RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 KRTAP9-7A8MTY7 169 aa3.23□□□□□ -1.89
TUBGCP4-207ENST00000563963 IGKV2-30P06310 120 aa3.23□□□□□ -1.89
TUBGCP4-207ENST00000563963 IGKV2D-30A0A075B6S6 120 aa3.22□□□□□ -1.89
TUBGCP4-207ENST00000563963 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
TUBGCP4-207ENST00000563963 APLNQ9ULZ1 77 aa3.18□□□□□ -1.9
TUBGCP4-207ENST00000563963 SPINK6Q6UWN8 80 aa3.18□□□□□ -1.9
TUBGCP4-207ENST00000563963 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
TUBGCP4-207ENST00000563963 Q6ZRN7 208 aaPredicted RBP3.17□□□□□ -1.9
TUBGCP4-207ENST00000563963 KRTAP7-1Q8IUC3 87 aa3.16□□□□□ -1.9
TUBGCP4-207ENST00000563963 RYR1P21817 5038 aa3.16□□□□□ -1.9
TUBGCP4-207ENST00000563963 KRTAP10-11P60412 298 aa3.16□□□□□ -1.9
TUBGCP4-207ENST00000563963 KRTAP13-3Q3SY46 172 aa3.16□□□□□ -1.9
TUBGCP4-207ENST00000563963 DNAH5Q8TE73 4624 aa3.13□□□□□ -1.91
TUBGCP4-207ENST00000563963 UBR4Q5T4S7 5183 aa3.13□□□□□ -1.91
TUBGCP4-207ENST00000563963 PP632Q6XCG6 107 aa3.12□□□□□ -1.91
TUBGCP4-207ENST00000563963 RYR3Q15413 4870 aa3.11□□□□□ -1.91
TUBGCP4-207ENST00000563963 A0A0D9SG42 100 aa3.11□□□□□ -1.91
TUBGCP4-207ENST00000563963 PCLOQ9Y6V0 5065 aa3.11□□□□□ -1.91
TUBGCP4-207ENST00000563963 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
TUBGCP4-207ENST00000563963 ZANQ9Y493 2812 aa3.1□□□□□ -1.91
TUBGCP4-207ENST00000563963 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
TUBGCP4-207ENST00000563963 KRTAP13-1Q8IUC0 172 aa3.07□□□□□ -1.92
TUBGCP4-207ENST00000563963 XP32Q5T750 250 aa3.06□□□□□ -1.92
TUBGCP4-207ENST00000563963 S4R3F8 94 aa3.05□□□□□ -1.92
TUBGCP4-207ENST00000563963 KRTAP12-2P59991 146 aa3.03□□□□□ -1.93
TUBGCP4-207ENST00000563963 KRTAP1-5Q9BYS1 174 aa3.02□□□□□ -1.93
TUBGCP4-207ENST00000563963 HERC2O95714 4834 aa3.01□□□□□ -1.93
TUBGCP4-207ENST00000563963 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
TUBGCP4-207ENST00000563963 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
TUBGCP4-207ENST00000563963 HERC1Q15751 4861 aa2.99□□□□□ -1.93
TUBGCP4-207ENST00000563963 A0A1B0GVY2 172 aa2.98□□□□□ -1.93
TUBGCP4-207ENST00000563963 APOBP04114 4563 aaKnown RBP2.98□□□□□ -1.93
TUBGCP4-207ENST00000563963 PLECQ15149 4684 aaKnown RBP2.96□□□□□ -1.94
TUBGCP4-207ENST00000563963 RYR2Q92736 4967 aa2.94□□□□□ -1.94
TUBGCP4-207ENST00000563963 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
TUBGCP4-207ENST00000563963 KRTAP9-4Q9BYQ2 154 aa2.94□□□□□ -1.94
TUBGCP4-207ENST00000563963 Q5VSD8 79 aa2.94□□□□□ -1.94
TUBGCP4-207ENST00000563963 SRRM2Q9UQ35 2752 aaKnown RBP2.93□□□□□ -1.94
TUBGCP4-207ENST00000563963 FAT1Q14517 4588 aa2.93□□□□□ -1.94
TUBGCP4-207ENST00000563963 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
TUBGCP4-207ENST00000563963 KRTAP20-1Q3LI63 56 aa2.92□□□□□ -1.94
TUBGCP4-207ENST00000563963 KRTAP4-5Q9BYR2 181 aa2.92□□□□□ -1.94
TUBGCP4-207ENST00000563963 KRTAP3-1Q9BYR8 98 aa2.91□□□□□ -1.94
TUBGCP4-207ENST00000563963 LRP1Q07954 4544 aaKnown RBP2.89□□□□□ -1.95
TUBGCP4-207ENST00000563963 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.88□□□□□ -1.95
TUBGCP4-207ENST00000563963 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
TUBGCP4-207ENST00000563963 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
TUBGCP4-207ENST00000563963 KRTAP10-2P60368 255 aa2.85□□□□□ -1.95
TUBGCP4-207ENST00000563963 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
TUBGCP4-207ENST00000563963 DYNC1H1Q14204 4646 aaKnown RBP2.84□□□□□ -1.95
TUBGCP4-207ENST00000563963 KRTAP12-1P59990 96 aa2.84□□□□□ -1.96
TUBGCP4-207ENST00000563963 M0QZ58 72 aa2.83□□□□□ -1.96
TUBGCP4-207ENST00000563963 C9orf92A6NGG3 77 aa2.82□□□□□ -1.96
TUBGCP4-207ENST00000563963 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
TUBGCP4-207ENST00000563963 EPPK1P58107 5090 aaKnown RBP2.8□□□□□ -1.96
TUBGCP4-207ENST00000563963 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
TUBGCP4-207ENST00000563963 KMT2CQ8NEZ4 4911 aaKnown RBP2.79□□□□□ -1.96
TUBGCP4-207ENST00000563963 STARD9Q9P2P6 4700 aa2.78□□□□□ -1.96
TUBGCP4-207ENST00000563963 LCE4AQ5TA78 99 aa2.77□□□□□ -1.97
TUBGCP4-207ENST00000563963 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
TUBGCP4-207ENST00000563963 SMR3BP02814 79 aaPredicted RBP2.76□□□□□ -1.97
TUBGCP4-207ENST00000563963 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
TUBGCP4-207ENST00000563963 LRP1BQ9NZR2 4599 aa2.74□□□□□ -1.97
TUBGCP4-207ENST00000563963 KRTAP10-1P60331 282 aa2.74□□□□□ -1.97
TUBGCP4-207ENST00000563963 LPAP08519 4548 aa2.71□□□□□ -1.98
TUBGCP4-207ENST00000563963 SYNE2Q8WXH0 6885 aaKnown RBP2.71□□□□□ -1.98
TUBGCP4-207ENST00000563963 M0R2T5 61 aa2.7□□□□□ -1.98
TUBGCP4-207ENST00000563963 NEBP20929 6669 aa2.69□□□□□ -1.98
TUBGCP4-207ENST00000563963 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
TUBGCP4-207ENST00000563963 MUC17Q685J3 4493 aa2.62□□□□□ -1.99
TUBGCP4-207ENST00000563963 LCE5AQ5TCM9 118 aa2.62□□□□□ -1.99
TUBGCP4-207ENST00000563963 FSIP2Q5CZC0 6907 aa2.6□□□□□ -1.99
TUBGCP4-207ENST00000563963 KRTAP10-4P60372 401 aaPredicted RBP2.6□□□□□ -1.99
TUBGCP4-207ENST00000563963 TNP1P09430 55 aa2.59□□□□□ -1.99
TUBGCP4-207ENST00000563963 KRTAP2-3P0C7H8 128 aa2.58□□□□□ -2
TUBGCP4-207ENST00000563963 KRTAP2-4Q9BYR9 128 aa2.58□□□□□ -2
TUBGCP4-207ENST00000563963 MUC2Q02817 5179 aa2.57□□□□□ -2
TUBGCP4-207ENST00000563963 MT1HL1P0DM35 61 aa2.56□□□□□ -2
TUBGCP4-207ENST00000563963 KRTAP6-3Q3LI67 103 aa2.54□□□□□ -2
TUBGCP4-207ENST00000563963 KRTAP19-1Q8IUB9 90 aa2.52□□□□□ -2.01
TUBGCP4-207ENST00000563963 RNF213Q63HN8 5207 aa2.46□□□□□ -2.02
TUBGCP4-207ENST00000563963 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
TUBGCP4-207ENST00000563963 HMCN2Q8NDA2 5059 aa2.43□□□□□ -2.02
TUBGCP4-207ENST00000563963 KRTAP2-2Q9BYT5 123 aa2.43□□□□□ -2.02
TUBGCP4-207ENST00000563963 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
TUBGCP4-207ENST00000563963 FAT4Q6V0I7 4981 aa2.43□□□□□ -2.02
TUBGCP4-207ENST00000563963 KRTAP9-3Q9BYQ3 159 aa2.42□□□□□ -2.02
TUBGCP4-207ENST00000563963 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
TUBGCP4-207ENST00000563963 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
TUBGCP4-207ENST00000563963 KRTAP19-4Q3LI73 84 aa2.34□□□□□ -2.03
TUBGCP4-207ENST00000563963 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
TUBGCP4-207ENST00000563963 LRP2P98164 4655 aa2.3□□□□□ -2.04
TUBGCP4-207ENST00000563963 KMT2DO14686 5537 aa2.27□□□□□ -2.05
TUBGCP4-207ENST00000563963 LCE1AQ5T7P2 110 aa2.24□□□□□ -2.05
TUBGCP4-207ENST00000563963 LOC100996750A0A140TA64 210 aa2.23□□□□□ -2.05
TUBGCP4-207ENST00000563963 KRTAP4-6Q9BYQ5 205 aa2.23□□□□□ -2.05
TUBGCP4-207ENST00000563963 MT3P25713 68 aa2.22□□□□□ -2.05
TUBGCP4-207ENST00000563963 SPRR2EP22531 72 aa2.2□□□□□ -2.06
TUBGCP4-207ENST00000563963 SPRR2BP35325 72 aa2.2□□□□□ -2.06
TUBGCP4-207ENST00000563963 SPRR2AP35326 72 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms