RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CRCT1Q9UGL9 99 aa6.33□□□□□ -1.4
CDH1-204ENST00000562118 A8MUN3 132 aa6.32□□□□□ -1.4
CDH1-204ENST00000562118 KRTAP10-10P60014 251 aa6.3□□□□□ -1.4
CDH1-204ENST00000562118 USH2AO75445 5202 aa6.29□□□□□ -1.4
CDH1-204ENST00000562118 LOC100996750A0A140TA64 210 aa6.29□□□□□ -1.4
CDH1-204ENST00000562118 KRTAP4-6Q9BYQ5 205 aa6.29□□□□□ -1.4
CDH1-204ENST00000562118 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.4
CDH1-204ENST00000562118 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
CDH1-204ENST00000562118 DMAC1Q96GE9 116 aa6.24□□□□□ -1.41
CDH1-204ENST00000562118 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
CDH1-204ENST00000562118 SSPOA2VEC9 5147 aa6.19□□□□□ -1.42
CDH1-204ENST00000562118 H0YAA0 97 aa6.17□□□□□ -1.42
CDH1-204ENST00000562118 NDUFC1O43677 76 aa6.15□□□□□ -1.42
CDH1-204ENST00000562118 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
CDH1-204ENST00000562118 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
CDH1-204ENST00000562118 C20orf197Q8N268 126 aa6.1□□□□□ -1.43
CDH1-204ENST00000562118 SPANXA2-OT1Q8N9U9 137 aa6.1□□□□□ -1.43
CDH1-204ENST00000562118 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
CDH1-204ENST00000562118 COX7CP15954 63 aa6.08□□□□□ -1.44
CDH1-204ENST00000562118 ACYP2P14621 99 aa6.05□□□□□ -1.44
CDH1-204ENST00000562118 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
CDH1-204ENST00000562118 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
CDH1-204ENST00000562118 KRTAP19-6Q3LI70 58 aa6.02□□□□□ -1.45
CDH1-204ENST00000562118 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
CDH1-204ENST00000562118 KRTAP9-7A8MTY7 169 aa5.99□□□□□ -1.45
CDH1-204ENST00000562118 MT1BP07438 61 aa5.98□□□□□ -1.45
CDH1-204ENST00000562118 ADM2Q7Z4H4 148 aa5.98□□□□□ -1.45
CDH1-204ENST00000562118 CYSTM1Q9H1C7 97 aa5.98□□□□□ -1.45
CDH1-204ENST00000562118 H7BZZ5 65 aa5.97□□□□□ -1.45
CDH1-204ENST00000562118 PCP4P48539 62 aa5.94□□□□□ -1.46
CDH1-204ENST00000562118 ANAPC13Q9BS18 74 aa5.93□□□□□ -1.46
CDH1-204ENST00000562118 P0C880 135 aa5.92□□□□□ -1.46
CDH1-204ENST00000562118 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
CDH1-204ENST00000562118 Q5VV11 94 aa5.91□□□□□ -1.46
CDH1-204ENST00000562118 SPTSSBQ8NFR3 76 aa5.91□□□□□ -1.46
CDH1-204ENST00000562118 CHKB-CPT1BH3BT56 60 aa5.87□□□□□ -1.47
CDH1-204ENST00000562118 COA5Q86WW8 74 aa5.85□□□□□ -1.47
CDH1-204ENST00000562118 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
CDH1-204ENST00000562118 R4GN34 69 aa5.8□□□□□ -1.48
CDH1-204ENST00000562118 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
CDH1-204ENST00000562118 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
CDH1-204ENST00000562118 M0QZ58 72 aa5.76□□□□□ -1.49
CDH1-204ENST00000562118 ATP5EP56381 51 aaPredicted RBP5.74□□□□□ -1.49
CDH1-204ENST00000562118 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CDH1-204ENST00000562118 A6NN06 94 aa5.71□□□□□ -1.5
CDH1-204ENST00000562118 TMEM258P61165 79 aa5.67□□□□□ -1.5
CDH1-204ENST00000562118 MT1XP80297 61 aa5.66□□□□□ -1.5
CDH1-204ENST00000562118 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
CDH1-204ENST00000562118 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
CDH1-204ENST00000562118 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
CDH1-204ENST00000562118 LINC01554Q52M75 96 aa5.59□□□□□ -1.51
CDH1-204ENST00000562118 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
CDH1-204ENST00000562118 SEC61GP60059 68 aa5.58□□□□□ -1.52
CDH1-204ENST00000562118 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
CDH1-204ENST00000562118 A0A1B0GU33 70 aa5.53□□□□□ -1.52
CDH1-204ENST00000562118 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
CDH1-204ENST00000562118 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
CDH1-204ENST00000562118 KRTAP12-2P59991 146 aa5.52□□□□□ -1.53
CDH1-204ENST00000562118 A0A1B0GU69 56 aa5.51□□□□□ -1.53
CDH1-204ENST00000562118 LINC01558Q9Y6Z2 57 aa5.5□□□□□ -1.53
CDH1-204ENST00000562118 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
CDH1-204ENST00000562118 LCE3BQ5TA77 95 aa5.45□□□□□ -1.54
CDH1-204ENST00000562118 KRTAP5-9P26371 169 aa5.44□□□□□ -1.54
CDH1-204ENST00000562118 KMT2DO14686 5537 aa5.43□□□□□ -1.54
CDH1-204ENST00000562118 KRTAP9-9Q9BYP9 154 aa5.42□□□□□ -1.54
CDH1-204ENST00000562118 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
CDH1-204ENST00000562118 PRR15LQ9BU68 103 aa5.41□□□□□ -1.54
CDH1-204ENST00000562118 KRTAP12-1P59990 96 aa5.4□□□□□ -1.54
CDH1-204ENST00000562118 KRTAP10-12P60413 245 aa5.4□□□□□ -1.54
CDH1-204ENST00000562118 SVIPQ8NHG7 77 aa5.39□□□□□ -1.55
CDH1-204ENST00000562118 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
CDH1-204ENST00000562118 A0A0D9SG42 100 aa5.37□□□□□ -1.55
CDH1-204ENST00000562118 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
CDH1-204ENST00000562118 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
CDH1-204ENST00000562118 SMIM26A0A096LP01 95 aa5.36□□□□□ -1.55
CDH1-204ENST00000562118 A8MU10 97 aa5.32□□□□□ -1.56
CDH1-204ENST00000562118 CAMK2N1Q7Z7J9 78 aa5.32□□□□□ -1.56
CDH1-204ENST00000562118 Q1T7F1 81 aa5.31□□□□□ -1.56
CDH1-204ENST00000562118 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
CDH1-204ENST00000562118 V9GYY9 64 aa5.28□□□□□ -1.56
CDH1-204ENST00000562118 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
CDH1-204ENST00000562118 UQCR11O14957 56 aa5.27□□□□□ -1.57
CDH1-204ENST00000562118 SPINT4Q6UDR6 99 aa5.27□□□□□ -1.57
CDH1-204ENST00000562118 NEBP20929 6669 aa5.27□□□□□ -1.57
CDH1-204ENST00000562118 KRTAP8-1Q8IUC2 63 aa5.26□□□□□ -1.57
CDH1-204ENST00000562118 KRTAP20-1Q3LI63 56 aa5.22□□□□□ -1.57
CDH1-204ENST00000562118 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
CDH1-204ENST00000562118 PSPHP1O15172 72 aa5.16□□□□□ -1.58
CDH1-204ENST00000562118 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
CDH1-204ENST00000562118 C10orf95Q9H7T3 257 aa5.14□□□□□ -1.59
CDH1-204ENST00000562118 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
CDH1-204ENST00000562118 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
CDH1-204ENST00000562118 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
CDH1-204ENST00000562118 KRTAP19-7Q3SYF9 63 aa5.08□□□□□ -1.6
CDH1-204ENST00000562118 SPRR2EP22531 72 aa5.06□□□□□ -1.6
CDH1-204ENST00000562118 SPRR2BP35325 72 aa5.06□□□□□ -1.6
CDH1-204ENST00000562118 SPRR2AP35326 72 aa5.06□□□□□ -1.6
CDH1-204ENST00000562118 TNP1P09430 55 aa5.02□□□□□ -1.61
CDH1-204ENST00000562118 LCE4AQ5TA78 99 aa5.01□□□□□ -1.61
CDH1-204ENST00000562118 MT1EP04732 61 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms