RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
SNRPA1-211ENST00000560433 KRTAP4-1Q9BYQ7 146 aa5.54□□□□□ -1.52
SNRPA1-211ENST00000560433 Q1T7F1 81 aa5.54□□□□□ -1.52
SNRPA1-211ENST00000560433 A8MUN3 132 aa5.53□□□□□ -1.52
SNRPA1-211ENST00000560433 SEC61BP60468 96 aaKnown RBP5.51□□□□□ -1.53
SNRPA1-211ENST00000560433 PRR15LQ9BU68 103 aa5.5□□□□□ -1.53
SNRPA1-211ENST00000560433 RBM12B-AS1Q9P1G2 102 aa5.5□□□□□ -1.53
SNRPA1-211ENST00000560433 LOC100996750A0A140TA64 210 aa5.49□□□□□ -1.53
SNRPA1-211ENST00000560433 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
SNRPA1-211ENST00000560433 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
SNRPA1-211ENST00000560433 RNF213Q63HN8 5207 aa5.46□□□□□ -1.53
SNRPA1-211ENST00000560433 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.53
SNRPA1-211ENST00000560433 Q5VV11 94 aa5.46□□□□□ -1.54
SNRPA1-211ENST00000560433 LCA10Q71F78 164 aa5.46□□□□□ -1.54
SNRPA1-211ENST00000560433 KRTAP3-3Q9BYR6 98 aa5.43□□□□□ -1.54
SNRPA1-211ENST00000560433 S4R3F8 94 aa5.41□□□□□ -1.54
SNRPA1-211ENST00000560433 A0A1B0GU69 56 aa5.4□□□□□ -1.54
SNRPA1-211ENST00000560433 H1FX-AS1Q4G0G2 97 aa5.4□□□□□ -1.54
SNRPA1-211ENST00000560433 FAT4Q6V0I7 4981 aa5.39□□□□□ -1.55
SNRPA1-211ENST00000560433 A8MU10 97 aa5.38□□□□□ -1.55
SNRPA1-211ENST00000560433 BRK1Q8WUW1 75 aa5.38□□□□□ -1.55
SNRPA1-211ENST00000560433 LCE2DQ5TA82 110 aaPredicted RBP5.38□□□□□ -1.55
SNRPA1-211ENST00000560433 SPTSSBQ8NFR3 76 aa5.37□□□□□ -1.55
SNRPA1-211ENST00000560433 A6NED7 52 aa5.35□□□□□ -1.55
SNRPA1-211ENST00000560433 KRTAP19-2Q3LHN2 52 aa5.32□□□□□ -1.56
SNRPA1-211ENST00000560433 KTN1-AS1Q86SY8 53 aa5.27□□□□□ -1.57
SNRPA1-211ENST00000560433 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
SNRPA1-211ENST00000560433 FLGP20930 4061 aaPredicted RBP5.26□□□□□ -1.57
SNRPA1-211ENST00000560433 P0C880 135 aa5.24□□□□□ -1.57
SNRPA1-211ENST00000560433 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
SNRPA1-211ENST00000560433 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
SNRPA1-211ENST00000560433 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
SNRPA1-211ENST00000560433 KRTAP3-2Q9BYR7 98 aa5.23□□□□□ -1.57
SNRPA1-211ENST00000560433 UQCR11O14957 56 aa5.22□□□□□ -1.57
SNRPA1-211ENST00000560433 A0A1B0GU33 70 aa5.22□□□□□ -1.57
SNRPA1-211ENST00000560433 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
SNRPA1-211ENST00000560433 CDC42SE1Q9NRR8 79 aa5.19□□□□□ -1.58
SNRPA1-211ENST00000560433 LCE2CQ5TA81 110 aa5.19□□□□□ -1.58
SNRPA1-211ENST00000560433 H0YAA0 97 aa5.18□□□□□ -1.58
SNRPA1-211ENST00000560433 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
SNRPA1-211ENST00000560433 A0A0D9SG42 100 aa5.12□□□□□ -1.59
SNRPA1-211ENST00000560433 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
SNRPA1-211ENST00000560433 M0R2T5 61 aa5.09□□□□□ -1.59
SNRPA1-211ENST00000560433 MT1HP80294 61 aa5.08□□□□□ -1.6
SNRPA1-211ENST00000560433 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
SNRPA1-211ENST00000560433 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
SNRPA1-211ENST00000560433 M0QZ58 72 aa5.03□□□□□ -1.6
SNRPA1-211ENST00000560433 R4GN34 69 aa5.02□□□□□ -1.61
SNRPA1-211ENST00000560433 A6NN06 94 aa4.97□□□□□ -1.61
SNRPA1-211ENST00000560433 SPINT4Q6UDR6 99 aa4.96□□□□□ -1.62
SNRPA1-211ENST00000560433 KRTAP12-2P59991 146 aa4.95□□□□□ -1.62
SNRPA1-211ENST00000560433 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
SNRPA1-211ENST00000560433 KRTAP12-1P59990 96 aa4.91□□□□□ -1.62
SNRPA1-211ENST00000560433 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.62
SNRPA1-211ENST00000560433 MT2AP02795 61 aa4.89□□□□□ -1.63
SNRPA1-211ENST00000560433 MT1FP04733 61 aa4.89□□□□□ -1.63
SNRPA1-211ENST00000560433 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
SNRPA1-211ENST00000560433 KRTAP10-10P60014 251 aa4.88□□□□□ -1.63
SNRPA1-211ENST00000560433 K7ERS5 55 aa4.88□□□□□ -1.63
SNRPA1-211ENST00000560433 KRTAP19-1Q8IUB9 90 aa4.82□□□□□ -1.64
SNRPA1-211ENST00000560433 CRIPTQ9P021 101 aa4.8□□□□□ -1.64
SNRPA1-211ENST00000560433 LUZP6Q538Z0 58 aa4.77□□□□□ -1.65
SNRPA1-211ENST00000560433 SPRR2GQ9BYE4 73 aa4.76□□□□□ -1.65
SNRPA1-211ENST00000560433 USH2AO75445 5202 aa4.73□□□□□ -1.65
SNRPA1-211ENST00000560433 ROMO1P60602 79 aa4.73□□□□□ -1.65
SNRPA1-211ENST00000560433 CAMK2N1Q7Z7J9 78 aa4.72□□□□□ -1.65
SNRPA1-211ENST00000560433 KRTAP9-3Q9BYQ3 159 aa4.71□□□□□ -1.66
SNRPA1-211ENST00000560433 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
SNRPA1-211ENST00000560433 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
SNRPA1-211ENST00000560433 PLAC4Q8WY50 150 aa4.65□□□□□ -1.66
SNRPA1-211ENST00000560433 KRTAP9-2Q9BYQ4 174 aa4.65□□□□□ -1.66
SNRPA1-211ENST00000560433 MT1BP07438 61 aa4.62□□□□□ -1.67
SNRPA1-211ENST00000560433 LCE2BO14633 110 aa4.62□□□□□ -1.67
SNRPA1-211ENST00000560433 FSIP2Q5CZC0 6907 aa4.61□□□□□ -1.67
SNRPA1-211ENST00000560433 KRTAP19-8Q3LI54 63 aa4.61□□□□□ -1.67
SNRPA1-211ENST00000560433 KRTAP25-1Q3LHN0 102 aa4.56□□□□□ -1.68
SNRPA1-211ENST00000560433 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
SNRPA1-211ENST00000560433 MT1XP80297 61 aa4.5□□□□□ -1.69
SNRPA1-211ENST00000560433 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
SNRPA1-211ENST00000560433 KRTAP4-8A0A0G2JLE6 195 aa4.48□□□□□ -1.69
SNRPA1-211ENST00000560433 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.47□□□□□ -1.69
SNRPA1-211ENST00000560433 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.69
SNRPA1-211ENST00000560433 TNP1P09430 55 aa4.45□□□□□ -1.7
SNRPA1-211ENST00000560433 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
SNRPA1-211ENST00000560433 KMT2DO14686 5537 aa4.43□□□□□ -1.7
SNRPA1-211ENST00000560433 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
SNRPA1-211ENST00000560433 CRCT1Q9UGL9 99 aa4.42□□□□□ -1.7
SNRPA1-211ENST00000560433 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SNRPA1-211ENST00000560433 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
SNRPA1-211ENST00000560433 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
SNRPA1-211ENST00000560433 KRTAP5-3Q6L8H2 238 aa4.36□□□□□ -1.71
SNRPA1-211ENST00000560433 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
SNRPA1-211ENST00000560433 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
SNRPA1-211ENST00000560433 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
SNRPA1-211ENST00000560433 PP632Q6XCG6 107 aa4.26□□□□□ -1.73
SNRPA1-211ENST00000560433 KRTAP9-9Q9BYP9 154 aa4.24□□□□□ -1.73
SNRPA1-211ENST00000560433 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
SNRPA1-211ENST00000560433 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
SNRPA1-211ENST00000560433 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.74
SNRPA1-211ENST00000560433 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms