RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
GINS3-204ENST00000561952 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
GINS3-204ENST00000561952 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
GINS3-204ENST00000561952 C8orf17Q9NRJ1 99 aa4.07□□□□□ -1.76
GINS3-204ENST00000561952 SPINK7P58062 85 aa4.06□□□□□ -1.76
GINS3-204ENST00000561952 WFDC13Q8IUB5 93 aa4.05□□□□□ -1.76
GINS3-204ENST00000561952 KLKP1Q107X0 134 aa4.04□□□□□ -1.76
GINS3-204ENST00000561952 MMP24-AS1A0A0U1RRL7 71 aa4.03□□□□□ -1.76
GINS3-204ENST00000561952 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
GINS3-204ENST00000561952 CASC2Q6XLA1 102 aa4.02□□□□□ -1.77
GINS3-204ENST00000561952 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
GINS3-204ENST00000561952 NDUFS5O43920 106 aa4.01□□□□□ -1.77
GINS3-204ENST00000561952 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
GINS3-204ENST00000561952 NDUFC1O43677 76 aa4□□□□□ -1.77
GINS3-204ENST00000561952 C5orf47Q569G3 176 aa4□□□□□ -1.77
GINS3-204ENST00000561952 TMEM254Q8TBM7 123 aa4□□□□□ -1.77
GINS3-204ENST00000561952 hDV103S1A0JD37 113 aa3.99□□□□□ -1.77
GINS3-204ENST00000561952 H7BZZ5 65 aa3.99□□□□□ -1.77
GINS3-204ENST00000561952 TMEM258P61165 79 aa3.99□□□□□ -1.77
GINS3-204ENST00000561952 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
GINS3-204ENST00000561952 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
GINS3-204ENST00000561952 H3BPC8 53 aa3.97□□□□□ -1.77
GINS3-204ENST00000561952 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
GINS3-204ENST00000561952 IGKV2D-30A0A075B6S6 120 aa3.96□□□□□ -1.78
GINS3-204ENST00000561952 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
GINS3-204ENST00000561952 SNURFQ9Y675 71 aa3.96□□□□□ -1.78
GINS3-204ENST00000561952 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.95□□□□□ -1.78
GINS3-204ENST00000561952 MP68P56378 58 aa3.94□□□□□ -1.78
GINS3-204ENST00000561952 RPS28P62857 69 aaKnown RBP3.94□□□□□ -1.78
GINS3-204ENST00000561952 TRAV22A0A0B4J277 110 aa3.93□□□□□ -1.78
GINS3-204ENST00000561952 H0Y9P7 68 aa3.93□□□□□ -1.78
GINS3-204ENST00000561952 ATP5EP56381 51 aaPredicted RBP3.93□□□□□ -1.78
GINS3-204ENST00000561952 H1FX-AS1Q4G0G2 97 aa3.92□□□□□ -1.78
GINS3-204ENST00000561952 Q5W150 140 aa3.91□□□□□ -1.78
GINS3-204ENST00000561952 C7orf65Q6ZTY9 151 aa3.91□□□□□ -1.78
GINS3-204ENST00000561952 LINC00208Q96KT6 92 aa3.91□□□□□ -1.78
GINS3-204ENST00000561952 C1orf64Q8NEQ6 169 aa3.89□□□□□ -1.79
GINS3-204ENST00000561952 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
GINS3-204ENST00000561952 SPANXA2-OT1Q8N9U9 137 aa3.88□□□□□ -1.79
GINS3-204ENST00000561952 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
GINS3-204ENST00000561952 CYP4F30PQ9H0H9 118 aa3.87□□□□□ -1.79
GINS3-204ENST00000561952 SERP1Q9Y6X1 66 aa3.87□□□□□ -1.79
GINS3-204ENST00000561952 MACF1Q9UPN3 7388 aaKnown RBP3.86□□□□□ -1.79
GINS3-204ENST00000561952 LOC101927531A0A1B0GV80 90 aa3.86□□□□□ -1.79
GINS3-204ENST00000561952 KRTAP23-1A1A580 65 aa3.82□□□□□ -1.8
GINS3-204ENST00000561952 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
GINS3-204ENST00000561952 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
GINS3-204ENST00000561952 S4R3F8 94 aa3.8□□□□□ -1.8
GINS3-204ENST00000561952 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
GINS3-204ENST00000561952 KRTAP5-11Q6L8G4 156 aa3.78□□□□□ -1.8
GINS3-204ENST00000561952 LCA10Q71F78 164 aa3.77□□□□□ -1.81
GINS3-204ENST00000561952 CSAG1Q6PB30 78 aa3.74□□□□□ -1.81
GINS3-204ENST00000561952 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
GINS3-204ENST00000561952 Q5VV11 94 aa3.72□□□□□ -1.81
GINS3-204ENST00000561952 COA5Q86WW8 74 aa3.72□□□□□ -1.81
GINS3-204ENST00000561952 A6NN06 94 aa3.71□□□□□ -1.82
GINS3-204ENST00000561952 MT1BP07438 61 aa3.71□□□□□ -1.82
GINS3-204ENST00000561952 ACYP2P14621 99 aa3.71□□□□□ -1.82
GINS3-204ENST00000561952 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
GINS3-204ENST00000561952 Q1T7F1 81 aa3.7□□□□□ -1.82
GINS3-204ENST00000561952 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
GINS3-204ENST00000561952 A8MUN3 132 aa3.68□□□□□ -1.82
GINS3-204ENST00000561952 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
GINS3-204ENST00000561952 V9GYY9 64 aa3.68□□□□□ -1.82
GINS3-204ENST00000561952 KRTAP19-8Q3LI54 63 aa3.66□□□□□ -1.82
GINS3-204ENST00000561952 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
GINS3-204ENST00000561952 KRTAP10-5P60370 271 aa3.63□□□□□ -1.83
GINS3-204ENST00000561952 LINC01558Q9Y6Z2 57 aa3.63□□□□□ -1.83
GINS3-204ENST00000561952 CHKB-CPT1BH3BT56 60 aa3.6□□□□□ -1.83
GINS3-204ENST00000561952 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
GINS3-204ENST00000561952 ADM2Q7Z4H4 148 aa3.57□□□□□ -1.84
GINS3-204ENST00000561952 NEBP20929 6669 aa3.57□□□□□ -1.84
GINS3-204ENST00000561952 PSPHP1O15172 72 aa3.56□□□□□ -1.84
GINS3-204ENST00000561952 LCE1EQ5T753 118 aa3.56□□□□□ -1.84
GINS3-204ENST00000561952 SPTSSBQ8NFR3 76 aa3.56□□□□□ -1.84
GINS3-204ENST00000561952 PRR15LQ9BU68 103 aa3.56□□□□□ -1.84
GINS3-204ENST00000561952 KMT2DO14686 5537 aa3.54□□□□□ -1.84
GINS3-204ENST00000561952 H0YAA0 97 aa3.52□□□□□ -1.85
GINS3-204ENST00000561952 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
GINS3-204ENST00000561952 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
GINS3-204ENST00000561952 A0A1B0GU69 56 aa3.5□□□□□ -1.85
GINS3-204ENST00000561952 KRTAP5-9P26371 169 aa3.5□□□□□ -1.85
GINS3-204ENST00000561952 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
GINS3-204ENST00000561952 PRO0628Q9UI54 55 aa3.49□□□□□ -1.85
GINS3-204ENST00000561952 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
GINS3-204ENST00000561952 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
GINS3-204ENST00000561952 R4GN34 69 aa3.48□□□□□ -1.85
GINS3-204ENST00000561952 P0C880 135 aa3.47□□□□□ -1.85
GINS3-204ENST00000561952 MT1XP80297 61 aa3.47□□□□□ -1.85
GINS3-204ENST00000561952 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
GINS3-204ENST00000561952 A6NED7 52 aa3.46□□□□□ -1.86
GINS3-204ENST00000561952 M0QZ58 72 aa3.46□□□□□ -1.86
GINS3-204ENST00000561952 SEC61GP60059 68 aa3.46□□□□□ -1.86
GINS3-204ENST00000561952 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
GINS3-204ENST00000561952 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
GINS3-204ENST00000561952 LINC01554Q52M75 96 aa3.45□□□□□ -1.86
GINS3-204ENST00000561952 UQCR11O14957 56 aa3.43□□□□□ -1.86
GINS3-204ENST00000561952 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
GINS3-204ENST00000561952 SPRR2EP22531 72 aa3.42□□□□□ -1.86
GINS3-204ENST00000561952 SPRR2BP35325 72 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms