RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SCGB1A1P11684 91 aa6.36□□□□□ -1.39
VPS9D1-204ENST00000565023 MP68P56378 58 aa6.36□□□□□ -1.39
VPS9D1-204ENST00000565023 S4R3F8 94 aa6.34□□□□□ -1.39
VPS9D1-204ENST00000565023 FAM236AA0A1B0GUQ0 79 aa6.32□□□□□ -1.4
VPS9D1-204ENST00000565023 FAM236BA0A1B0GV22 79 aa6.32□□□□□ -1.4
VPS9D1-204ENST00000565023 H3BPC8 53 aa6.32□□□□□ -1.4
VPS9D1-204ENST00000565023 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
VPS9D1-204ENST00000565023 LCA10Q71F78 164 aa6.31□□□□□ -1.4
VPS9D1-204ENST00000565023 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
VPS9D1-204ENST00000565023 MUC12Q9UKN1 5478 aa6.28□□□□□ -1.4
VPS9D1-204ENST00000565023 NEBP20929 6669 aa6.28□□□□□ -1.4
VPS9D1-204ENST00000565023 CSAG1Q6PB30 78 aa6.27□□□□□ -1.41
VPS9D1-204ENST00000565023 SMIM20Q8N5G0 67 aa6.27□□□□□ -1.41
VPS9D1-204ENST00000565023 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
VPS9D1-204ENST00000565023 A8MUN3 132 aa6.26□□□□□ -1.41
VPS9D1-204ENST00000565023 TRAV7A0A075B6U4 112 aa6.25□□□□□ -1.41
VPS9D1-204ENST00000565023 KRTAP20-1Q3LI63 56 aa6.19□□□□□ -1.42
VPS9D1-204ENST00000565023 NDUFC1O43677 76 aa6.16□□□□□ -1.42
VPS9D1-204ENST00000565023 DMAC1Q96GE9 116 aa6.15□□□□□ -1.42
VPS9D1-204ENST00000565023 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
VPS9D1-204ENST00000565023 Q5VV11 94 aa6.11□□□□□ -1.43
VPS9D1-204ENST00000565023 MT1BP07438 61 aa6.1□□□□□ -1.43
VPS9D1-204ENST00000565023 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
VPS9D1-204ENST00000565023 H0YAA0 97 aa6.08□□□□□ -1.44
VPS9D1-204ENST00000565023 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
VPS9D1-204ENST00000565023 A6NN06 94 aa6.07□□□□□ -1.44
VPS9D1-204ENST00000565023 KRTAP19-8Q3LI54 63 aa6.06□□□□□ -1.44
VPS9D1-204ENST00000565023 C20orf197Q8N268 126 aa6.06□□□□□ -1.44
VPS9D1-204ENST00000565023 ACYP2P14621 99 aa6.03□□□□□ -1.44
VPS9D1-204ENST00000565023 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
VPS9D1-204ENST00000565023 SPANXA2-OT1Q8N9U9 137 aa6□□□□□ -1.45
VPS9D1-204ENST00000565023 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
VPS9D1-204ENST00000565023 ADM2Q7Z4H4 148 aa5.99□□□□□ -1.45
VPS9D1-204ENST00000565023 COX7CP15954 63 aa5.98□□□□□ -1.45
VPS9D1-204ENST00000565023 KMT2DO14686 5537 aa5.96□□□□□ -1.45
VPS9D1-204ENST00000565023 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
VPS9D1-204ENST00000565023 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
VPS9D1-204ENST00000565023 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.46
VPS9D1-204ENST00000565023 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
VPS9D1-204ENST00000565023 P0C880 135 aa5.89□□□□□ -1.47
VPS9D1-204ENST00000565023 ANAPC13Q9BS18 74 aa5.87□□□□□ -1.47
VPS9D1-204ENST00000565023 CYSTM1Q9H1C7 97 aa5.86□□□□□ -1.47
VPS9D1-204ENST00000565023 H7BZZ5 65 aa5.85□□□□□ -1.47
VPS9D1-204ENST00000565023 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
VPS9D1-204ENST00000565023 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
VPS9D1-204ENST00000565023 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
VPS9D1-204ENST00000565023 R4GN34 69 aa5.82□□□□□ -1.48
VPS9D1-204ENST00000565023 COA5Q86WW8 74 aa5.8□□□□□ -1.48
VPS9D1-204ENST00000565023 M0QZ58 72 aa5.79□□□□□ -1.48
VPS9D1-204ENST00000565023 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
VPS9D1-204ENST00000565023 CCDC179H3BU77 68 aa5.76□□□□□ -1.49
VPS9D1-204ENST00000565023 LINC01554Q52M75 96 aa5.75□□□□□ -1.49
VPS9D1-204ENST00000565023 PRO2289Q9P1D8 64 aa5.73□□□□□ -1.49
VPS9D1-204ENST00000565023 MT1XP80297 61 aa5.72□□□□□ -1.49
VPS9D1-204ENST00000565023 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
VPS9D1-204ENST00000565023 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
VPS9D1-204ENST00000565023 ATP5EP56381 51 aaPredicted RBP5.62□□□□□ -1.51
VPS9D1-204ENST00000565023 SEC61GP60059 68 aa5.61□□□□□ -1.51
VPS9D1-204ENST00000565023 GPR98Q8WXG9 6306 aa5.61□□□□□ -1.51
VPS9D1-204ENST00000565023 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
VPS9D1-204ENST00000565023 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
VPS9D1-204ENST00000565023 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
VPS9D1-204ENST00000565023 KRTAP8-1Q8IUC2 63 aa5.58□□□□□ -1.52
VPS9D1-204ENST00000565023 TMEM258P61165 79 aa5.55□□□□□ -1.52
VPS9D1-204ENST00000565023 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
VPS9D1-204ENST00000565023 SPRR2EP22531 72 aa5.53□□□□□ -1.52
VPS9D1-204ENST00000565023 SPRR2BP35325 72 aa5.53□□□□□ -1.52
VPS9D1-204ENST00000565023 SPRR2AP35326 72 aa5.53□□□□□ -1.52
VPS9D1-204ENST00000565023 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
VPS9D1-204ENST00000565023 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
VPS9D1-204ENST00000565023 A0A1B0GU33 70 aa5.51□□□□□ -1.53
VPS9D1-204ENST00000565023 A0A1B0GU69 56 aa5.49□□□□□ -1.53
VPS9D1-204ENST00000565023 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
VPS9D1-204ENST00000565023 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
VPS9D1-204ENST00000565023 A0A0D9SG42 100 aa5.42□□□□□ -1.54
VPS9D1-204ENST00000565023 LINC01558Q9Y6Z2 57 aa5.41□□□□□ -1.54
VPS9D1-204ENST00000565023 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
VPS9D1-204ENST00000565023 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
VPS9D1-204ENST00000565023 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
VPS9D1-204ENST00000565023 CAMK2N1Q7Z7J9 78 aa5.37□□□□□ -1.55
VPS9D1-204ENST00000565023 PCP4P48539 62 aa5.36□□□□□ -1.55
VPS9D1-204ENST00000565023 SMIM26A0A096LP01 95 aa5.35□□□□□ -1.55
VPS9D1-204ENST00000565023 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
VPS9D1-204ENST00000565023 SPRR2DP22532 72 aa5.34□□□□□ -1.55
VPS9D1-204ENST00000565023 SPINT4Q6UDR6 99 aa5.33□□□□□ -1.56
VPS9D1-204ENST00000565023 A8MU10 97 aa5.3□□□□□ -1.56
VPS9D1-204ENST00000565023 LCE3BQ5TA77 95 aa5.25□□□□□ -1.57
VPS9D1-204ENST00000565023 UQCR11O14957 56 aa5.23□□□□□ -1.57
VPS9D1-204ENST00000565023 V9GYY9 64 aa5.21□□□□□ -1.58
VPS9D1-204ENST00000565023 Q1T7F1 81 aa5.2□□□□□ -1.58
VPS9D1-204ENST00000565023 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
VPS9D1-204ENST00000565023 PSPHP1O15172 72 aa5.14□□□□□ -1.59
VPS9D1-204ENST00000565023 RPS28P62857 69 aaKnown RBP5.12□□□□□ -1.59
VPS9D1-204ENST00000565023 MIR22HGQ0VDD5 57 aa5.12□□□□□ -1.59
VPS9D1-204ENST00000565023 KRTAP19-7Q3SYF9 63 aa5.1□□□□□ -1.59
VPS9D1-204ENST00000565023 C10orf95Q9H7T3 257 aa5.09□□□□□ -1.59
VPS9D1-204ENST00000565023 KRTAP4-9Q9BYQ8 210 aa5.08□□□□□ -1.6
VPS9D1-204ENST00000565023 MT1EP04732 61 aa5.07□□□□□ -1.6
VPS9D1-204ENST00000565023 TNP1P09430 55 aa5.02□□□□□ -1.61
VPS9D1-204ENST00000565023 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms