RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 ATP11AUNQ6ZP68 121 aa7.65□□□□□ -1.18
RABGGTA-212ENST00000559974 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
RABGGTA-212ENST00000559974 SPTSSBQ8NFR3 76 aa7.62□□□□□ -1.19
RABGGTA-212ENST00000559974 RPL37P61927 97 aaKnown RBP7.61□□□□□ -1.19
RABGGTA-212ENST00000559974 XP32Q5T750 250 aa7.6□□□□□ -1.19
RABGGTA-212ENST00000559974 PMAIP1Q13794 54 aa7.59□□□□□ -1.19
RABGGTA-212ENST00000559974 LRP2P98164 4655 aa7.59□□□□□ -1.19
RABGGTA-212ENST00000559974 COX6B2Q6YFQ2 88 aa7.58□□□□□ -1.2
RABGGTA-212ENST00000559974 UQCR11O14957 56 aa7.54□□□□□ -1.2
RABGGTA-212ENST00000559974 SPATA8Q6RVD6 105 aa7.52□□□□□ -1.21
RABGGTA-212ENST00000559974 A6NN06 94 aa7.5□□□□□ -1.21
RABGGTA-212ENST00000559974 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
RABGGTA-212ENST00000559974 TPRXLQ17RH7 258 aa7.42□□□□□ -1.22
RABGGTA-212ENST00000559974 KTN1-AS1Q86SY8 53 aa7.4□□□□□ -1.23
RABGGTA-212ENST00000559974 UBR4Q5T4S7 5183 aa7.39□□□□□ -1.23
RABGGTA-212ENST00000559974 H3BS24 57 aa7.37□□□□□ -1.23
RABGGTA-212ENST00000559974 A0A1B0GU33 70 aa7.35□□□□□ -1.23
RABGGTA-212ENST00000559974 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
RABGGTA-212ENST00000559974 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
RABGGTA-212ENST00000559974 H0YAA0 97 aa7.32□□□□□ -1.24
RABGGTA-212ENST00000559974 S4R3F8 94 aa7.32□□□□□ -1.24
RABGGTA-212ENST00000559974 MUC17Q685J3 4493 aa7.3□□□□□ -1.24
RABGGTA-212ENST00000559974 MUC2Q02817 5179 aa7.28□□□□□ -1.24
RABGGTA-212ENST00000559974 RNF213Q63HN8 5207 aa7.25□□□□□ -1.25
RABGGTA-212ENST00000559974 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
RABGGTA-212ENST00000559974 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
RABGGTA-212ENST00000559974 KRTAP4-1Q9BYQ7 146 aa7.2□□□□□ -1.26
RABGGTA-212ENST00000559974 KRTAP3-2Q9BYR7 98 aa7.18□□□□□ -1.26
RABGGTA-212ENST00000559974 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.27
RABGGTA-212ENST00000559974 ADM2Q7Z4H4 148 aa7.11□□□□□ -1.27
RABGGTA-212ENST00000559974 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
RABGGTA-212ENST00000559974 PRAC1Q96KF2 57 aa7.09□□□□□ -1.27
RABGGTA-212ENST00000559974 P0C880 135 aa7.09□□□□□ -1.27
RABGGTA-212ENST00000559974 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
RABGGTA-212ENST00000559974 K7ERS5 55 aa7.06□□□□□ -1.28
RABGGTA-212ENST00000559974 A0A0D9SG42 100 aa7□□□□□ -1.29
RABGGTA-212ENST00000559974 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
RABGGTA-212ENST00000559974 KRTAP19-2Q3LHN2 52 aa6.93□□□□□ -1.3
RABGGTA-212ENST00000559974 M0QZ58 72 aa6.91□□□□□ -1.3
RABGGTA-212ENST00000559974 A0A0A0MQY5 61 aa6.89□□□□□ -1.31
RABGGTA-212ENST00000559974 LCE2CQ5TA81 110 aa6.88□□□□□ -1.31
RABGGTA-212ENST00000559974 FLGP20930 4061 aaPredicted RBP6.86□□□□□ -1.31
RABGGTA-212ENST00000559974 ROMO1P60602 79 aa6.86□□□□□ -1.31
RABGGTA-212ENST00000559974 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
RABGGTA-212ENST00000559974 KRTAP12-1P59990 96 aa6.82□□□□□ -1.32
RABGGTA-212ENST00000559974 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
RABGGTA-212ENST00000559974 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
RABGGTA-212ENST00000559974 SPINT4Q6UDR6 99 aa6.79□□□□□ -1.32
RABGGTA-212ENST00000559974 R4GN34 69 aa6.77□□□□□ -1.33
RABGGTA-212ENST00000559974 MT1HP80294 61 aa6.73□□□□□ -1.33
RABGGTA-212ENST00000559974 CRIPTQ9P021 101 aa6.73□□□□□ -1.33
RABGGTA-212ENST00000559974 LORP23490 312 aaPredicted RBP6.71□□□□□ -1.34
RABGGTA-212ENST00000559974 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
RABGGTA-212ENST00000559974 M0R2T5 61 aa6.57□□□□□ -1.36
RABGGTA-212ENST00000559974 C10orf95Q9H7T3 257 aa6.55□□□□□ -1.36
RABGGTA-212ENST00000559974 KRTAP9-8Q9BYQ0 159 aa6.44□□□□□ -1.38
RABGGTA-212ENST00000559974 CAMK2N1Q7Z7J9 78 aa6.4□□□□□ -1.39
RABGGTA-212ENST00000559974 MT2AP02795 61 aa6.39□□□□□ -1.39
RABGGTA-212ENST00000559974 MT1FP04733 61 aa6.37□□□□□ -1.39
RABGGTA-212ENST00000559974 SPRR2GQ9BYE4 73 aa6.31□□□□□ -1.4
RABGGTA-212ENST00000559974 KRTAP10-10P60014 251 aa6.29□□□□□ -1.4
RABGGTA-212ENST00000559974 KRTAP19-1Q8IUB9 90 aa6.27□□□□□ -1.41
RABGGTA-212ENST00000559974 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.42
RABGGTA-212ENST00000559974 PLAC4Q8WY50 150 aa6.19□□□□□ -1.42
RABGGTA-212ENST00000559974 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
RABGGTA-212ENST00000559974 TNP1P09430 55 aa6.15□□□□□ -1.43
RABGGTA-212ENST00000559974 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.43
RABGGTA-212ENST00000559974 LCE2BO14633 110 aa6.14□□□□□ -1.43
RABGGTA-212ENST00000559974 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
RABGGTA-212ENST00000559974 KRTAP9-2Q9BYQ4 174 aa6.12□□□□□ -1.43
RABGGTA-212ENST00000559974 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
RABGGTA-212ENST00000559974 USH2AO75445 5202 aa6.11□□□□□ -1.43
RABGGTA-212ENST00000559974 KRTAP19-8Q3LI54 63 aa6.07□□□□□ -1.44
RABGGTA-212ENST00000559974 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
RABGGTA-212ENST00000559974 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
RABGGTA-212ENST00000559974 MT1BP07438 61 aa5.98□□□□□ -1.45
RABGGTA-212ENST00000559974 LUZP6Q538Z0 58 aa5.92□□□□□ -1.46
RABGGTA-212ENST00000559974 KRTAP10-5P60370 271 aa5.88□□□□□ -1.47
RABGGTA-212ENST00000559974 MT1XP80297 61 aa5.87□□□□□ -1.47
RABGGTA-212ENST00000559974 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
RABGGTA-212ENST00000559974 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
RABGGTA-212ENST00000559974 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
RABGGTA-212ENST00000559974 KRTAP9-6A0A140TA67 174 aa5.78□□□□□ -1.48
RABGGTA-212ENST00000559974 FCGBPQ9Y6R7 5405 aaPredicted RBP5.76□□□□□ -1.49
RABGGTA-212ENST00000559974 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
RABGGTA-212ENST00000559974 PRO2289Q9P1D8 64 aa5.74□□□□□ -1.49
RABGGTA-212ENST00000559974 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.49
RABGGTA-212ENST00000559974 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
RABGGTA-212ENST00000559974 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
RABGGTA-212ENST00000559974 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
RABGGTA-212ENST00000559974 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
RABGGTA-212ENST00000559974 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
RABGGTA-212ENST00000559974 KMT2DO14686 5537 aa5.5□□□□□ -1.53
RABGGTA-212ENST00000559974 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.42□□□□□ -1.54
RABGGTA-212ENST00000559974 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
RABGGTA-212ENST00000559974 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
RABGGTA-212ENST00000559974 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
RABGGTA-212ENST00000559974 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
RABGGTA-212ENST00000559974 KRTAP9-7A8MTY7 169 aa5.24□□□□□ -1.57
RABGGTA-212ENST00000559974 KRTAP19-7Q3SYF9 63 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 270.9 ms