RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 FAM236BA0A1B0GV22 79 aa9.04□□□□□ -0.96
SHF-205ENST00000559566 CSAG1Q6PB30 78 aa9.04□□□□□ -0.96
SHF-205ENST00000559566 H3BPC8 53 aa9.01□□□□□ -0.97
SHF-205ENST00000559566 TRAV7A0A075B6U4 112 aa8.94□□□□□ -0.98
SHF-205ENST00000559566 A8MUN3 132 aa8.94□□□□□ -0.98
SHF-205ENST00000559566 KRTAP19-1Q8IUB9 90 aa8.9□□□□□ -0.98
SHF-205ENST00000559566 SMIM20Q8N5G0 67 aa8.89□□□□□ -0.99
SHF-205ENST00000559566 NDUFC1O43677 76 aa8.86□□□□□ -0.99
SHF-205ENST00000559566 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
SHF-205ENST00000559566 FCGBPQ9Y6R7 5405 aaPredicted RBP8.81□□□□□ -1
SHF-205ENST00000559566 SNURFQ9Y675 71 aa8.79□□□□□ -1
SHF-205ENST00000559566 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
SHF-205ENST00000559566 KRTAP19-6Q3LI70 58 aa8.75□□□□□ -1.01
SHF-205ENST00000559566 H0YAA0 97 aa8.74□□□□□ -1.01
SHF-205ENST00000559566 SERP2Q8N6R1 65 aa8.73□□□□□ -1.01
SHF-205ENST00000559566 MT1BP07438 61 aa8.71□□□□□ -1.02
SHF-205ENST00000559566 C20orf197Q8N268 126 aa8.71□□□□□ -1.02
SHF-205ENST00000559566 KRTAP19-8Q3LI54 63 aa8.69□□□□□ -1.02
SHF-205ENST00000559566 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
SHF-205ENST00000559566 ACYP2P14621 99 aa8.63□□□□□ -1.03
SHF-205ENST00000559566 CRIPTQ9P021 101 aa8.63□□□□□ -1.03
SHF-205ENST00000559566 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
SHF-205ENST00000559566 Q5VV11 94 aa8.61□□□□□ -1.03
SHF-205ENST00000559566 P0C880 135 aa8.59□□□□□ -1.03
SHF-205ENST00000559566 KRTAP3-2Q9BYR7 98 aa8.58□□□□□ -1.04
SHF-205ENST00000559566 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
SHF-205ENST00000559566 COX7CP15954 63 aa8.55□□□□□ -1.04
SHF-205ENST00000559566 CYSTM1Q9H1C7 97 aa8.51□□□□□ -1.05
SHF-205ENST00000559566 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
SHF-205ENST00000559566 MACF1Q9UPN3 7388 aaKnown RBP8.44□□□□□ -1.06
SHF-205ENST00000559566 KRTAP9-7A8MTY7 169 aa8.41□□□□□ -1.06
SHF-205ENST00000559566 SPTSSBQ8NFR3 76 aa8.41□□□□□ -1.06
SHF-205ENST00000559566 A6NN06 94 aa8.4□□□□□ -1.06
SHF-205ENST00000559566 H7BZZ5 65 aa8.4□□□□□ -1.06
SHF-205ENST00000559566 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
SHF-205ENST00000559566 R4GN34 69 aa8.39□□□□□ -1.07
SHF-205ENST00000559566 M0QZ58 72 aa8.38□□□□□ -1.07
SHF-205ENST00000559566 ANAPC13Q9BS18 74 aa8.37□□□□□ -1.07
SHF-205ENST00000559566 COA5Q86WW8 74 aa8.36□□□□□ -1.07
SHF-205ENST00000559566 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
SHF-205ENST00000559566 CCDC179H3BU77 68 aa8.28□□□□□ -1.08
SHF-205ENST00000559566 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
SHF-205ENST00000559566 MT1XP80297 61 aa8.22□□□□□ -1.09
SHF-205ENST00000559566 PLAC4Q8WY50 150 aa8.21□□□□□ -1.1
SHF-205ENST00000559566 KRTAP13-4Q3LI77 160 aa8.17□□□□□ -1.1
SHF-205ENST00000559566 KRTAP6-3Q3LI67 103 aa8.12□□□□□ -1.11
SHF-205ENST00000559566 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
SHF-205ENST00000559566 SEC61GP60059 68 aa7.99□□□□□ -1.13
SHF-205ENST00000559566 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
SHF-205ENST00000559566 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
SHF-205ENST00000559566 KMT2DO14686 5537 aa7.95□□□□□ -1.14
SHF-205ENST00000559566 SPATA8Q6RVD6 105 aa7.93□□□□□ -1.14
SHF-205ENST00000559566 A0A1B0GU33 70 aa7.91□□□□□ -1.14
SHF-205ENST00000559566 KRTAP12-2P59991 146 aa7.9□□□□□ -1.14
SHF-205ENST00000559566 MUC12Q9UKN1 5478 aa7.88□□□□□ -1.15
SHF-205ENST00000559566 TMEM258P61165 79 aa7.88□□□□□ -1.15
SHF-205ENST00000559566 A0A0D9SG42 100 aa7.87□□□□□ -1.15
SHF-205ENST00000559566 A0A1B0GU69 56 aa7.87□□□□□ -1.15
SHF-205ENST00000559566 KRTAP5-9P26371 169 aa7.87□□□□□ -1.15
SHF-205ENST00000559566 KRTAP10-7P60409 375 aaPredicted RBP7.86□□□□□ -1.15
SHF-205ENST00000559566 NEBP20929 6669 aa7.81□□□□□ -1.16
SHF-205ENST00000559566 KRTAP4-8A0A0G2JLE6 195 aa7.81□□□□□ -1.16
SHF-205ENST00000559566 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
SHF-205ENST00000559566 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
SHF-205ENST00000559566 KRTAP12-1P59990 96 aa7.75□□□□□ -1.17
SHF-205ENST00000559566 CAMK2N1Q7Z7J9 78 aa7.75□□□□□ -1.17
SHF-205ENST00000559566 LINC01558Q9Y6Z2 57 aa7.74□□□□□ -1.17
SHF-205ENST00000559566 KRTAP8-1Q8IUC2 63 aa7.73□□□□□ -1.17
SHF-205ENST00000559566 MDN1Q9NU22 5596 aa7.72□□□□□ -1.17
SHF-205ENST00000559566 A8MU10 97 aa7.72□□□□□ -1.17
SHF-205ENST00000559566 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
SHF-205ENST00000559566 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
SHF-205ENST00000559566 SMIM26A0A096LP01 95 aa7.64□□□□□ -1.19
SHF-205ENST00000559566 PRR15LQ9BU68 103 aa7.64□□□□□ -1.19
SHF-205ENST00000559566 SPRR2EP22531 72 aa7.52□□□□□ -1.21
SHF-205ENST00000559566 SPRR2BP35325 72 aa7.52□□□□□ -1.21
SHF-205ENST00000559566 SPRR2AP35326 72 aa7.52□□□□□ -1.21
SHF-205ENST00000559566 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
SHF-205ENST00000559566 UQCR11O14957 56 aa7.44□□□□□ -1.22
SHF-205ENST00000559566 PCP4P48539 62 aa7.43□□□□□ -1.22
SHF-205ENST00000559566 C10orf95Q9H7T3 257 aa7.4□□□□□ -1.22
SHF-205ENST00000559566 PSPHP1O15172 72 aa7.38□□□□□ -1.23
SHF-205ENST00000559566 Q1T7F1 81 aa7.38□□□□□ -1.23
SHF-205ENST00000559566 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
SHF-205ENST00000559566 KRTAP19-7Q3SYF9 63 aa7.35□□□□□ -1.23
SHF-205ENST00000559566 V9GYY9 64 aa7.34□□□□□ -1.23
SHF-205ENST00000559566 MIR22HGQ0VDD5 57 aa7.33□□□□□ -1.24
SHF-205ENST00000559566 MT1EP04732 61 aa7.26□□□□□ -1.25
SHF-205ENST00000559566 SPRR2DP22532 72 aa7.25□□□□□ -1.25
SHF-205ENST00000559566 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
SHF-205ENST00000559566 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
SHF-205ENST00000559566 TNP1P09430 55 aa7.22□□□□□ -1.25
SHF-205ENST00000559566 KRTAP19-5Q3LI72 72 aa7.22□□□□□ -1.25
SHF-205ENST00000559566 RPS28P62857 69 aaKnown RBP7.21□□□□□ -1.26
SHF-205ENST00000559566 LCE3AQ5TA76 89 aa7.2□□□□□ -1.26
SHF-205ENST00000559566 KRTAP19-3Q7Z4W3 81 aa7.11□□□□□ -1.27
SHF-205ENST00000559566 LCE5AQ5TCM9 118 aa7.1□□□□□ -1.27
SHF-205ENST00000559566 A6NED7 52 aa7.09□□□□□ -1.27
SHF-205ENST00000559566 LCE3BQ5TA77 95 aa7.04□□□□□ -1.28
SHF-205ENST00000559566 K7ERS5 55 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms