST00000566370 KRTAP9-6A0A140TA67 174 aa6.18□□□□□ -1.42
LINC00563-201ENST00000566370 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
LINC00563-201ENST00000566370 M0R2T5 61 aa6.05□□□□□ -1.44
LINC00563-201ENST00000566370 LCE3BQ5TA77 95 aa6.05□□□□□ -1.44
LINC00563-201ENST00000566370 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
LINC00563-201ENST00000566370 C10orf95Q9H7T3 257 aa6□□□□□ -1.45
LINC00563-201ENST00000566370 HERC1Q15751 4861 aa6□□□□□ -1.45
LINC00563-201ENST00000566370 HMCN2Q8NDA2 5059 aa5.98□□□□□ -1.45
LINC00563-201ENST00000566370 PCLOQ9Y6V0 5065 aa5.98□□□□□ -1.45
LINC00563-201ENST00000566370 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
LINC00563-201ENST00000566370 KRTAP9-9Q9BYP9 154 aa5.92□□□□□ -1.46
LINC00563-201ENST00000566370 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
LINC00563-201ENST00000566370 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
LINC00563-201ENST00000566370 MT1HP80294 61 aa5.91□□□□□ -1.46
LINC00563-201ENST00000566370 PLAC4Q8WY50 150 aa5.91□□□□□ -1.46
LINC00563-201ENST00000566370 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
LINC00563-201ENST00000566370 TNP1P09430 55 aa5.83□□□□□ -1.48
LINC00563-201ENST00000566370 KRTAP10-10P60014 251 aa5.82□□□□□ -1.48
LINC00563-201ENST00000566370 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
LINC00563-201ENST00000566370 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
LINC00563-201ENST00000566370 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
LINC00563-201ENST00000566370 MT2AP02795 61 aa5.76□□□□□ -1.49
LINC00563-201ENST00000566370 MUC2Q02817 5179 aa5.75□□□□□ -1.49
LINC00563-201ENST00000566370 KRTAP9-7A8MTY7 169 aa5.74□□□□□ -1.49
LINC00563-201ENST00000566370 MT1FP04733 61 aa5.72□□□□□ -1.49
LINC00563-201ENST00000566370 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
LINC00563-201ENST00000566370 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
LINC00563-201ENST00000566370 RNF213Q63HN8 5207 aa5.69□□□□□ -1.5
LINC00563-201ENST00000566370 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
LINC00563-201ENST00000566370 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
LINC00563-201ENST00000566370 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.51
LINC00563-201ENST00000566370 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
LINC00563-201ENST00000566370 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
LINC00563-201ENST00000566370 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
LINC00563-201ENST00000566370 KRTAP4-9Q9BYQ8 210 aa5.51□□□□□ -1.53
LINC00563-201ENST00000566370 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
LINC00563-201ENST00000566370 MT1BP07438 61 aa5.48□□□□□ -1.53
LINC00563-201ENST00000566370 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
LINC00563-201ENST00000566370 NDUFAF8A1L188 74 aa5.45□□□□□ -1.54
LINC00563-201ENST00000566370 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
LINC00563-201ENST00000566370 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
LINC00563-201ENST00000566370 MT1XP80297 61 aa5.4□□□□□ -1.55
LINC00563-201ENST00000566370 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
LINC00563-201ENST00000566370 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
LINC00563-201ENST00000566370 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
LINC00563-201ENST00000566370 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
LINC00563-201ENST00000566370 KRTAP4-2Q9BYR5 136 aa5.31□□□□□ -1.56
LINC00563-201ENST00000566370 SPRR5A0A1B0GTR4 108 aa5.23□□□□□ -1.57
LINC00563-201ENST00000566370 KRTAP12-3P60328 96 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms