RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 UQCR11O14957 56 aa9.69□□□□□ -0.86
LINC01225-201ENST00000562271 MIR22HGQ0VDD5 57 aa9.69□□□□□ -0.86
LINC01225-201ENST00000562271 SPINK1P00995 79 aa9.66□□□□□ -0.86
LINC01225-201ENST00000562271 IGKV2D-30A0A075B6S6 120 aa9.65□□□□□ -0.86
LINC01225-201ENST00000562271 KRTAP10-8P60410 259 aa9.65□□□□□ -0.87
LINC01225-201ENST00000562271 CSAG1Q6PB30 78 aa9.61□□□□□ -0.87
LINC01225-201ENST00000562271 LINC00304Q8N9R0 145 aa9.59□□□□□ -0.87
LINC01225-201ENST00000562271 LPAP08519 4548 aa9.57□□□□□ -0.88
LINC01225-201ENST00000562271 RPS29P62273 56 aaKnown RBP9.53□□□□□ -0.88
LINC01225-201ENST00000562271 J3QL48 77 aa9.48□□□□□ -0.89
LINC01225-201ENST00000562271 LRP2P98164 4655 aa9.42□□□□□ -0.9
LINC01225-201ENST00000562271 C9orf92A6NGG3 77 aa9.35□□□□□ -0.91
LINC01225-201ENST00000562271 KRTAP25-1Q3LHN0 102 aa9.34□□□□□ -0.91
LINC01225-201ENST00000562271 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
LINC01225-201ENST00000562271 A8MUU9 505 aa9.34□□□□□ -0.91
LINC01225-201ENST00000562271 HMCN2Q8NDA2 5059 aa9.34□□□□□ -0.91
LINC01225-201ENST00000562271 ROMO1P60602 79 aa9.33□□□□□ -0.92
LINC01225-201ENST00000562271 KRTAP3-1Q9BYR8 98 aa9.2□□□□□ -0.94
LINC01225-201ENST00000562271 UBR4Q5T4S7 5183 aa9.18□□□□□ -0.94
LINC01225-201ENST00000562271 MUC2Q02817 5179 aa9.17□□□□□ -0.94
LINC01225-201ENST00000562271 H0YAA0 97 aa9.17□□□□□ -0.94
LINC01225-201ENST00000562271 RNF213Q63HN8 5207 aa9.09□□□□□ -0.95
LINC01225-201ENST00000562271 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
LINC01225-201ENST00000562271 XP32Q5T750 250 aa9.06□□□□□ -0.96
LINC01225-201ENST00000562271 A0A1B0GU33 70 aa9.06□□□□□ -0.96
LINC01225-201ENST00000562271 P0C880 135 aa9.02□□□□□ -0.97
LINC01225-201ENST00000562271 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
LINC01225-201ENST00000562271 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
LINC01225-201ENST00000562271 K7ERS5 55 aa8.98□□□□□ -0.97
LINC01225-201ENST00000562271 RPL37P61927 97 aaKnown RBP8.89□□□□□ -0.99
LINC01225-201ENST00000562271 KRTAP4-1Q9BYQ7 146 aa8.87□□□□□ -0.99
LINC01225-201ENST00000562271 MUC17Q685J3 4493 aa8.85□□□□□ -0.99
LINC01225-201ENST00000562271 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
LINC01225-201ENST00000562271 KRTAP3-3Q9BYR6 98 aa8.81□□□□□ -1
LINC01225-201ENST00000562271 FAT4Q6V0I7 4981 aa8.78□□□□□ -1
LINC01225-201ENST00000562271 KRTAP10-6P60371 365 aaPredicted RBP8.75□□□□□ -1.01
LINC01225-201ENST00000562271 SPINT4Q6UDR6 99 aa8.75□□□□□ -1.01
LINC01225-201ENST00000562271 S4R3F8 94 aa8.74□□□□□ -1.01
LINC01225-201ENST00000562271 KRTAP3-2Q9BYR7 98 aa8.68□□□□□ -1.02
LINC01225-201ENST00000562271 KRTAP15-1Q3LI76 137 aa8.67□□□□□ -1.02
LINC01225-201ENST00000562271 KRTAP13-4Q3LI77 160 aa8.65□□□□□ -1.02
LINC01225-201ENST00000562271 SEC61BP60468 96 aaKnown RBP8.64□□□□□ -1.03
LINC01225-201ENST00000562271 NDUFAF8A1L188 74 aa8.63□□□□□ -1.03
LINC01225-201ENST00000562271 A0A0D9SG42 100 aa8.6□□□□□ -1.03
LINC01225-201ENST00000562271 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
LINC01225-201ENST00000562271 C10orf95Q9H7T3 257 aa8.46□□□□□ -1.05
LINC01225-201ENST00000562271 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
LINC01225-201ENST00000562271 KRTAP12-2P59991 146 aa8.38□□□□□ -1.07
LINC01225-201ENST00000562271 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
LINC01225-201ENST00000562271 A0A0A0MQY5 61 aa8.34□□□□□ -1.07
LINC01225-201ENST00000562271 M0QZ58 72 aa8.34□□□□□ -1.07
LINC01225-201ENST00000562271 KRTAP12-1P59990 96 aa8.33□□□□□ -1.08
LINC01225-201ENST00000562271 MT1HP80294 61 aa8.2□□□□□ -1.1
LINC01225-201ENST00000562271 R4GN34 69 aa8.13□□□□□ -1.11
LINC01225-201ENST00000562271 LUZP6Q538Z0 58 aa8.11□□□□□ -1.11
LINC01225-201ENST00000562271 M0R2T5 61 aa8.08□□□□□ -1.12
LINC01225-201ENST00000562271 LCE2AQ5TA79 106 aaPredicted RBP8.04□□□□□ -1.12
LINC01225-201ENST00000562271 LORP23490 312 aaPredicted RBP7.98□□□□□ -1.13
LINC01225-201ENST00000562271 PLAC4Q8WY50 150 aa7.97□□□□□ -1.13
LINC01225-201ENST00000562271 KRTAP9-8Q9BYQ0 159 aa7.86□□□□□ -1.15
LINC01225-201ENST00000562271 MT2AP02795 61 aa7.82□□□□□ -1.16
LINC01225-201ENST00000562271 MT1FP04733 61 aa7.82□□□□□ -1.16
LINC01225-201ENST00000562271 FSIP2Q5CZC0 6907 aa7.75□□□□□ -1.17
LINC01225-201ENST00000562271 USH2AO75445 5202 aa7.73□□□□□ -1.17
LINC01225-201ENST00000562271 CAMK2N1Q7Z7J9 78 aa7.72□□□□□ -1.17
LINC01225-201ENST00000562271 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
LINC01225-201ENST00000562271 PP632Q6XCG6 107 aa7.69□□□□□ -1.18
LINC01225-201ENST00000562271 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
LINC01225-201ENST00000562271 KRTAP19-1Q8IUB9 90 aa7.54□□□□□ -1.2
LINC01225-201ENST00000562271 LCE2BO14633 110 aa7.5□□□□□ -1.21
LINC01225-201ENST00000562271 TNP1P09430 55 aa7.44□□□□□ -1.22
LINC01225-201ENST00000562271 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
LINC01225-201ENST00000562271 SPRR5A0A1B0GTR4 108 aa7.4□□□□□ -1.23
LINC01225-201ENST00000562271 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
LINC01225-201ENST00000562271 KRTAP23-1A1A580 65 aa7.36□□□□□ -1.23
LINC01225-201ENST00000562271 KRTAP9-2Q9BYQ4 174 aa7.31□□□□□ -1.24
LINC01225-201ENST00000562271 MT1BP07438 61 aa7.3□□□□□ -1.24
LINC01225-201ENST00000562271 LCE2DQ5TA82 110 aaPredicted RBP7.23□□□□□ -1.25
LINC01225-201ENST00000562271 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
LINC01225-201ENST00000562271 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
LINC01225-201ENST00000562271 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
LINC01225-201ENST00000562271 INE1O15225 51 aa7.06□□□□□ -1.28
LINC01225-201ENST00000562271 KMT2DO14686 5537 aa7.05□□□□□ -1.28
LINC01225-201ENST00000562271 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
LINC01225-201ENST00000562271 MT1XP80297 61 aa7.01□□□□□ -1.29
LINC01225-201ENST00000562271 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
LINC01225-201ENST00000562271 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
LINC01225-201ENST00000562271 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
LINC01225-201ENST00000562271 MACF1Q9UPN3 7388 aaKnown RBP6.87□□□□□ -1.31
LINC01225-201ENST00000562271 KRTAP8-1Q8IUC2 63 aa6.86□□□□□ -1.31
LINC01225-201ENST00000562271 KRTAP10-7P60409 375 aaPredicted RBP6.8□□□□□ -1.32
LINC01225-201ENST00000562271 SYNE2Q8WXH0 6885 aaKnown RBP6.79□□□□□ -1.32
LINC01225-201ENST00000562271 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
LINC01225-201ENST00000562271 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
LINC01225-201ENST00000562271 KRTAP12-3P60328 96 aa6.7□□□□□ -1.34
LINC01225-201ENST00000562271 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
LINC01225-201ENST00000562271 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
LINC01225-201ENST00000562271 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
LINC01225-201ENST00000562271 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.47□□□□□ -1.37
LINC01225-201ENST00000562271 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms