RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 PCP4P48539 62 aa6.65□□□□□ -1.34
HMBOX1-213ENST00000560269 S4R3F8 94 aa6.65□□□□□ -1.34
HMBOX1-213ENST00000560269 ACYP2P14621 99 aa6.64□□□□□ -1.35
HMBOX1-213ENST00000560269 LCA10Q71F78 164 aa6.63□□□□□ -1.35
HMBOX1-213ENST00000560269 M0R2T5 61 aa6.6□□□□□ -1.35
HMBOX1-213ENST00000560269 ATP5EP56381 51 aaPredicted RBP6.57□□□□□ -1.36
HMBOX1-213ENST00000560269 TMEM258P61165 79 aa6.57□□□□□ -1.36
HMBOX1-213ENST00000560269 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
HMBOX1-213ENST00000560269 KRTAP10-6P60371 365 aaPredicted RBP6.53□□□□□ -1.36
HMBOX1-213ENST00000560269 COA5Q86WW8 74 aa6.52□□□□□ -1.37
HMBOX1-213ENST00000560269 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
HMBOX1-213ENST00000560269 CHKB-CPT1BH3BT56 60 aa6.5□□□□□ -1.37
HMBOX1-213ENST00000560269 LCE2BO14633 110 aa6.47□□□□□ -1.37
HMBOX1-213ENST00000560269 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
HMBOX1-213ENST00000560269 KRTAP9-8Q9BYQ0 159 aa6.45□□□□□ -1.38
HMBOX1-213ENST00000560269 MT2AP02795 61 aa6.4□□□□□ -1.38
HMBOX1-213ENST00000560269 H0YAA0 97 aa6.39□□□□□ -1.39
HMBOX1-213ENST00000560269 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
HMBOX1-213ENST00000560269 MT1FP04733 61 aa6.35□□□□□ -1.39
HMBOX1-213ENST00000560269 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
HMBOX1-213ENST00000560269 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
HMBOX1-213ENST00000560269 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
HMBOX1-213ENST00000560269 P0C880 135 aa6.24□□□□□ -1.41
HMBOX1-213ENST00000560269 KRTAP9-3Q9BYQ3 159 aa6.23□□□□□ -1.41
HMBOX1-213ENST00000560269 CRIPTQ9P021 101 aa6.22□□□□□ -1.41
HMBOX1-213ENST00000560269 SEC61GP60059 68 aa6.2□□□□□ -1.42
HMBOX1-213ENST00000560269 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
HMBOX1-213ENST00000560269 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
HMBOX1-213ENST00000560269 A0A1B0GU69 56 aa6.16□□□□□ -1.42
HMBOX1-213ENST00000560269 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
HMBOX1-213ENST00000560269 SPRR2GQ9BYE4 73 aa6.15□□□□□ -1.42
HMBOX1-213ENST00000560269 Q1T7F1 81 aa6.12□□□□□ -1.43
HMBOX1-213ENST00000560269 PRR15LQ9BU68 103 aa6.12□□□□□ -1.43
HMBOX1-213ENST00000560269 V9GYY9 64 aa6.12□□□□□ -1.43
HMBOX1-213ENST00000560269 R4GN34 69 aa6.11□□□□□ -1.43
HMBOX1-213ENST00000560269 M0QZ58 72 aa6.09□□□□□ -1.43
HMBOX1-213ENST00000560269 A0A1B0GU33 70 aa6.06□□□□□ -1.44
HMBOX1-213ENST00000560269 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
HMBOX1-213ENST00000560269 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
HMBOX1-213ENST00000560269 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
HMBOX1-213ENST00000560269 Q5VV11 94 aa6.02□□□□□ -1.45
HMBOX1-213ENST00000560269 PSPHP1O15172 72 aa5.99□□□□□ -1.45
HMBOX1-213ENST00000560269 KRTAP9-6A0A140TA67 174 aa5.97□□□□□ -1.45
HMBOX1-213ENST00000560269 MT1BP07438 61 aa5.97□□□□□ -1.45
HMBOX1-213ENST00000560269 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
HMBOX1-213ENST00000560269 USH2AO75445 5202 aa5.97□□□□□ -1.45
HMBOX1-213ENST00000560269 LINC01554Q52M75 96 aa5.95□□□□□ -1.46
HMBOX1-213ENST00000560269 UQCR11O14957 56 aa5.94□□□□□ -1.46
HMBOX1-213ENST00000560269 A6NN06 94 aa5.91□□□□□ -1.46
HMBOX1-213ENST00000560269 FSIP2Q5CZC0 6907 aa5.87□□□□□ -1.47
HMBOX1-213ENST00000560269 A0A0D9SG42 100 aa5.86□□□□□ -1.47
HMBOX1-213ENST00000560269 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
HMBOX1-213ENST00000560269 SSPOA2VEC9 5147 aa5.85□□□□□ -1.47
HMBOX1-213ENST00000560269 A8MU10 97 aa5.84□□□□□ -1.47
HMBOX1-213ENST00000560269 MIR22HGQ0VDD5 57 aa5.84□□□□□ -1.47
HMBOX1-213ENST00000560269 A6NED7 52 aa5.81□□□□□ -1.48
HMBOX1-213ENST00000560269 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
HMBOX1-213ENST00000560269 CRCT1Q9UGL9 99 aa5.8□□□□□ -1.48
HMBOX1-213ENST00000560269 KRTAP12-1P59990 96 aa5.79□□□□□ -1.48
HMBOX1-213ENST00000560269 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
HMBOX1-213ENST00000560269 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
HMBOX1-213ENST00000560269 KRTAP10-5P60370 271 aa5.73□□□□□ -1.49
HMBOX1-213ENST00000560269 MT1XP80297 61 aa5.71□□□□□ -1.5
HMBOX1-213ENST00000560269 CDC42SE1Q9NRR8 79 aa5.69□□□□□ -1.5
HMBOX1-213ENST00000560269 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
HMBOX1-213ENST00000560269 PRO2289Q9P1D8 64 aa5.68□□□□□ -1.5
HMBOX1-213ENST00000560269 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
HMBOX1-213ENST00000560269 K7ERS5 55 aa5.62□□□□□ -1.51
HMBOX1-213ENST00000560269 BRK1Q8WUW1 75 aa5.54□□□□□ -1.52
HMBOX1-213ENST00000560269 C10orf95Q9H7T3 257 aa5.5□□□□□ -1.53
HMBOX1-213ENST00000560269 KRTAP10-7P60409 375 aaPredicted RBP5.45□□□□□ -1.54
HMBOX1-213ENST00000560269 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
HMBOX1-213ENST00000560269 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
HMBOX1-213ENST00000560269 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
HMBOX1-213ENST00000560269 TNP1P09430 55 aa5.38□□□□□ -1.55
HMBOX1-213ENST00000560269 LOC100996750A0A140TA64 210 aa5.35□□□□□ -1.55
HMBOX1-213ENST00000560269 ROMO1P60602 79 aa5.35□□□□□ -1.55
HMBOX1-213ENST00000560269 KRTAP4-6Q9BYQ5 205 aa5.35□□□□□ -1.55
HMBOX1-213ENST00000560269 KRTAP25-1Q3LHN0 102 aa5.32□□□□□ -1.56
HMBOX1-213ENST00000560269 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
HMBOX1-213ENST00000560269 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
HMBOX1-213ENST00000560269 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
HMBOX1-213ENST00000560269 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
HMBOX1-213ENST00000560269 KMT2DO14686 5537 aa5.27□□□□□ -1.57
HMBOX1-213ENST00000560269 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
HMBOX1-213ENST00000560269 PMAIP1Q13794 54 aa5.23□□□□□ -1.57
HMBOX1-213ENST00000560269 KRTAP8-1Q8IUC2 63 aa5.23□□□□□ -1.57
HMBOX1-213ENST00000560269 KRTAP6-3Q3LI67 103 aa5.2□□□□□ -1.58
HMBOX1-213ENST00000560269 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
HMBOX1-213ENST00000560269 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
HMBOX1-213ENST00000560269 KRTAP5-9P26371 169 aa5.17□□□□□ -1.58
HMBOX1-213ENST00000560269 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
HMBOX1-213ENST00000560269 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
HMBOX1-213ENST00000560269 KRTAP19-5Q3LI72 72 aa5.08□□□□□ -1.6
HMBOX1-213ENST00000560269 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
HMBOX1-213ENST00000560269 MT1EP04732 61 aa5.02□□□□□ -1.61
HMBOX1-213ENST00000560269 KRTAP12-3P60328 96 aa5□□□□□ -1.61
HMBOX1-213ENST00000560269 MUC12Q9UKN1 5478 aa4.99□□□□□ -1.61
HMBOX1-213ENST00000560269 KTN1-AS1Q86SY8 53 aa4.94□□□□□ -1.62
HMBOX1-213ENST00000560269 LCE1AQ5T7P2 110 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms