RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
SMPD3-206ENST00000566009 JMJD7-PLA2G4BH0Y9G9 81 aa3.72□□□□□ -1.81
SMPD3-206ENST00000566009 H1FX-AS1Q4G0G2 97 aa3.72□□□□□ -1.81
SMPD3-206ENST00000566009 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
SMPD3-206ENST00000566009 IGKV3D-7A0A0C4DH55 119 aa3.71□□□□□ -1.82
SMPD3-206ENST00000566009 IGHV6-1A0A0B4J1U7 121 aa3.7□□□□□ -1.82
SMPD3-206ENST00000566009 MT1XP80297 61 aa3.7□□□□□ -1.82
SMPD3-206ENST00000566009 A0A1B0GW54 56 aa3.68□□□□□ -1.82
SMPD3-206ENST00000566009 C8orf87E5RJ46 101 aa3.68□□□□□ -1.82
SMPD3-206ENST00000566009 J3KT08 172 aa3.68□□□□□ -1.82
SMPD3-206ENST00000566009 PDE6GP18545 87 aa3.68□□□□□ -1.82
SMPD3-206ENST00000566009 A0A1B0GVX0 72 aa3.67□□□□□ -1.82
SMPD3-206ENST00000566009 NDUFB1O75438 58 aa3.67□□□□□ -1.82
SMPD3-206ENST00000566009 HIST1H4AP62805 103 aaKnown RBP3.67□□□□□ -1.82
SMPD3-206ENST00000566009 A0A087WVE0 104 aa3.66□□□□□ -1.82
SMPD3-206ENST00000566009 Q6ZVQ6 151 aa3.66□□□□□ -1.82
SMPD3-206ENST00000566009 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
SMPD3-206ENST00000566009 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.83
SMPD3-206ENST00000566009 NREPQ16612 68 aa3.63□□□□□ -1.83
SMPD3-206ENST00000566009 KLKP1Q107X0 134 aa3.62□□□□□ -1.83
SMPD3-206ENST00000566009 LCE5AQ5TCM9 118 aa3.62□□□□□ -1.83
SMPD3-206ENST00000566009 ATP5EP2Q5VTU8 51 aa3.62□□□□□ -1.83
SMPD3-206ENST00000566009 UBL5Q9BZL1 73 aa3.62□□□□□ -1.83
SMPD3-206ENST00000566009 C8orf17Q9NRJ1 99 aa3.61□□□□□ -1.83
SMPD3-206ENST00000566009 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
SMPD3-206ENST00000566009 CXCL6P80162 114 aa3.6□□□□□ -1.83
SMPD3-206ENST00000566009 C5orf47Q569G3 176 aa3.59□□□□□ -1.83
SMPD3-206ENST00000566009 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
SMPD3-206ENST00000566009 PRR15Q8IV56 129 aa3.59□□□□□ -1.83
SMPD3-206ENST00000566009 Q8N9L7 120 aa3.59□□□□□ -1.83
SMPD3-206ENST00000566009 BPY2O14599 106 aa3.58□□□□□ -1.84
SMPD3-206ENST00000566009 CYSTM1Q9H1C7 97 aa3.58□□□□□ -1.84
SMPD3-206ENST00000566009 MUC5BQ9HC84 5762 aaPredicted RBP3.58□□□□□ -1.84
SMPD3-206ENST00000566009 ATOX1O00244 68 aa3.57□□□□□ -1.84
SMPD3-206ENST00000566009 COX7CP15954 63 aa3.57□□□□□ -1.84
SMPD3-206ENST00000566009 MRPL34Q9BQ48 92 aaKnown RBP3.56□□□□□ -1.84
SMPD3-206ENST00000566009 SERP2Q8N6R1 65 aa3.55□□□□□ -1.84
SMPD3-206ENST00000566009 TMEM254Q8TBM7 123 aa3.55□□□□□ -1.84
SMPD3-206ENST00000566009 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
SMPD3-206ENST00000566009 hDV103S1A0JD37 113 aa3.54□□□□□ -1.84
SMPD3-206ENST00000566009 UQCRQO14949 82 aa3.54□□□□□ -1.84
SMPD3-206ENST00000566009 K7EQZ3 153 aa3.53□□□□□ -1.84
SMPD3-206ENST00000566009 NDUFS5O43920 106 aa3.53□□□□□ -1.84
SMPD3-206ENST00000566009 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
SMPD3-206ENST00000566009 TRAV7A0A075B6U4 112 aa3.52□□□□□ -1.85
SMPD3-206ENST00000566009 LCA10Q71F78 164 aa3.52□□□□□ -1.85
SMPD3-206ENST00000566009 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
SMPD3-206ENST00000566009 OCR1Q9BZK8 76 aa3.51□□□□□ -1.85
SMPD3-206ENST00000566009 Q5W150 140 aa3.49□□□□□ -1.85
SMPD3-206ENST00000566009 CASC2Q6XLA1 102 aa3.49□□□□□ -1.85
SMPD3-206ENST00000566009 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
SMPD3-206ENST00000566009 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
SMPD3-206ENST00000566009 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
SMPD3-206ENST00000566009 IGKV2D-30A0A075B6S6 120 aa3.47□□□□□ -1.85
SMPD3-206ENST00000566009 HCG22E2RYF7 251 aa3.47□□□□□ -1.85
SMPD3-206ENST00000566009 IGKV2-30P06310 120 aa3.47□□□□□ -1.85
SMPD3-206ENST00000566009 SMIM20Q8N5G0 67 aa3.47□□□□□ -1.85
SMPD3-206ENST00000566009 KRTAP4-7Q9BYR0 210 aa3.47□□□□□ -1.85
SMPD3-206ENST00000566009 CSAG1Q6PB30 78 aa3.46□□□□□ -1.86
SMPD3-206ENST00000566009 SNURFQ9Y675 71 aa3.46□□□□□ -1.86
SMPD3-206ENST00000566009 H7BZZ5 65 aa3.45□□□□□ -1.86
SMPD3-206ENST00000566009 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
SMPD3-206ENST00000566009 C7orf65Q6ZTY9 151 aa3.45□□□□□ -1.86
SMPD3-206ENST00000566009 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
SMPD3-206ENST00000566009 TMEM258P61165 79 aa3.42□□□□□ -1.86
SMPD3-206ENST00000566009 C4orf26Q17RF5 130 aa3.42□□□□□ -1.86
SMPD3-206ENST00000566009 TP53AIP1Q9HCN2 124 aa3.4□□□□□ -1.87
SMPD3-206ENST00000566009 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
SMPD3-206ENST00000566009 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
SMPD3-206ENST00000566009 KRTAP3-1Q9BYR8 98 aa3.37□□□□□ -1.87
SMPD3-206ENST00000566009 H0Y9P7 68 aa3.36□□□□□ -1.87
SMPD3-206ENST00000566009 NDUFC1O43677 76 aa3.36□□□□□ -1.87
SMPD3-206ENST00000566009 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
SMPD3-206ENST00000566009 SEC61GP60059 68 aa3.36□□□□□ -1.87
SMPD3-206ENST00000566009 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
SMPD3-206ENST00000566009 S4R3F8 94 aa3.36□□□□□ -1.87
SMPD3-206ENST00000566009 LINC00208Q96KT6 92 aa3.35□□□□□ -1.87
SMPD3-206ENST00000566009 TRAV22A0A0B4J277 110 aa3.34□□□□□ -1.87
SMPD3-206ENST00000566009 H0YAA0 97 aa3.34□□□□□ -1.87
SMPD3-206ENST00000566009 MT1EP04732 61 aa3.34□□□□□ -1.87
SMPD3-206ENST00000566009 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
SMPD3-206ENST00000566009 H3BS24 57 aa3.33□□□□□ -1.88
SMPD3-206ENST00000566009 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
SMPD3-206ENST00000566009 CYP4F30PQ9H0H9 118 aa3.33□□□□□ -1.88
SMPD3-206ENST00000566009 A8MUN3 132 aa3.31□□□□□ -1.88
SMPD3-206ENST00000566009 H3BPC8 53 aa3.31□□□□□ -1.88
SMPD3-206ENST00000566009 MT1GP13640 62 aa3.31□□□□□ -1.88
SMPD3-206ENST00000566009 MP68P56378 58 aa3.31□□□□□ -1.88
SMPD3-206ENST00000566009 ATP5EP56381 51 aaPredicted RBP3.3□□□□□ -1.88
SMPD3-206ENST00000566009 LOC101927531A0A1B0GV80 90 aa3.29□□□□□ -1.88
SMPD3-206ENST00000566009 PP632Q6XCG6 107 aa3.27□□□□□ -1.89
SMPD3-206ENST00000566009 SPANXA2-OT1Q8N9U9 137 aa3.27□□□□□ -1.89
SMPD3-206ENST00000566009 KRTAP3-3Q9BYR6 98 aa3.27□□□□□ -1.89
SMPD3-206ENST00000566009 KRTAP3-2Q9BYR7 98 aa3.26□□□□□ -1.89
SMPD3-206ENST00000566009 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
SMPD3-206ENST00000566009 KRTAP9-9Q9BYP9 154 aa3.25□□□□□ -1.89
SMPD3-206ENST00000566009 MT1MQ8N339 61 aa3.24□□□□□ -1.89
SMPD3-206ENST00000566009 V9GYY9 64 aa3.24□□□□□ -1.89
SMPD3-206ENST00000566009 KRTAP4-3Q9BYR4 195 aa3.23□□□□□ -1.89
SMPD3-206ENST00000566009 COA5Q86WW8 74 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms