RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 UQCRQO14949 82 aa3.49□□□□□ -1.85
GABPB1-211ENST00000561010 SPINK7P58062 85 aa3.49□□□□□ -1.85
GABPB1-211ENST00000561010 Q6ZQT0 140 aa3.49□□□□□ -1.85
GABPB1-211ENST00000561010 C8orf87E5RJ46 101 aa3.48□□□□□ -1.85
GABPB1-211ENST00000561010 IGKV3D-7A0A0C4DH55 119 aa3.47□□□□□ -1.85
GABPB1-211ENST00000561010 HIST1H4AP62805 103 aaKnown RBP3.47□□□□□ -1.85
GABPB1-211ENST00000561010 WFDC13Q8IUB5 93 aa3.47□□□□□ -1.85
GABPB1-211ENST00000561010 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
GABPB1-211ENST00000561010 COX7CP15954 63 aa3.46□□□□□ -1.86
GABPB1-211ENST00000561010 CXCL6P80162 114 aa3.46□□□□□ -1.86
GABPB1-211ENST00000561010 SMIM20Q8N5G0 67 aa3.46□□□□□ -1.86
GABPB1-211ENST00000561010 CCDC179H3BU77 68 aa3.45□□□□□ -1.86
GABPB1-211ENST00000561010 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
GABPB1-211ENST00000561010 Q6ZVQ6 151 aa3.44□□□□□ -1.86
GABPB1-211ENST00000561010 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
GABPB1-211ENST00000561010 C8orf17Q9NRJ1 99 aa3.44□□□□□ -1.86
GABPB1-211ENST00000561010 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
GABPB1-211ENST00000561010 J3KT08 172 aa3.42□□□□□ -1.86
GABPB1-211ENST00000561010 NREPQ16612 68 aa3.42□□□□□ -1.86
GABPB1-211ENST00000561010 A8MWP4 228 aa3.41□□□□□ -1.86
GABPB1-211ENST00000561010 NDUFB1O75438 58 aa3.41□□□□□ -1.86
GABPB1-211ENST00000561010 TRAV7A0A075B6U4 112 aa3.4□□□□□ -1.87
GABPB1-211ENST00000561010 A0A087WVE0 104 aa3.4□□□□□ -1.87
GABPB1-211ENST00000561010 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
GABPB1-211ENST00000561010 BPY2O14599 106 aa3.39□□□□□ -1.87
GABPB1-211ENST00000561010 MMP24-AS1A0A0U1RRL7 71 aa3.38□□□□□ -1.87
GABPB1-211ENST00000561010 TMEM258P61165 79 aa3.38□□□□□ -1.87
GABPB1-211ENST00000561010 RPS28P62857 69 aaKnown RBP3.37□□□□□ -1.87
GABPB1-211ENST00000561010 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
GABPB1-211ENST00000561010 PRR15Q8IV56 129 aa3.37□□□□□ -1.87
GABPB1-211ENST00000561010 K7EQZ3 153 aa3.36□□□□□ -1.87
GABPB1-211ENST00000561010 NDUFC1O43677 76 aa3.36□□□□□ -1.87
GABPB1-211ENST00000561010 NDUFS5O43920 106 aa3.36□□□□□ -1.87
GABPB1-211ENST00000561010 KRTAP10-5P60370 271 aa3.36□□□□□ -1.87
GABPB1-211ENST00000561010 MRPL34Q9BQ48 92 aaKnown RBP3.36□□□□□ -1.87
GABPB1-211ENST00000561010 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
GABPB1-211ENST00000561010 Q5W150 140 aa3.35□□□□□ -1.87
GABPB1-211ENST00000561010 TMEM254Q8TBM7 123 aa3.35□□□□□ -1.87
GABPB1-211ENST00000561010 KLKP1Q107X0 134 aa3.34□□□□□ -1.87
GABPB1-211ENST00000561010 OCR1Q9BZK8 76 aa3.34□□□□□ -1.87
GABPB1-211ENST00000561010 hDV103S1A0JD37 113 aa3.33□□□□□ -1.88
GABPB1-211ENST00000561010 C20orf197Q8N268 126 aa3.33□□□□□ -1.88
GABPB1-211ENST00000561010 ATP5EP56381 51 aaPredicted RBP3.32□□□□□ -1.88
GABPB1-211ENST00000561010 KRTAP10-12P60413 245 aa3.32□□□□□ -1.88
GABPB1-211ENST00000561010 C4orf26Q17RF5 130 aa3.32□□□□□ -1.88
GABPB1-211ENST00000561010 Q8N9L7 120 aa3.32□□□□□ -1.88
GABPB1-211ENST00000561010 KRTAP9-6A8MVA2 160 aa3.31□□□□□ -1.88
GABPB1-211ENST00000561010 C5orf47Q569G3 176 aa3.3□□□□□ -1.88
GABPB1-211ENST00000561010 C7orf65Q6ZTY9 151 aa3.3□□□□□ -1.88
GABPB1-211ENST00000561010 HCG22E2RYF7 251 aa3.29□□□□□ -1.88
GABPB1-211ENST00000561010 MT1BP07438 61 aa3.29□□□□□ -1.88
GABPB1-211ENST00000561010 H7BZZ5 65 aa3.28□□□□□ -1.88
GABPB1-211ENST00000561010 SERP1Q9Y6X1 66 aa3.28□□□□□ -1.88
GABPB1-211ENST00000561010 CASC2Q6XLA1 102 aa3.27□□□□□ -1.89
GABPB1-211ENST00000561010 SNURFQ9Y675 71 aa3.27□□□□□ -1.89
GABPB1-211ENST00000561010 A6NN06 94 aa3.26□□□□□ -1.89
GABPB1-211ENST00000561010 H3BPC8 53 aa3.26□□□□□ -1.89
GABPB1-211ENST00000561010 CYSTM1Q9H1C7 97 aa3.26□□□□□ -1.89
GABPB1-211ENST00000561010 MP68P56378 58 aa3.25□□□□□ -1.89
GABPB1-211ENST00000561010 SMIM26A0A096LP01 95 aa3.23□□□□□ -1.89
GABPB1-211ENST00000561010 Q5VV11 94 aa3.23□□□□□ -1.89
GABPB1-211ENST00000561010 LCA10Q71F78 164 aa3.23□□□□□ -1.89
GABPB1-211ENST00000561010 S4R3F8 94 aa3.23□□□□□ -1.89
GABPB1-211ENST00000561010 NEBP20929 6669 aa3.23□□□□□ -1.89
GABPB1-211ENST00000561010 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
GABPB1-211ENST00000561010 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
GABPB1-211ENST00000561010 C1orf64Q8NEQ6 169 aa3.21□□□□□ -1.9
GABPB1-211ENST00000561010 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
GABPB1-211ENST00000561010 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
GABPB1-211ENST00000561010 CSAG1Q6PB30 78 aa3.19□□□□□ -1.9
GABPB1-211ENST00000561010 H0Y9P7 68 aa3.18□□□□□ -1.9
GABPB1-211ENST00000561010 KRTAP20-1Q3LI63 56 aa3.18□□□□□ -1.9
GABPB1-211ENST00000561010 SPANXA2-OT1Q8N9U9 137 aa3.18□□□□□ -1.9
GABPB1-211ENST00000561010 LINC00208Q96KT6 92 aa3.18□□□□□ -1.9
GABPB1-211ENST00000561010 CYP4F30PQ9H0H9 118 aa3.18□□□□□ -1.9
GABPB1-211ENST00000561010 TRAV22A0A0B4J277 110 aa3.17□□□□□ -1.9
GABPB1-211ENST00000561010 SEC61GP60059 68 aa3.15□□□□□ -1.91
GABPB1-211ENST00000561010 V9GYY9 64 aa3.15□□□□□ -1.91
GABPB1-211ENST00000561010 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
GABPB1-211ENST00000561010 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
GABPB1-211ENST00000561010 LOC101927531A0A1B0GV80 90 aa3.12□□□□□ -1.91
GABPB1-211ENST00000561010 Q1T7F1 81 aa3.11□□□□□ -1.91
GABPB1-211ENST00000561010 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
GABPB1-211ENST00000561010 SPRR2FQ96RM1 72 aa3.07□□□□□ -1.92
GABPB1-211ENST00000561010 PRO0628Q9UI54 55 aa3.07□□□□□ -1.92
GABPB1-211ENST00000561010 KMT2DO14686 5537 aa3.07□□□□□ -1.92
GABPB1-211ENST00000561010 ACYP2P14621 99 aa3.06□□□□□ -1.92
GABPB1-211ENST00000561010 SPRR2EP22531 72 aa3.06□□□□□ -1.92
GABPB1-211ENST00000561010 SPRR2BP35325 72 aa3.06□□□□□ -1.92
GABPB1-211ENST00000561010 SPRR2AP35326 72 aa3.06□□□□□ -1.92
GABPB1-211ENST00000561010 A8MU10 97 aa3.05□□□□□ -1.92
GABPB1-211ENST00000561010 MT1XP80297 61 aa3.05□□□□□ -1.92
GABPB1-211ENST00000561010 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
GABPB1-211ENST00000561010 ADM2Q7Z4H4 148 aa3.05□□□□□ -1.92
GABPB1-211ENST00000561010 COA5Q86WW8 74 aa3.05□□□□□ -1.92
GABPB1-211ENST00000561010 CRIPTQ9P021 101 aa3.05□□□□□ -1.92
GABPB1-211ENST00000561010 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
GABPB1-211ENST00000561010 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
GABPB1-211ENST00000561010 A8MUN3 132 aa3.02□□□□□ -1.93
GABPB1-211ENST00000561010 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms