RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 LCE1DQ5T752 114 aa7.12□□□□□ -1.27
SNRPA1-210ENST00000560383 C1orf64Q8NEQ6 169 aa7.1□□□□□ -1.27
SNRPA1-210ENST00000560383 CYP4F30PQ9H0H9 118 aa7.09□□□□□ -1.27
SNRPA1-210ENST00000560383 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
SNRPA1-210ENST00000560383 TRAV22A0A0B4J277 110 aa7.07□□□□□ -1.28
SNRPA1-210ENST00000560383 LOC101927531A0A1B0GV80 90 aa7.04□□□□□ -1.28
SNRPA1-210ENST00000560383 MT-ATP8P03928 68 aa7.04□□□□□ -1.28
SNRPA1-210ENST00000560383 S4R3F8 94 aa7.04□□□□□ -1.28
SNRPA1-210ENST00000560383 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
SNRPA1-210ENST00000560383 UQCRQO14949 82 aa7.02□□□□□ -1.29
SNRPA1-210ENST00000560383 IMUPQ9GZP8 106 aa7.02□□□□□ -1.29
SNRPA1-210ENST00000560383 LCA10Q71F78 164 aa7.01□□□□□ -1.29
SNRPA1-210ENST00000560383 CSAG1Q6PB30 78 aa7□□□□□ -1.29
SNRPA1-210ENST00000560383 ATOX1O00244 68 aa6.98□□□□□ -1.29
SNRPA1-210ENST00000560383 KRTAP4-7Q9BYR0 210 aa6.98□□□□□ -1.29
SNRPA1-210ENST00000560383 H0Y9P7 68 aa6.96□□□□□ -1.3
SNRPA1-210ENST00000560383 SCGB1A1P11684 91 aa6.96□□□□□ -1.3
SNRPA1-210ENST00000560383 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
SNRPA1-210ENST00000560383 FAM236AA0A1B0GUQ0 79 aa6.92□□□□□ -1.3
SNRPA1-210ENST00000560383 FAM236BA0A1B0GV22 79 aa6.92□□□□□ -1.3
SNRPA1-210ENST00000560383 KRTAP6-3Q3LI67 103 aa6.91□□□□□ -1.3
SNRPA1-210ENST00000560383 MP68P56378 58 aa6.89□□□□□ -1.31
SNRPA1-210ENST00000560383 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
SNRPA1-210ENST00000560383 LINC00208Q96KT6 92 aa6.86□□□□□ -1.31
SNRPA1-210ENST00000560383 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
SNRPA1-210ENST00000560383 A8MUN3 132 aa6.84□□□□□ -1.31
SNRPA1-210ENST00000560383 SMIM20Q8N5G0 67 aa6.84□□□□□ -1.31
SNRPA1-210ENST00000560383 KLKP1Q107X0 134 aa6.83□□□□□ -1.32
SNRPA1-210ENST00000560383 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
SNRPA1-210ENST00000560383 H3BPC8 53 aa6.81□□□□□ -1.32
SNRPA1-210ENST00000560383 KRTAP19-8Q3LI54 63 aa6.81□□□□□ -1.32
SNRPA1-210ENST00000560383 NDUFC1O43677 76 aa6.79□□□□□ -1.32
SNRPA1-210ENST00000560383 MT1BP07438 61 aa6.79□□□□□ -1.32
SNRPA1-210ENST00000560383 H0YAA0 97 aa6.77□□□□□ -1.33
SNRPA1-210ENST00000560383 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
SNRPA1-210ENST00000560383 Q5VV11 94 aa6.77□□□□□ -1.33
SNRPA1-210ENST00000560383 A6NN06 94 aa6.76□□□□□ -1.33
SNRPA1-210ENST00000560383 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
SNRPA1-210ENST00000560383 MUC12Q9UKN1 5478 aa6.73□□□□□ -1.33
SNRPA1-210ENST00000560383 SERP2Q8N6R1 65 aa6.71□□□□□ -1.34
SNRPA1-210ENST00000560383 NEBP20929 6669 aa6.69□□□□□ -1.34
SNRPA1-210ENST00000560383 KRTAP4-11Q9BYQ6 195 aa6.68□□□□□ -1.34
SNRPA1-210ENST00000560383 KRTAP4-2Q9BYR5 136 aa6.68□□□□□ -1.34
SNRPA1-210ENST00000560383 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
SNRPA1-210ENST00000560383 DMAC1Q96GE9 116 aa6.67□□□□□ -1.34
SNRPA1-210ENST00000560383 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
SNRPA1-210ENST00000560383 C20orf197Q8N268 126 aa6.64□□□□□ -1.35
SNRPA1-210ENST00000560383 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
SNRPA1-210ENST00000560383 COX7CP15954 63 aa6.6□□□□□ -1.35
SNRPA1-210ENST00000560383 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
SNRPA1-210ENST00000560383 ANAPC13Q9BS18 74 aa6.56□□□□□ -1.36
SNRPA1-210ENST00000560383 KRTAP5-9P26371 169 aa6.55□□□□□ -1.36
SNRPA1-210ENST00000560383 KMT2DO14686 5537 aa6.54□□□□□ -1.36
SNRPA1-210ENST00000560383 P0C880 135 aa6.51□□□□□ -1.37
SNRPA1-210ENST00000560383 SPANXA2-OT1Q8N9U9 137 aa6.5□□□□□ -1.37
SNRPA1-210ENST00000560383 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
SNRPA1-210ENST00000560383 ACYP2P14621 99 aa6.49□□□□□ -1.37
SNRPA1-210ENST00000560383 R4GN34 69 aa6.46□□□□□ -1.38
SNRPA1-210ENST00000560383 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
SNRPA1-210ENST00000560383 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
SNRPA1-210ENST00000560383 H7BZZ5 65 aa6.42□□□□□ -1.38
SNRPA1-210ENST00000560383 CHKB-CPT1BH3BT56 60 aa6.4□□□□□ -1.38
SNRPA1-210ENST00000560383 CCDC179H3BU77 68 aa6.4□□□□□ -1.38
SNRPA1-210ENST00000560383 M0QZ58 72 aa6.4□□□□□ -1.38
SNRPA1-210ENST00000560383 MT1XP80297 61 aa6.39□□□□□ -1.39
SNRPA1-210ENST00000560383 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
SNRPA1-210ENST00000560383 PLAC4Q8WY50 150 aa6.39□□□□□ -1.39
SNRPA1-210ENST00000560383 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
SNRPA1-210ENST00000560383 COA5Q86WW8 74 aa6.31□□□□□ -1.4
SNRPA1-210ENST00000560383 LINC01554Q52M75 96 aa6.28□□□□□ -1.4
SNRPA1-210ENST00000560383 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
SNRPA1-210ENST00000560383 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
SNRPA1-210ENST00000560383 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
SNRPA1-210ENST00000560383 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
SNRPA1-210ENST00000560383 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
SNRPA1-210ENST00000560383 SPRR2EP22531 72 aa6.22□□□□□ -1.41
SNRPA1-210ENST00000560383 SPRR2BP35325 72 aa6.22□□□□□ -1.41
SNRPA1-210ENST00000560383 SPRR2AP35326 72 aa6.22□□□□□ -1.41
SNRPA1-210ENST00000560383 KRTAP8-1Q8IUC2 63 aa6.21□□□□□ -1.42
SNRPA1-210ENST00000560383 TMEM258P61165 79 aa6.19□□□□□ -1.42
SNRPA1-210ENST00000560383 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
SNRPA1-210ENST00000560383 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
SNRPA1-210ENST00000560383 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
SNRPA1-210ENST00000560383 SEC61GP60059 68 aa6.08□□□□□ -1.44
SNRPA1-210ENST00000560383 KRTAP10-7P60409 375 aaPredicted RBP6.07□□□□□ -1.44
SNRPA1-210ENST00000560383 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
SNRPA1-210ENST00000560383 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
SNRPA1-210ENST00000560383 PCP4P48539 62 aa6.05□□□□□ -1.44
SNRPA1-210ENST00000560383 KRTAP2-2Q9BYT5 123 aa6.04□□□□□ -1.44
SNRPA1-210ENST00000560383 KRTAP2-1Q9BYU5 128 aa6.04□□□□□ -1.44
SNRPA1-210ENST00000560383 SPRR2DP22532 72 aa6.01□□□□□ -1.45
SNRPA1-210ENST00000560383 A0A1B0GU69 56 aa5.99□□□□□ -1.45
SNRPA1-210ENST00000560383 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
SNRPA1-210ENST00000560383 A0A1B0GU33 70 aa5.93□□□□□ -1.46
SNRPA1-210ENST00000560383 CAMK2N1Q7Z7J9 78 aa5.93□□□□□ -1.46
SNRPA1-210ENST00000560383 PRR15LQ9BU68 103 aa5.91□□□□□ -1.46
SNRPA1-210ENST00000560383 LINC01558Q9Y6Z2 57 aa5.91□□□□□ -1.46
SNRPA1-210ENST00000560383 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
SNRPA1-210ENST00000560383 A0A0D9SG42 100 aa5.88□□□□□ -1.47
SNRPA1-210ENST00000560383 KRTAP12-1P59990 96 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms