RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
VPS9D1-205ENST00000565452 SCGB1A1P11684 91 aa4.24□□□□□ -1.73
VPS9D1-205ENST00000565452 GPR98Q8WXG9 6306 aa4.23□□□□□ -1.73
VPS9D1-205ENST00000565452 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
VPS9D1-205ENST00000565452 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
VPS9D1-205ENST00000565452 SMIM20Q8N5G0 67 aa4.22□□□□□ -1.73
VPS9D1-205ENST00000565452 OCR1Q9BZK8 76 aa4.22□□□□□ -1.73
VPS9D1-205ENST00000565452 LOC101927531A0A1B0GV80 90 aa4.21□□□□□ -1.74
VPS9D1-205ENST00000565452 H0Y9P7 68 aa4.2□□□□□ -1.74
VPS9D1-205ENST00000565452 H3BPC8 53 aa4.2□□□□□ -1.74
VPS9D1-205ENST00000565452 MP68P56378 58 aa4.2□□□□□ -1.74
VPS9D1-205ENST00000565452 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
VPS9D1-205ENST00000565452 SPRR2EP22531 72 aa4.19□□□□□ -1.74
VPS9D1-205ENST00000565452 SPRR2BP35325 72 aa4.19□□□□□ -1.74
VPS9D1-205ENST00000565452 SPRR2AP35326 72 aa4.19□□□□□ -1.74
VPS9D1-205ENST00000565452 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
VPS9D1-205ENST00000565452 TRAV7A0A075B6U4 112 aa4.16□□□□□ -1.74
VPS9D1-205ENST00000565452 FAM236AA0A1B0GUQ0 79 aa4.16□□□□□ -1.74
VPS9D1-205ENST00000565452 FAM236BA0A1B0GV22 79 aa4.16□□□□□ -1.74
VPS9D1-205ENST00000565452 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
VPS9D1-205ENST00000565452 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
VPS9D1-205ENST00000565452 LINC00208Q96KT6 92 aa4.16□□□□□ -1.74
VPS9D1-205ENST00000565452 Q5VV11 94 aa4.15□□□□□ -1.75
VPS9D1-205ENST00000565452 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
VPS9D1-205ENST00000565452 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
VPS9D1-205ENST00000565452 MT1BP07438 61 aa4.12□□□□□ -1.75
VPS9D1-205ENST00000565452 A8MUN3 132 aa4.09□□□□□ -1.75
VPS9D1-205ENST00000565452 SERP2Q8N6R1 65 aa4.09□□□□□ -1.75
VPS9D1-205ENST00000565452 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
VPS9D1-205ENST00000565452 KLKP1Q107X0 134 aa4.07□□□□□ -1.76
VPS9D1-205ENST00000565452 SPRR2DP22532 72 aa4.06□□□□□ -1.76
VPS9D1-205ENST00000565452 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
VPS9D1-205ENST00000565452 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
VPS9D1-205ENST00000565452 S4R3F8 94 aa4.05□□□□□ -1.76
VPS9D1-205ENST00000565452 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
VPS9D1-205ENST00000565452 COX7CP15954 63 aa4.02□□□□□ -1.77
VPS9D1-205ENST00000565452 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
VPS9D1-205ENST00000565452 LCA10Q71F78 164 aa4□□□□□ -1.77
VPS9D1-205ENST00000565452 C20orf197Q8N268 126 aa4□□□□□ -1.77
VPS9D1-205ENST00000565452 NDUFC1O43677 76 aa3.99□□□□□ -1.77
VPS9D1-205ENST00000565452 ACYP2P14621 99 aa3.99□□□□□ -1.77
VPS9D1-205ENST00000565452 LCE3BQ5TA77 95 aa3.99□□□□□ -1.77
VPS9D1-205ENST00000565452 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
VPS9D1-205ENST00000565452 DMAC1Q96GE9 116 aa3.99□□□□□ -1.77
VPS9D1-205ENST00000565452 SNURFQ9Y675 71 aa3.99□□□□□ -1.77
VPS9D1-205ENST00000565452 ANAPC13Q9BS18 74 aa3.97□□□□□ -1.77
VPS9D1-205ENST00000565452 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
VPS9D1-205ENST00000565452 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
VPS9D1-205ENST00000565452 SPTSSBQ8NFR3 76 aa3.92□□□□□ -1.78
VPS9D1-205ENST00000565452 DSTQ03001 7570 aaKnown RBP3.91□□□□□ -1.78
VPS9D1-205ENST00000565452 H0YAA0 97 aa3.91□□□□□ -1.78
VPS9D1-205ENST00000565452 H7BZZ5 65 aa3.89□□□□□ -1.79
VPS9D1-205ENST00000565452 CHKB-CPT1BH3BT56 60 aa3.87□□□□□ -1.79
VPS9D1-205ENST00000565452 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
VPS9D1-205ENST00000565452 PRO2289Q9P1D8 64 aa3.87□□□□□ -1.79
VPS9D1-205ENST00000565452 CCDC179H3BU77 68 aa3.84□□□□□ -1.79
VPS9D1-205ENST00000565452 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
VPS9D1-205ENST00000565452 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
VPS9D1-205ENST00000565452 CYSTM1Q9H1C7 97 aa3.82□□□□□ -1.8
VPS9D1-205ENST00000565452 ADM2Q7Z4H4 148 aa3.81□□□□□ -1.8
VPS9D1-205ENST00000565452 COA5Q86WW8 74 aa3.81□□□□□ -1.8
VPS9D1-205ENST00000565452 KRTAP12-2P59991 146 aa3.78□□□□□ -1.8
VPS9D1-205ENST00000565452 TMEM258P61165 79 aa3.77□□□□□ -1.81
VPS9D1-205ENST00000565452 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
VPS9D1-205ENST00000565452 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
VPS9D1-205ENST00000565452 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
VPS9D1-205ENST00000565452 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
VPS9D1-205ENST00000565452 SEC61GP60059 68 aa3.74□□□□□ -1.81
VPS9D1-205ENST00000565452 MT1XP80297 61 aa3.74□□□□□ -1.81
VPS9D1-205ENST00000565452 R4GN34 69 aa3.74□□□□□ -1.81
VPS9D1-205ENST00000565452 P0C880 135 aa3.73□□□□□ -1.81
VPS9D1-205ENST00000565452 SERP1Q9Y6X1 66 aa3.72□□□□□ -1.81
VPS9D1-205ENST00000565452 AHNAK2Q8IVF2 5795 aa3.72□□□□□ -1.81
VPS9D1-205ENST00000565452 M0QZ58 72 aa3.71□□□□□ -1.82
VPS9D1-205ENST00000565452 PLAC4Q8WY50 150 aa3.71□□□□□ -1.82
VPS9D1-205ENST00000565452 LCE1DQ5T752 114 aa3.68□□□□□ -1.82
VPS9D1-205ENST00000565452 PCP4P48539 62 aa3.66□□□□□ -1.82
VPS9D1-205ENST00000565452 KRTAP5-10Q6L8G5 202 aa3.66□□□□□ -1.82
VPS9D1-205ENST00000565452 A0A1B0GU69 56 aa3.64□□□□□ -1.83
VPS9D1-205ENST00000565452 PRR15LQ9BU68 103 aa3.63□□□□□ -1.83
VPS9D1-205ENST00000565452 A0A1B0GU33 70 aa3.62□□□□□ -1.83
VPS9D1-205ENST00000565452 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
VPS9D1-205ENST00000565452 LINC01558Q9Y6Z2 57 aa3.61□□□□□ -1.83
VPS9D1-205ENST00000565452 MT4P47944 62 aa3.59□□□□□ -1.83
VPS9D1-205ENST00000565452 LINC01554Q52M75 96 aa3.59□□□□□ -1.83
VPS9D1-205ENST00000565452 V9GYY9 64 aa3.59□□□□□ -1.83
VPS9D1-205ENST00000565452 KRTAP10-12P60413 245 aa3.57□□□□□ -1.84
VPS9D1-205ENST00000565452 RPS28P62857 69 aaKnown RBP3.57□□□□□ -1.84
VPS9D1-205ENST00000565452 LCE4AQ5TA78 99 aa3.57□□□□□ -1.84
VPS9D1-205ENST00000565452 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
VPS9D1-205ENST00000565452 SMIM26A0A096LP01 95 aa3.55□□□□□ -1.84
VPS9D1-205ENST00000565452 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
VPS9D1-205ENST00000565452 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
VPS9D1-205ENST00000565452 Q1T7F1 81 aa3.53□□□□□ -1.84
VPS9D1-205ENST00000565452 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
VPS9D1-205ENST00000565452 UQCR11O14957 56 aa3.51□□□□□ -1.85
VPS9D1-205ENST00000565452 SPATA8Q6RVD6 105 aa3.51□□□□□ -1.85
VPS9D1-205ENST00000565452 A0A0D9SG42 100 aa3.47□□□□□ -1.85
VPS9D1-205ENST00000565452 KRTAP5-3Q6L8H2 238 aa3.47□□□□□ -1.85
VPS9D1-205ENST00000565452 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms