RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DNAH5Q8TE73 4624 aa2.38□□□□□ -2.03
LINC00561-201ENST00000565815 MMP24-AS1A0A0U1RRL7 71 aa2.38□□□□□ -2.03
LINC00561-201ENST00000565815 FLG2Q5D862 2391 aaPredicted RBP2.37□□□□□ -2.03
LINC00561-201ENST00000565815 CD164Q04900 197 aa2.37□□□□□ -2.03
LINC00561-201ENST00000565815 CIRBP-AS1Q8TBR5 109 aa2.37□□□□□ -2.03
LINC00561-201ENST00000565815 LINC01558Q9Y6Z2 57 aa2.37□□□□□ -2.03
LINC00561-201ENST00000565815 HERC1Q15751 4861 aa2.37□□□□□ -2.03
LINC00561-201ENST00000565815 PRLHP81277 87 aa2.37□□□□□ -2.03
LINC00561-201ENST00000565815 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
LINC00561-201ENST00000565815 A0A1W2PNN7 141 aa2.36□□□□□ -2.03
LINC00561-201ENST00000565815 A8MUN3 132 aa2.36□□□□□ -2.03
LINC00561-201ENST00000565815 PSPHP1O15172 72 aa2.36□□□□□ -2.03
LINC00561-201ENST00000565815 COA5Q86WW8 74 aa2.36□□□□□ -2.03
LINC00561-201ENST00000565815 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
LINC00561-201ENST00000565815 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
LINC00561-201ENST00000565815 SPINK6Q6UWN8 80 aa2.35□□□□□ -2.03
LINC00561-201ENST00000565815 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
LINC00561-201ENST00000565815 PRR15LQ9BU68 103 aa2.35□□□□□ -2.03
LINC00561-201ENST00000565815 C8orf17Q9NRJ1 99 aa2.35□□□□□ -2.03
LINC00561-201ENST00000565815 PLAC8Q9NZF1 115 aa2.35□□□□□ -2.03
LINC00561-201ENST00000565815 KRTAP10-8P60410 259 aa2.35□□□□□ -2.03
LINC00561-201ENST00000565815 PHF5AQ7RTV0 110 aaKnown RBP2.35□□□□□ -2.03
LINC00561-201ENST00000565815 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.03
LINC00561-201ENST00000565815 C8orf87E5RJ46 101 aa2.34□□□□□ -2.03
LINC00561-201ENST00000565815 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
LINC00561-201ENST00000565815 MRPL34Q9BQ48 92 aaKnown RBP2.34□□□□□ -2.03
LINC00561-201ENST00000565815 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.04
LINC00561-201ENST00000565815 Q96NJ1 140 aa2.33□□□□□ -2.04
LINC00561-201ENST00000565815 PKHD1L1Q86WI1 4243 aa2.33□□□□□ -2.04
LINC00561-201ENST00000565815 A6NED7 52 aa2.33□□□□□ -2.04
LINC00561-201ENST00000565815 PSORS1C2Q9UIG4 136 aa2.33□□□□□ -2.04
LINC00561-201ENST00000565815 UBR4Q5T4S7 5183 aa2.33□□□□□ -2.04
LINC00561-201ENST00000565815 SPACA4Q8TDM5 124 aa2.33□□□□□ -2.04
LINC00561-201ENST00000565815 A0A0G2JQZ4 141 aa2.31□□□□□ -2.04
LINC00561-201ENST00000565815 A6NN06 94 aa2.31□□□□□ -2.04
LINC00561-201ENST00000565815 ACYP2P14621 99 aa2.31□□□□□ -2.04
LINC00561-201ENST00000565815 C7orf65Q6ZTY9 151 aa2.31□□□□□ -2.04
LINC00561-201ENST00000565815 SRRM2Q9UQ35 2752 aaKnown RBP2.31□□□□□ -2.04
LINC00561-201ENST00000565815 LCA10Q71F78 164 aa2.3□□□□□ -2.04
LINC00561-201ENST00000565815 SSBP3-AS1Q7Z2R9 100 aa2.3□□□□□ -2.04
LINC00561-201ENST00000565815 HRES1P13985 223 aa2.3□□□□□ -2.04
LINC00561-201ENST00000565815 CRCT1Q9UGL9 99 aa2.3□□□□□ -2.04
LINC00561-201ENST00000565815 IGHV6-1A0A0B4J1U7 121 aa2.29□□□□□ -2.04
LINC00561-201ENST00000565815 PCOTHQ58A44 107 aa2.29□□□□□ -2.04
LINC00561-201ENST00000565815 KRTAP13-3Q3SY46 172 aa2.29□□□□□ -2.04
LINC00561-201ENST00000565815 DMAC1Q96GE9 116 aa2.29□□□□□ -2.04
LINC00561-201ENST00000565815 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
LINC00561-201ENST00000565815 SPTSSBQ8NFR3 76 aa2.28□□□□□ -2.04
LINC00561-201ENST00000565815 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
LINC00561-201ENST00000565815 SPAG11AQ6PDA7 123 aa2.28□□□□□ -2.04
LINC00561-201ENST00000565815 Q5W150 140 aa2.27□□□□□ -2.05
LINC00561-201ENST00000565815 KRTAP5-4Q6L8H1 288 aa2.27□□□□□ -2.05
LINC00561-201ENST00000565815 FAT1Q14517 4588 aa2.27□□□□□ -2.05
LINC00561-201ENST00000565815 RBM12B-AS1Q9P1G2 102 aa2.26□□□□□ -2.05
LINC00561-201ENST00000565815 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
LINC00561-201ENST00000565815 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
LINC00561-201ENST00000565815 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
LINC00561-201ENST00000565815 IGLV7-43P04211 117 aa2.26□□□□□ -2.05
LINC00561-201ENST00000565815 SPATA8Q6RVD6 105 aa2.25□□□□□ -2.05
LINC00561-201ENST00000565815 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
LINC00561-201ENST00000565815 SPINK7P58062 85 aa2.25□□□□□ -2.05
LINC00561-201ENST00000565815 LINC00313P59037 77 aa2.25□□□□□ -2.05
LINC00561-201ENST00000565815 A0A1B0GU69 56 aa2.24□□□□□ -2.05
LINC00561-201ENST00000565815 UQCR11O14957 56 aa2.24□□□□□ -2.05
LINC00561-201ENST00000565815 TNXBP22105 4242 aa2.22□□□□□ -2.05
LINC00561-201ENST00000565815 RPS29P62273 56 aaKnown RBP2.22□□□□□ -2.05
LINC00561-201ENST00000565815 MIR22HGQ0VDD5 57 aa2.21□□□□□ -2.06
LINC00561-201ENST00000565815 TPRXLQ17RH7 258 aa2.2□□□□□ -2.06
LINC00561-201ENST00000565815 RETNLBQ9BQ08 111 aa2.2□□□□□ -2.06
LINC00561-201ENST00000565815 SPINK1P00995 79 aa2.19□□□□□ -2.06
LINC00561-201ENST00000565815 A8MUU9 505 aa2.18□□□□□ -2.06
LINC00561-201ENST00000565815 LRP1Q07954 4544 aaKnown RBP2.17□□□□□ -2.06
LINC00561-201ENST00000565815 LINC01554Q52M75 96 aa2.17□□□□□ -2.06
LINC00561-201ENST00000565815 FAT4Q6V0I7 4981 aa2.16□□□□□ -2.06
LINC00561-201ENST00000565815 KRTAP13-2Q52LG2 175 aa2.16□□□□□ -2.06
LINC00561-201ENST00000565815 LRP2P98164 4655 aa2.15□□□□□ -2.07
LINC00561-201ENST00000565815 LUZP6Q538Z0 58 aa2.13□□□□□ -2.07
LINC00561-201ENST00000565815 C20orf166-AS1Q96NR2 134 aa2.12□□□□□ -2.07
LINC00561-201ENST00000565815 K7ERS5 55 aa2.12□□□□□ -2.07
LINC00561-201ENST00000565815 LINC00304Q8N9R0 145 aa2.12□□□□□ -2.07
LINC00561-201ENST00000565815 KRTAP5-8O75690 187 aa2.11□□□□□ -2.07
LINC00561-201ENST00000565815 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
LINC00561-201ENST00000565815 PP632Q6XCG6 107 aa2.11□□□□□ -2.07
LINC00561-201ENST00000565815 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
LINC00561-201ENST00000565815 MUC17Q685J3 4493 aa2.1□□□□□ -2.07
LINC00561-201ENST00000565815 A0A1B0GU33 70 aa2.1□□□□□ -2.07
LINC00561-201ENST00000565815 H1FX-AS1Q4G0G2 97 aa2.1□□□□□ -2.07
LINC00561-201ENST00000565815 CSAG1Q6PB30 78 aa2.09□□□□□ -2.07
LINC00561-201ENST00000565815 KRTAP25-1Q3LHN0 102 aa2.09□□□□□ -2.08
LINC00561-201ENST00000565815 ADM2Q7Z4H4 148 aa2.09□□□□□ -2.08
LINC00561-201ENST00000565815 KRTAP10-10P60014 251 aa2.08□□□□□ -2.08
LINC00561-201ENST00000565815 H0YAA0 97 aa2.08□□□□□ -2.08
LINC00561-201ENST00000565815 COX6B2Q6YFQ2 88 aa2.07□□□□□ -2.08
LINC00561-201ENST00000565815 MT1HP80294 61 aa2.05□□□□□ -2.08
LINC00561-201ENST00000565815 ROMO1P60602 79 aa2.04□□□□□ -2.08
LINC00561-201ENST00000565815 M0R2T5 61 aa2.03□□□□□ -2.08
LINC00561-201ENST00000565815 RPL37P61927 97 aaKnown RBP2.03□□□□□ -2.09
LINC00561-201ENST00000565815 MUC2Q02817 5179 aa2.02□□□□□ -2.09
LINC00561-201ENST00000565815 KRTAP4-1Q9BYQ7 146 aa2.01□□□□□ -2.09
LINC00561-201ENST00000565815 KRTAP19-2Q3LHN2 52 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms