RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 NREPQ16612 68 aa2.32□□□□□ -2.04
SMG1-206ENST00000562668 PRR15Q8IV56 129 aa2.32□□□□□ -2.04
SMG1-206ENST00000562668 C8orf17Q9NRJ1 99 aa2.32□□□□□ -2.04
SMG1-206ENST00000562668 K7EQZ3 153 aa2.31□□□□□ -2.04
SMG1-206ENST00000562668 FAM240AA0A1B0GVK7 77 aa2.29□□□□□ -2.04
SMG1-206ENST00000562668 BPY2O14599 106 aa2.29□□□□□ -2.04
SMG1-206ENST00000562668 NDUFB1O75438 58 aa2.29□□□□□ -2.04
SMG1-206ENST00000562668 ATP11AUNQ6ZP68 121 aa2.28□□□□□ -2.04
SMG1-206ENST00000562668 TMEM254Q8TBM7 123 aa2.28□□□□□ -2.04
SMG1-206ENST00000562668 ACYP1P07311 99 aa2.27□□□□□ -2.05
SMG1-206ENST00000562668 HRES1P13985 223 aa2.27□□□□□ -2.05
SMG1-206ENST00000562668 MT1HP80294 61 aa2.27□□□□□ -2.05
SMG1-206ENST00000562668 ZCCHC13Q8WW36 166 aaKnown RBP2.27□□□□□ -2.05
SMG1-206ENST00000562668 MRPL34Q9BQ48 92 aaKnown RBP2.27□□□□□ -2.05
SMG1-206ENST00000562668 UBL5Q9BZL1 73 aa2.27□□□□□ -2.05
SMG1-206ENST00000562668 hDV103S1A0JD37 113 aa2.26□□□□□ -2.05
SMG1-206ENST00000562668 Q5W150 140 aa2.26□□□□□ -2.05
SMG1-206ENST00000562668 WFDC13Q8IUB5 93 aa2.25□□□□□ -2.05
SMG1-206ENST00000562668 A0A0U1RQV1 116 aa2.24□□□□□ -2.05
SMG1-206ENST00000562668 HCG22E2RYF7 251 aa2.24□□□□□ -2.05
SMG1-206ENST00000562668 CASC2Q6XLA1 102 aa2.24□□□□□ -2.05
SMG1-206ENST00000562668 SPINK7P58062 85 aa2.23□□□□□ -2.05
SMG1-206ENST00000562668 ATP5EP2Q5VTU8 51 aa2.23□□□□□ -2.05
SMG1-206ENST00000562668 LINC00643Q86TS7 51 aa2.23□□□□□ -2.05
SMG1-206ENST00000562668 A0A087WVE0 104 aa2.21□□□□□ -2.06
SMG1-206ENST00000562668 NDUFS5O43920 106 aa2.2□□□□□ -2.06
SMG1-206ENST00000562668 USH2AO75445 5202 aa2.18□□□□□ -2.06
SMG1-206ENST00000562668 J3QR89 54 aa2.18□□□□□ -2.06
SMG1-206ENST00000562668 HIST1H4AP62805 103 aaKnown RBP2.18□□□□□ -2.06
SMG1-206ENST00000562668 COX6B2Q6YFQ2 88 aa2.18□□□□□ -2.06
SMG1-206ENST00000562668 TP53AIP1Q9HCN2 124 aa2.18□□□□□ -2.06
SMG1-206ENST00000562668 K7ERU9 68 aa2.17□□□□□ -2.06
SMG1-206ENST00000562668 MT-ATP8P03928 68 aa2.17□□□□□ -2.06
SMG1-206ENST00000562668 C7orf65Q6ZTY9 151 aa2.17□□□□□ -2.06
SMG1-206ENST00000562668 SSPOA2VEC9 5147 aa2.16□□□□□ -2.06
SMG1-206ENST00000562668 CAMK2N1Q7Z7J9 78 aa2.16□□□□□ -2.06
SMG1-206ENST00000562668 RBM12B-AS1Q9P1G2 102 aa2.16□□□□□ -2.06
SMG1-206ENST00000562668 TRAV22A0A0B4J277 110 aa2.15□□□□□ -2.07
SMG1-206ENST00000562668 UQCRQO14949 82 aa2.15□□□□□ -2.07
SMG1-206ENST00000562668 IMUPQ9GZP8 106 aa2.15□□□□□ -2.07
SMG1-206ENST00000562668 CYP4F30PQ9H0H9 118 aa2.15□□□□□ -2.07
SMG1-206ENST00000562668 FAM236DA0A1B0GTK5 79 aa2.14□□□□□ -2.07
SMG1-206ENST00000562668 MT2AP02795 61 aa2.14□□□□□ -2.07
SMG1-206ENST00000562668 FAM236CP0DP71 79 aa2.14□□□□□ -2.07
SMG1-206ENST00000562668 C4orf26Q17RF5 130 aa2.14□□□□□ -2.07
SMG1-206ENST00000562668 KRTAP21-2Q3LI59 83 aa2.14□□□□□ -2.07
SMG1-206ENST00000562668 LOC101927531A0A1B0GV80 90 aa2.13□□□□□ -2.07
SMG1-206ENST00000562668 H0Y9P7 68 aa2.13□□□□□ -2.07
SMG1-206ENST00000562668 M0R2T5 61 aa2.13□□□□□ -2.07
SMG1-206ENST00000562668 MT1FP04733 61 aa2.13□□□□□ -2.07
SMG1-206ENST00000562668 H1FX-AS1Q4G0G2 97 aa2.13□□□□□ -2.07
SMG1-206ENST00000562668 KLKP1Q107X0 134 aa2.12□□□□□ -2.07
SMG1-206ENST00000562668 ATOX1O00244 68 aa2.11□□□□□ -2.07
SMG1-206ENST00000562668 C1orf64Q8NEQ6 169 aa2.11□□□□□ -2.07
SMG1-206ENST00000562668 FSIP2Q5CZC0 6907 aa2.11□□□□□ -2.07
SMG1-206ENST00000562668 FAM236AA0A1B0GUQ0 79 aa2.1□□□□□ -2.07
SMG1-206ENST00000562668 FAM236BA0A1B0GV22 79 aa2.1□□□□□ -2.07
SMG1-206ENST00000562668 C5orf47Q569G3 176 aa2.1□□□□□ -2.07
SMG1-206ENST00000562668 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
SMG1-206ENST00000562668 H3BPC8 53 aa2.09□□□□□ -2.07
SMG1-206ENST00000562668 LCA10Q71F78 164 aa2.09□□□□□ -2.07
SMG1-206ENST00000562668 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.08
SMG1-206ENST00000562668 TRAV7A0A075B6U4 112 aa2.08□□□□□ -2.08
SMG1-206ENST00000562668 MP68P56378 58 aa2.08□□□□□ -2.08
SMG1-206ENST00000562668 SCGB1A1P11684 91 aa2.07□□□□□ -2.08
SMG1-206ENST00000562668 S4R3F8 94 aa2.07□□□□□ -2.08
SMG1-206ENST00000562668 SMIM20Q8N5G0 67 aa2.06□□□□□ -2.08
SMG1-206ENST00000562668 A8MUN3 132 aa2.05□□□□□ -2.08
SMG1-206ENST00000562668 DMAC1Q96GE9 116 aa2.05□□□□□ -2.08
SMG1-206ENST00000562668 SERP2Q8N6R1 65 aa2.04□□□□□ -2.08
SMG1-206ENST00000562668 CSAG1Q6PB30 78 aa2.03□□□□□ -2.08
SMG1-206ENST00000562668 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
SMG1-206ENST00000562668 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
SMG1-206ENST00000562668 C20orf197Q8N268 126 aa2.02□□□□□ -2.09
SMG1-206ENST00000562668 CYSTM1Q9H1C7 97 aa2.02□□□□□ -2.09
SMG1-206ENST00000562668 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
SMG1-206ENST00000562668 H0YAA0 97 aa2.01□□□□□ -2.09
SMG1-206ENST00000562668 COX7CP15954 63 aa2.01□□□□□ -2.09
SMG1-206ENST00000562668 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
SMG1-206ENST00000562668 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
SMG1-206ENST00000562668 NDUFC1O43677 76 aa1.99□□□□□ -2.09
SMG1-206ENST00000562668 MT1BP07438 61 aa1.99□□□□□ -2.09
SMG1-206ENST00000562668 KRTAP19-8Q3LI54 63 aa1.99□□□□□ -2.09
SMG1-206ENST00000562668 H7BZZ5 65 aa1.98□□□□□ -2.09
SMG1-206ENST00000562668 KRTAP19-6Q3LI70 58 aa1.98□□□□□ -2.09
SMG1-206ENST00000562668 ACYP2P14621 99 aa1.97□□□□□ -2.09
SMG1-206ENST00000562668 CCDC179H3BU77 68 aa1.96□□□□□ -2.1
SMG1-206ENST00000562668 P0C880 135 aa1.96□□□□□ -2.1
SMG1-206ENST00000562668 KRTAP12-4P60329 112 aa1.96□□□□□ -2.1
SMG1-206ENST00000562668 ADM2Q7Z4H4 148 aa1.96□□□□□ -2.1
SMG1-206ENST00000562668 CRIPTQ9P021 101 aa1.96□□□□□ -2.1
SMG1-206ENST00000562668 ANAPC13Q9BS18 74 aa1.95□□□□□ -2.1
SMG1-206ENST00000562668 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
SMG1-206ENST00000562668 COA5Q86WW8 74 aa1.93□□□□□ -2.1
SMG1-206ENST00000562668 SYNE2Q8WXH0 6885 aaKnown RBP1.93□□□□□ -2.1
SMG1-206ENST00000562668 KRTAP12-3P60328 96 aa1.92□□□□□ -2.1
SMG1-206ENST00000562668 Q5VV11 94 aa1.92□□□□□ -2.1
SMG1-206ENST00000562668 CHKB-CPT1BH3BT56 60 aa1.9□□□□□ -2.11
SMG1-206ENST00000562668 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
SMG1-206ENST00000562668 SPTSSBQ8NFR3 76 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 209.7 ms