RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 PCOTHQ58A44 107 aa2.87□□□□□ -1.95
ZEB1-220ENST00000560909 Q5W150 140 aa2.87□□□□□ -1.95
ZEB1-220ENST00000560909 OCR1Q9BZK8 76 aa2.87□□□□□ -1.95
ZEB1-220ENST00000560909 PCP4P48539 62 aa2.86□□□□□ -1.95
ZEB1-220ENST00000560909 ATP11AUNQ6ZP68 121 aa2.86□□□□□ -1.95
ZEB1-220ENST00000560909 KRTAP4-1Q9BYQ7 146 aa2.86□□□□□ -1.95
ZEB1-220ENST00000560909 UQCRQO14949 82 aa2.85□□□□□ -1.95
ZEB1-220ENST00000560909 MT3P25713 68 aa2.85□□□□□ -1.95
ZEB1-220ENST00000560909 FAT4Q6V0I7 4981 aa2.83□□□□□ -1.96
ZEB1-220ENST00000560909 SMIM20Q8N5G0 67 aa2.83□□□□□ -1.96
ZEB1-220ENST00000560909 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
ZEB1-220ENST00000560909 A0A0A0MQY5 61 aa2.82□□□□□ -1.96
ZEB1-220ENST00000560909 FAM236AA0A1B0GUQ0 79 aa2.82□□□□□ -1.96
ZEB1-220ENST00000560909 FAM236BA0A1B0GV22 79 aa2.82□□□□□ -1.96
ZEB1-220ENST00000560909 NDUFS5O43920 106 aa2.82□□□□□ -1.96
ZEB1-220ENST00000560909 KRTAP19-2Q3LHN2 52 aa2.82□□□□□ -1.96
ZEB1-220ENST00000560909 TRAV7A0A075B6U4 112 aa2.81□□□□□ -1.96
ZEB1-220ENST00000560909 TRAV22A0A0B4J277 110 aa2.81□□□□□ -1.96
ZEB1-220ENST00000560909 ATOX1O00244 68 aa2.81□□□□□ -1.96
ZEB1-220ENST00000560909 SCGB1A1P11684 91 aa2.81□□□□□ -1.96
ZEB1-220ENST00000560909 SPINK7P58062 85 aa2.81□□□□□ -1.96
ZEB1-220ENST00000560909 C5orf47Q569G3 176 aa2.81□□□□□ -1.96
ZEB1-220ENST00000560909 H3BPC8 53 aa2.8□□□□□ -1.96
ZEB1-220ENST00000560909 HRES1P13985 223 aa2.8□□□□□ -1.96
ZEB1-220ENST00000560909 LOC101927531A0A1B0GV80 90 aa2.79□□□□□ -1.96
ZEB1-220ENST00000560909 SERP2Q8N6R1 65 aa2.79□□□□□ -1.96
ZEB1-220ENST00000560909 CYP4F30PQ9H0H9 118 aa2.79□□□□□ -1.96
ZEB1-220ENST00000560909 H0Y9P7 68 aa2.78□□□□□ -1.96
ZEB1-220ENST00000560909 C7orf65Q6ZTY9 151 aa2.78□□□□□ -1.96
ZEB1-220ENST00000560909 MP68P56378 58 aa2.77□□□□□ -1.97
ZEB1-220ENST00000560909 A0A0U1RQV1 116 aa2.76□□□□□ -1.97
ZEB1-220ENST00000560909 C1orf64Q8NEQ6 169 aa2.76□□□□□ -1.97
ZEB1-220ENST00000560909 LINC00208Q96KT6 92 aa2.75□□□□□ -1.97
ZEB1-220ENST00000560909 COX7CP15954 63 aa2.74□□□□□ -1.97
ZEB1-220ENST00000560909 KLKP1Q107X0 134 aa2.74□□□□□ -1.97
ZEB1-220ENST00000560909 COX6B2Q6YFQ2 88 aa2.73□□□□□ -1.97
ZEB1-220ENST00000560909 ANAPC13Q9BS18 74 aa2.72□□□□□ -1.97
ZEB1-220ENST00000560909 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
ZEB1-220ENST00000560909 C4orf26Q17RF5 130 aa2.71□□□□□ -1.98
ZEB1-220ENST00000560909 C20orf197Q8N268 126 aa2.71□□□□□ -1.98
ZEB1-220ENST00000560909 H1FX-AS1Q4G0G2 97 aa2.7□□□□□ -1.98
ZEB1-220ENST00000560909 SPANXA2-OT1Q8N9U9 137 aa2.7□□□□□ -1.98
ZEB1-220ENST00000560909 A8MUN3 132 aa2.69□□□□□ -1.98
ZEB1-220ENST00000560909 NDUFC1O43677 76 aa2.69□□□□□ -1.98
ZEB1-220ENST00000560909 MT1HP80294 61 aa2.69□□□□□ -1.98
ZEB1-220ENST00000560909 SNURFQ9Y675 71 aa2.69□□□□□ -1.98
ZEB1-220ENST00000560909 H7BZZ5 65 aa2.68□□□□□ -1.98
ZEB1-220ENST00000560909 DMAC1Q96GE9 116 aa2.68□□□□□ -1.98
ZEB1-220ENST00000560909 CYSTM1Q9H1C7 97 aa2.68□□□□□ -1.98
ZEB1-220ENST00000560909 CCDC179H3BU77 68 aa2.67□□□□□ -1.98
ZEB1-220ENST00000560909 FAM236DA0A1B0GTK5 79 aa2.65□□□□□ -1.99
ZEB1-220ENST00000560909 FAM236CP0DP71 79 aa2.65□□□□□ -1.99
ZEB1-220ENST00000560909 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
ZEB1-220ENST00000560909 ACYP2P14621 99 aa2.63□□□□□ -1.99
ZEB1-220ENST00000560909 LCA10Q71F78 164 aa2.62□□□□□ -1.99
ZEB1-220ENST00000560909 S4R3F8 94 aa2.61□□□□□ -1.99
ZEB1-220ENST00000560909 CSAG1Q6PB30 78 aa2.6□□□□□ -1.99
ZEB1-220ENST00000560909 ATP5EP56381 51 aaPredicted RBP2.59□□□□□ -1.99
ZEB1-220ENST00000560909 TMEM258P61165 79 aa2.59□□□□□ -1.99
ZEB1-220ENST00000560909 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
ZEB1-220ENST00000560909 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
ZEB1-220ENST00000560909 H0YAA0 97 aa2.57□□□□□ -2
ZEB1-220ENST00000560909 M0R2T5 61 aa2.57□□□□□ -2
ZEB1-220ENST00000560909 MT2AP02795 61 aa2.57□□□□□ -2
ZEB1-220ENST00000560909 COA5Q86WW8 74 aa2.56□□□□□ -2
ZEB1-220ENST00000560909 MT1FP04733 61 aa2.54□□□□□ -2
ZEB1-220ENST00000560909 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
ZEB1-220ENST00000560909 CHKB-CPT1BH3BT56 60 aa2.52□□□□□ -2.01
ZEB1-220ENST00000560909 SERP1Q9Y6X1 66 aa2.51□□□□□ -2.01
ZEB1-220ENST00000560909 RPS28P62857 69 aaKnown RBP2.5□□□□□ -2.01
ZEB1-220ENST00000560909 KRTAP10-10P60014 251 aa2.49□□□□□ -2.01
ZEB1-220ENST00000560909 CRIPTQ9P021 101 aa2.49□□□□□ -2.01
ZEB1-220ENST00000560909 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
ZEB1-220ENST00000560909 P0C880 135 aa2.48□□□□□ -2.01
ZEB1-220ENST00000560909 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
ZEB1-220ENST00000560909 ADM2Q7Z4H4 148 aa2.48□□□□□ -2.01
ZEB1-220ENST00000560909 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
ZEB1-220ENST00000560909 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
ZEB1-220ENST00000560909 USH2AO75445 5202 aa2.47□□□□□ -2.01
ZEB1-220ENST00000560909 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
ZEB1-220ENST00000560909 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
ZEB1-220ENST00000560909 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
ZEB1-220ENST00000560909 SMIM26A0A096LP01 95 aa2.44□□□□□ -2.02
ZEB1-220ENST00000560909 M0QZ58 72 aa2.43□□□□□ -2.02
ZEB1-220ENST00000560909 Q1T7F1 81 aa2.43□□□□□ -2.02
ZEB1-220ENST00000560909 A0A1B0GU69 56 aa2.41□□□□□ -2.02
ZEB1-220ENST00000560909 SEC61GP60059 68 aa2.41□□□□□ -2.02
ZEB1-220ENST00000560909 Q5VV11 94 aa2.41□□□□□ -2.02
ZEB1-220ENST00000560909 V9GYY9 64 aa2.41□□□□□ -2.02
ZEB1-220ENST00000560909 MT1BP07438 61 aa2.4□□□□□ -2.03
ZEB1-220ENST00000560909 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
ZEB1-220ENST00000560909 R4GN34 69 aa2.4□□□□□ -2.03
ZEB1-220ENST00000560909 A0A1B0GU33 70 aa2.39□□□□□ -2.03
ZEB1-220ENST00000560909 PRR15LQ9BU68 103 aa2.39□□□□□ -2.03
ZEB1-220ENST00000560909 A6NN06 94 aa2.38□□□□□ -2.03
ZEB1-220ENST00000560909 FCGBPQ9Y6R7 5405 aaPredicted RBP2.35□□□□□ -2.03
ZEB1-220ENST00000560909 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
ZEB1-220ENST00000560909 KRTAP19-6Q3LI70 58 aa2.35□□□□□ -2.03
ZEB1-220ENST00000560909 PRAC1Q96KF2 57 aa2.35□□□□□ -2.03
ZEB1-220ENST00000560909 SPATA8Q6RVD6 105 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms